| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175453
Identifier: 126175453
GI number: 126175453
Start: 3813993
End: 3814811
Strand: Reverse
Name: 126175453
Synonym: Sbal_3253
Alternate gene names: NA
Gene position: 3814811-3813993 (Counterclockwise)
Preceding gene: 126175454
Following gene: 126175452
Centisome position: 74.4
GC content: 47.13
Gene sequence:
>819_bases ATGAAATTACGTCTTATTGCATTACTTAGCACACTTTGTATTAGCCCGTTGGCAAGCAGCCACGACAGATGGATTTTACC TAGCCACTTTAACGTTTCGGCCGAAAGCCAAGAAGCCGTGTGGATAACCTCTGATGTGTCTGCCAGCAATCAAGTGTTTA TGATGGATAAACCTTTCAGCGCCAGTGACGTACGTGTGTTACTGCCTGATGGTGAGTCAAGCTCTCCAAGCTCAAGTTAT ACCGGCGGCCGTAAGTCGGTATTTGATGTGCAGTTGCTGCAAGATGGCACCTATAAGTTCGAGAAAGAAGTTACGCCGCG TTATTTCTCCCGCTATAAAGTGAAAGGCAAAGAAGGCTTTGTCCGCAGTCGTTTAGATAAAAAAGCGACCGCCGCTGTCA TGCCAAAGGGCGCCTCTGAATTAGAAGGTTCTTTAAATGTGTCGCGGGTGGAAACCTACGTAACCCGAAATAAGCCGACG GATAAGGTTTTGGCTCCTAAGGGCGAGTACTTGGAACTAGTCCCTGTAACCCATCCAGCGGATATCGTTGAAAATGAACC CGCCACATTGCAGTTTGTTTATGACGGCAAACCCGTTGCAGGTGTGAGTGTTGCGATTATGAAAGACGGCAGCCTATACC GAAACAAGCCTGAAGAAATTGCTTTAACCTCAGATAAAGACGGTAAAGTGGCCATGACCTTGCCTGCGGCGGGACGTTAT CTTTTGCATGCATCTATTGAACGTCCAAGCTCAGACACATCCCTTGCCGATAAAACCGTCAGTGAGATTTTCCTTACGTT TGAAGCTGGACTTGAATAG
Upstream 100 bases:
>100_bases TGAAACCGGCGTTATCGACATACGCTTAAGTGGCATGGCTCGCTGAGCCTGCTACTGAATATATTGCCCGTACATTACTC GTTAAACTTAAGGAAAAGGC
Downstream 100 bases:
>100_bases GATTCAGTCTTCCGCTCAAGTGAGTAAGCGTTATAAGTGACTGAGTGTTAAAAATGATTTAGCGTTTATAAATGACGTAG CGTTCACCGTTAAATGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MKLRLIALLSTLCISPLASSHDRWILPSHFNVSAESQEAVWITSDVSASNQVFMMDKPFSASDVRVLLPDGESSSPSSSY TGGRKSVFDVQLLQDGTYKFEKEVTPRYFSRYKVKGKEGFVRSRLDKKATAAVMPKGASELEGSLNVSRVETYVTRNKPT DKVLAPKGEYLELVPVTHPADIVENEPATLQFVYDGKPVAGVSVAIMKDGSLYRNKPEEIALTSDKDGKVAMTLPAAGRY LLHASIERPSSDTSLADKTVSEIFLTFEAGLE
Sequences:
>Translated_272_residues MKLRLIALLSTLCISPLASSHDRWILPSHFNVSAESQEAVWITSDVSASNQVFMMDKPFSASDVRVLLPDGESSSPSSSY TGGRKSVFDVQLLQDGTYKFEKEVTPRYFSRYKVKGKEGFVRSRLDKKATAAVMPKGASELEGSLNVSRVETYVTRNKPT DKVLAPKGEYLELVPVTHPADIVENEPATLQFVYDGKPVAGVSVAIMKDGSLYRNKPEEIALTSDKDGKVAMTLPAAGRY LLHASIERPSSDTSLADKTVSEIFLTFEAGLE >Mature_272_residues MKLRLIALLSTLCISPLASSHDRWILPSHFNVSAESQEAVWITSDVSASNQVFMMDKPFSASDVRVLLPDGESSSPSSSY TGGRKSVFDVQLLQDGTYKFEKEVTPRYFSRYKVKGKEGFVRSRLDKKATAAVMPKGASELEGSLNVSRVETYVTRNKPT DKVLAPKGEYLELVPVTHPADIVENEPATLQFVYDGKPVAGVSVAIMKDGSLYRNKPEEIALTSDKDGKVAMTLPAAGRY LLHASIERPSSDTSLADKTVSEIFLTFEAGLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29800; Mature: 29800
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRLIALLSTLCISPLASSHDRWILPSHFNVSAESQEAVWITSDVSASNQVFMMDKPFS CEEHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCC ASDVRVLLPDGESSSPSSSYTGGRKSVFDVQLLQDGTYKFEKEVTPRYFSRYKVKGKEGF CCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCCHHHHHEEEECCCCCH VRSRLDKKATAAVMPKGASELEGSLNVSRVETYVTRNKPTDKVLAPKGEYLELVPVTHPA HHHHHHHHHHEEECCCCHHHHCCCCCHHHEEEEEECCCCCCCEECCCCCEEEEEECCCCH DIVENEPATLQFVYDGKPVAGVSVAIMKDGSLYRNKPEEIALTSDKDGKVAMTLPAAGRY HHHCCCCCEEEEEECCCCCCCEEEEEEECCCHHCCCCCEEEEECCCCCEEEEEECCCCEE LLHASIERPSSDTSLADKTVSEIFLTFEAGLE EEEEECCCCCCCCHHHHHHHHHEEEEEECCCC >Mature Secondary Structure MKLRLIALLSTLCISPLASSHDRWILPSHFNVSAESQEAVWITSDVSASNQVFMMDKPFS CEEHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCC ASDVRVLLPDGESSSPSSSYTGGRKSVFDVQLLQDGTYKFEKEVTPRYFSRYKVKGKEGF CCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCCHHHHHEEEECCCCCH VRSRLDKKATAAVMPKGASELEGSLNVSRVETYVTRNKPTDKVLAPKGEYLELVPVTHPA HHHHHHHHHHEEECCCCHHHHCCCCCHHHEEEEEECCCCCCCEECCCCCEEEEEECCCCH DIVENEPATLQFVYDGKPVAGVSVAIMKDGSLYRNKPEEIALTSDKDGKVAMTLPAAGRY HHHCCCCCEEEEEECCCCCCCEEEEEEECCCHHCCCCCEEEEECCCCCEEEEEECCCCEE LLHASIERPSSDTSLADKTVSEIFLTFEAGLE EEEEECCCCCCCCHHHHHHHHHEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA