| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is yeeI [C]
Identifier: 126175210
GI number: 126175210
Start: 3535166
End: 3535990
Strand: Direct
Name: yeeI [C]
Synonym: Sbal_3008
Alternate gene names: 126175210
Gene position: 3535166-3535990 (Clockwise)
Preceding gene: 126175209
Following gene: 126175211
Centisome position: 68.95
GC content: 47.52
Gene sequence:
>825_bases ATGCTCGCCATTGTTATCACGCTTATCCTCGGAGTCGGGGCAATCGCTTGGCTACTTTCAAGTCGTTGGCGCAAAACCTT GCACCGCCGCCGAGTCACGGCCAAACCCTTTCCAAAAGAATGGCGCAGCATTCTCAAAAAAAGACTGCCTTACTTCCATG CGTTACCGACAGATTTACAGCTACAGCTCAAACGGCTTATCCAAATCTTCATCGATGAAAAGGAGTTTGTTGGCTGCGAT GATTTCGAGATCACCGATGAAGTGAGAGTCACTATCGCAGCACAGGCGTGCCTCCTGCTGCTCAATCGAAAAACAGACTT TTACCCCAAACTGAAACAAATTTTGGTCTATCCCGATGCCTTTATCGTTAATAATCAACATAGAGACACGAGCGGTATTG TGTGGGAACAACGCAATGTGCTGGCGGGCGAATCTTGGGAATACGGCAAAGTGGTACTCTCGTGGAAAAATACCTTAGAC GGCGCCGCCGATCCCCACGATGGCAATAATGTCGTGATCCACGAGTTTGCCCATCAGCTCGATCAAGAAGACGGCCAAGC CAATGGCGCGCCGATACTGCAACATTTTGCCGATTACAGCACTTGGTCCGAAGTACTAAGCAAGGCTTTCACCCAATTAC AGCACAGCGCAAACTTTGGCATACCCTCAATATTTAATTACTATGGTGCGACGAATCCCGCTGAATTTTTTGCCGTTATT ACTGAAGTCTTTTTTGAAAAGCCAGAGGATTTCTACCAACAACACCCAGACTTGTATCGGGAACTGAGCCGCTTTTATCA ACTCGATCCGATAAACTGGCATTAA
Upstream 100 bases:
>100_bases CGGCGGCAGAAACGTTTCTTTTTTCAGCAAAGGATTGAGTTAAGTCCTCTTCACCCCCATTAGCTAATACTAAGTTAATC AGGATCAGGTCAGGGAAAGT
Downstream 100 bases:
>100_bases CCCATAAAAGTAGAGGCACACTAAATGCTCAAAGACACTCATGCATTCGCAGTTAAAGGCGCCACTGTTAATCGCCCCGC TAATATGAGTCGCGCGACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLAIVITLILGVGAIAWLLSSRWRKTLHRRRVTAKPFPKEWRSILKKRLPYFHALPTDLQLQLKRLIQIFIDEKEFVGCD DFEITDEVRVTIAAQACLLLLNRKTDFYPKLKQILVYPDAFIVNNQHRDTSGIVWEQRNVLAGESWEYGKVVLSWKNTLD GAADPHDGNNVVIHEFAHQLDQEDGQANGAPILQHFADYSTWSEVLSKAFTQLQHSANFGIPSIFNYYGATNPAEFFAVI TEVFFEKPEDFYQQHPDLYRELSRFYQLDPINWH
Sequences:
>Translated_274_residues MLAIVITLILGVGAIAWLLSSRWRKTLHRRRVTAKPFPKEWRSILKKRLPYFHALPTDLQLQLKRLIQIFIDEKEFVGCD DFEITDEVRVTIAAQACLLLLNRKTDFYPKLKQILVYPDAFIVNNQHRDTSGIVWEQRNVLAGESWEYGKVVLSWKNTLD GAADPHDGNNVVIHEFAHQLDQEDGQANGAPILQHFADYSTWSEVLSKAFTQLQHSANFGIPSIFNYYGATNPAEFFAVI TEVFFEKPEDFYQQHPDLYRELSRFYQLDPINWH >Mature_274_residues MLAIVITLILGVGAIAWLLSSRWRKTLHRRRVTAKPFPKEWRSILKKRLPYFHALPTDLQLQLKRLIQIFIDEKEFVGCD DFEITDEVRVTIAAQACLLLLNRKTDFYPKLKQILVYPDAFIVNNQHRDTSGIVWEQRNVLAGESWEYGKVVLSWKNTLD GAADPHDGNNVVIHEFAHQLDQEDGQANGAPILQHFADYSTWSEVLSKAFTQLQHSANFGIPSIFNYYGATNPAEFFAVI TEVFFEKPEDFYQQHPDLYRELSRFYQLDPINWH
Specific function: Unknown
COG id: COG3228
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mtfA family [H]
Homologues:
Organism=Escherichia coli, GI87082014, Length=236, Percent_Identity=32.2033898305085, Blast_Score=120, Evalue=8e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010384 [H]
Pfam domain/function: PF06167 DUF980 [H]
EC number: NA
Molecular weight: Translated: 31837; Mature: 31837
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAIVITLILGVGAIAWLLSSRWRKTLHRRRVTAKPFPKEWRSILKKRLPYFHALPTDLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHCCCCHHH LQLKRLIQIFIDEKEFVGCDDFEITDEVRVTIAAQACLLLLNRKTDFYPKLKQILVYPDA HHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCE FIVNNQHRDTSGIVWEQRNVLAGESWEYGKVVLSWKNTLDGAADPHDGNNVVIHEFAHQL EEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEHHHHHHHH DQEDGQANGAPILQHFADYSTWSEVLSKAFTQLQHSANFGIPSIFNYYGATNPAEFFAVI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHH TEVFFEKPEDFYQQHPDLYRELSRFYQLDPINWH HHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLAIVITLILGVGAIAWLLSSRWRKTLHRRRVTAKPFPKEWRSILKKRLPYFHALPTDLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHCCCCHHH LQLKRLIQIFIDEKEFVGCDDFEITDEVRVTIAAQACLLLLNRKTDFYPKLKQILVYPDA HHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCE FIVNNQHRDTSGIVWEQRNVLAGESWEYGKVVLSWKNTLDGAADPHDGNNVVIHEFAHQL EEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEHHHHHHHH DQEDGQANGAPILQHFADYSTWSEVLSKAFTQLQHSANFGIPSIFNYYGATNPAEFFAVI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHH TEVFFEKPEDFYQQHPDLYRELSRFYQLDPINWH HHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]