| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175158
Identifier: 126175158
GI number: 126175158
Start: 3468581
End: 3469909
Strand: Direct
Name: 126175158
Synonym: Sbal_2956
Alternate gene names: NA
Gene position: 3468581-3469909 (Clockwise)
Preceding gene: 126175157
Following gene: 126175159
Centisome position: 67.65
GC content: 41.08
Gene sequence:
>1329_bases ATGACCGAGCTATTTGCGTCTAATCTCAATATTATCGTCAAGCGTTGGCCTATTGTAGCAGCTGCGGTCAAAAGCCAAAC TATCAATGAATTAGATGCCCACCTTGTCAACGGTCGCAATCAAACTATCAGTGTCAATGGCATTCAACTCAGCAGCCGTC ATGACCGCCTTGCCGAAGCCCAGCTCTTTATCAGCACATTACCTGCAGATGCAACTCACGTAACCGTCTACGGTGTCGGT ATGGGAGATGTACCAAGTTTACTTATCGATAATCCACAGTATCTTTCAATTGATGTTTGCATTTTAAATCTCAGCGTTTT TGCCCTCCTCATCAGTTACACAGATCAAAGCGAATGGTTAAAGCATCCAAACATTAATTTAACGGCGCTTCCAAGCGCAA AGTTAAATTTTCCTAATATTGCAATTACGCCAGATCTCACTCTTGTCAGTGATGAAAATGCCACTCTCAGAGACTTATTA GTCATGGAGCTCAATCGTGAGTTCTCTAATCAACGACATCAGTCTGATGATCCTGCAATATTAAAACGCTTCGAGGATAA CCAACTTTATATTACTCATGATCCTGATGCCGCGAGCTTAATAAATAGTCATAGTAGCTATAAAGCTATCGTGATTGGCT CGGGTCCTTCTTTAGAAGAGCATTATGATTATCTGCAACAAATTAGTTCAAGTTCCCATAGGCCACTCATCATAGCGGCC GATACTGCATTACGTGGTTTACTTCACAATAATATAAAACCAGATATTGTGATCTGCATTGACGGATTGATAGGTGAATA CCATTTACCGCTAGCCTCGACTCATGACATCAATCTTGTTTATTTTCCCCGAGTTGATCCAGTGGTACTTAATGCTTGGT TAGGCCAAAGATTTATTGCCTATGGAGGCAGTCAAATATACGACCAGCTCGCTTCTCGATATCCCAGACTAAGACTGTTC ACGAGTGGAAGCGTCATTCATCCGGCAATTGATTTAGCGATCAAATTAAAGGCAAAAGAAATTACCCTATTAGGGTGTGA TTTTTGTTATTGCAATAACAAGAGTCATGCATTCTGGAATGATCACAAATTTGGTCAAAACGATATAAAAGAACAAATAT GGGTTAATGCGGTTATTCAGAAGGTGAAGGAAGCTAAACACTGGTTGATCAATGGCAAAGGCCAACGGATAGCGACGGAT CTAAACCTAAGAGCATATCTCAGACACTTGGAGCGTTACATCGCCAAGCATCCAGAAGTAAAGTTTTACCAAGCGAGTTT ATCAGGCGCTAAAATTCGCGGTTCTCAGTATAAGGACCTCATATTATGA
Upstream 100 bases:
>100_bases GCCGCCTCCTAAGCGGCCGATCGGGGTTCGAGTCCCTGTGGAGAGACCAGATAGTGACCTTGGTGATATCAAACTCACAG AAATCTTCCGGAGAAACGGA
Downstream 100 bases:
>100_bases GCTTAAGTCTACAAGATTCACTGCGGCAAACGGCAGGTTTATTTAGACTCGGTCAAGAAGCAAAGGCTTCAGTAGAGTTA CGGTTATGTCTTGATAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MTELFASNLNIIVKRWPIVAAAVKSQTINELDAHLVNGRNQTISVNGIQLSSRHDRLAEAQLFISTLPADATHVTVYGVG MGDVPSLLIDNPQYLSIDVCILNLSVFALLISYTDQSEWLKHPNINLTALPSAKLNFPNIAITPDLTLVSDENATLRDLL VMELNREFSNQRHQSDDPAILKRFEDNQLYITHDPDAASLINSHSSYKAIVIGSGPSLEEHYDYLQQISSSSHRPLIIAA DTALRGLLHNNIKPDIVICIDGLIGEYHLPLASTHDINLVYFPRVDPVVLNAWLGQRFIAYGGSQIYDQLASRYPRLRLF TSGSVIHPAIDLAIKLKAKEITLLGCDFCYCNNKSHAFWNDHKFGQNDIKEQIWVNAVIQKVKEAKHWLINGKGQRIATD LNLRAYLRHLERYIAKHPEVKFYQASLSGAKIRGSQYKDLIL
Sequences:
>Translated_442_residues MTELFASNLNIIVKRWPIVAAAVKSQTINELDAHLVNGRNQTISVNGIQLSSRHDRLAEAQLFISTLPADATHVTVYGVG MGDVPSLLIDNPQYLSIDVCILNLSVFALLISYTDQSEWLKHPNINLTALPSAKLNFPNIAITPDLTLVSDENATLRDLL VMELNREFSNQRHQSDDPAILKRFEDNQLYITHDPDAASLINSHSSYKAIVIGSGPSLEEHYDYLQQISSSSHRPLIIAA DTALRGLLHNNIKPDIVICIDGLIGEYHLPLASTHDINLVYFPRVDPVVLNAWLGQRFIAYGGSQIYDQLASRYPRLRLF TSGSVIHPAIDLAIKLKAKEITLLGCDFCYCNNKSHAFWNDHKFGQNDIKEQIWVNAVIQKVKEAKHWLINGKGQRIATD LNLRAYLRHLERYIAKHPEVKFYQASLSGAKIRGSQYKDLIL >Mature_441_residues TELFASNLNIIVKRWPIVAAAVKSQTINELDAHLVNGRNQTISVNGIQLSSRHDRLAEAQLFISTLPADATHVTVYGVGM GDVPSLLIDNPQYLSIDVCILNLSVFALLISYTDQSEWLKHPNINLTALPSAKLNFPNIAITPDLTLVSDENATLRDLLV MELNREFSNQRHQSDDPAILKRFEDNQLYITHDPDAASLINSHSSYKAIVIGSGPSLEEHYDYLQQISSSSHRPLIIAAD TALRGLLHNNIKPDIVICIDGLIGEYHLPLASTHDINLVYFPRVDPVVLNAWLGQRFIAYGGSQIYDQLASRYPRLRLFT SGSVIHPAIDLAIKLKAKEITLLGCDFCYCNNKSHAFWNDHKFGQNDIKEQIWVNAVIQKVKEAKHWLINGKGQRIATDL NLRAYLRHLERYIAKHPEVKFYQASLSGAKIRGSQYKDLIL
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49642; Mature: 49511
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELFASNLNIIVKRWPIVAAAVKSQTINELDAHLVNGRNQTISVNGIQLSSRHDRLAEA CCCCHHCCCEEEEEECCCCEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHH QLFISTLPADATHVTVYGVGMGDVPSLLIDNPQYLSIDVCILNLSVFALLISYTDQSEWL HHHEEECCCCCEEEEEEEECCCCCCHHEECCCCEEEEEEEEHHHHHHHHHHHCCCCHHHH KHPNINLTALPSAKLNFPNIAITPDLTLVSDENATLRDLLVMELNREFSNQRHQSDDPAI CCCCCCEEECCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHH LKRFEDNQLYITHDPDAASLINSHSSYKAIVIGSGPSLEEHYDYLQQISSSSHRPLIIAA HHCCCCCEEEEEECCCHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEC DTALRGLLHNNIKPDIVICIDGLIGEYHLPLASTHDINLVYFPRVDPVVLNAWLGQRFIA CHHHHHHHHCCCCCCEEEEEECCCCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH YGGSQIYDQLASRYPRLRLFTSGSVIHPAIDLAIKLKAKEITLLGCDFCYCNNKSHAFWN CCCHHHHHHHHHCCCEEEEEECCCEECCEEEEEEEEEEEEEEEEEEEEEEECCCCCCEEC DHKFGQNDIKEQIWVNAVIQKVKEAKHWLINGKGQRIATDLNLRAYLRHLERYIAKHPEV CCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCE KFYQASLSGAKIRGSQYKDLIL EEEEECCCCCEECCCCCCCCCC >Mature Secondary Structure TELFASNLNIIVKRWPIVAAAVKSQTINELDAHLVNGRNQTISVNGIQLSSRHDRLAEA CCCHHCCCEEEEEECCCCEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHH QLFISTLPADATHVTVYGVGMGDVPSLLIDNPQYLSIDVCILNLSVFALLISYTDQSEWL HHHEEECCCCCEEEEEEEECCCCCCHHEECCCCEEEEEEEEHHHHHHHHHHHCCCCHHHH KHPNINLTALPSAKLNFPNIAITPDLTLVSDENATLRDLLVMELNREFSNQRHQSDDPAI CCCCCCEEECCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHH LKRFEDNQLYITHDPDAASLINSHSSYKAIVIGSGPSLEEHYDYLQQISSSSHRPLIIAA HHCCCCCEEEEEECCCHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEC DTALRGLLHNNIKPDIVICIDGLIGEYHLPLASTHDINLVYFPRVDPVVLNAWLGQRFIA CHHHHHHHHCCCCCCEEEEEECCCCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH YGGSQIYDQLASRYPRLRLFTSGSVIHPAIDLAIKLKAKEITLLGCDFCYCNNKSHAFWN CCCHHHHHHHHHCCCEEEEEECCCEECCEEEEEEEEEEEEEEEEEEEEEEECCCCCCEEC DHKFGQNDIKEQIWVNAVIQKVKEAKHWLINGKGQRIATDLNLRAYLRHLERYIAKHPEV CCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCE KFYQASLSGAKIRGSQYKDLIL EEEEECCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA