| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175157
Identifier: 126175157
GI number: 126175157
Start: 3467232
End: 3468398
Strand: Direct
Name: 126175157
Synonym: Sbal_2955
Alternate gene names: NA
Gene position: 3467232-3468398 (Clockwise)
Preceding gene: 126175154
Following gene: 126175158
Centisome position: 67.62
GC content: 44.47
Gene sequence:
>1167_bases ATGCACATACCACGTTCAGCTTCGCTCATCATTTTGAGCCTTGCACTGCTGTCTTTACCTATTCGAGCCGAATGGATGGA AGCCAGTGGTGAAGCGACTATTATCAATGGTAATACGGCTCAAGCAAGGGAAGAAGCGATTAATCAAGCCGTTAGCTACG CGACATTAAGCACAGGCATTCAAATCTCCAGTGAACAACAAACATCTAACGGAAACCTTACACAGAATAACTTCGCGATA AATCGCAACGCCCAAGCCATCAGCATCCAACTCGTTAGCGAACGAATCCAGGGAAACAAAATTTATGTGTCCCTACGACT CGATCTAAATGATGATCCTACGCAGCAGTGTCCAAATGGACAATTAAAGGCTGCTATTCTAATCCCTCAAGCACAAATCA AAGATCGTACTCAGCTCAGATACGGACAGCTTTCAGGCTTTGAAGAAGTGATCTCAGAAAAATTAGGCAGTGTTATAGAA GATTACTCTTCCACAGGTTTTAGCCACACTCACGCTAAAGAGCTGCTCGACATTAAACAAGATCTAGTGGATATTCGCGG TTATCGACTCCCAAGCTGGCTCAGTGAAATTACCGACAGCCAATATATCCTCCAACCACAAATTATGGATATCTCAATGG AGCCAGTGCAGGCAACCTTCCTAGGATTTTGGGATGAAGCTCCACTCAGGCAATTCCAGTTCAAACTTAGCCTTTATCAT GGGATCAGTGGCGAAGAAGTCTGGAGTAAAAGCTACAGCACATCAGCGCCATGGGAATTTGAAGAACAAGCCATTATTGC CCCTAATACTGACAGATTCTGGCGTTCATCCTATGGCAAAAATATTACTAAGTTAATGCAACAGGCTACCCATGATTTAG ACAGCACACTCAATTGCAGACCCTTACTCGGCCAAGTCGTGAGCCGCCAAGCGGACAGGATCATTTTAAATCTCGGCCGT AAACATGGCATTCGTGTCGGGGATAAATTCCAAGTCGTATTACAGCAAAACCTACCCGATCGACTGAATGAAATGCGCGC CGTCGCAACCAAAAGCCGAGCCACGGTAAAAATCGAACAAGTGAGTGAAGAAAGCTCTACAGCAGTACTTTTAGACCAAA ATGCAGCTTACAATGTGCAGATAAACGACATAGCGCTTAAGATTTAA
Upstream 100 bases:
>100_bases GTCAGGCATGAAATTTGCTTTGTCGGTATATTAGGTTAAGTGTCAGGAAACTGGCTCGATTAGCAAGCTCGCCAATAGCT TAGCGATAAGGATTGTATTG
Downstream 100 bases:
>100_bases GCAACTAAATCATAAGCCTTTTAATCAGAGATAAAACCAGTATAATCACTGTCGTCTCTCTATAGCTCAACAGGATAGAG CAGCCGCCTCCTAAGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MHIPRSASLIILSLALLSLPIRAEWMEASGEATIINGNTAQAREEAINQAVSYATLSTGIQISSEQQTSNGNLTQNNFAI NRNAQAISIQLVSERIQGNKIYVSLRLDLNDDPTQQCPNGQLKAAILIPQAQIKDRTQLRYGQLSGFEEVISEKLGSVIE DYSSTGFSHTHAKELLDIKQDLVDIRGYRLPSWLSEITDSQYILQPQIMDISMEPVQATFLGFWDEAPLRQFQFKLSLYH GISGEEVWSKSYSTSAPWEFEEQAIIAPNTDRFWRSSYGKNITKLMQQATHDLDSTLNCRPLLGQVVSRQADRIILNLGR KHGIRVGDKFQVVLQQNLPDRLNEMRAVATKSRATVKIEQVSEESSTAVLLDQNAAYNVQINDIALKI
Sequences:
>Translated_388_residues MHIPRSASLIILSLALLSLPIRAEWMEASGEATIINGNTAQAREEAINQAVSYATLSTGIQISSEQQTSNGNLTQNNFAI NRNAQAISIQLVSERIQGNKIYVSLRLDLNDDPTQQCPNGQLKAAILIPQAQIKDRTQLRYGQLSGFEEVISEKLGSVIE DYSSTGFSHTHAKELLDIKQDLVDIRGYRLPSWLSEITDSQYILQPQIMDISMEPVQATFLGFWDEAPLRQFQFKLSLYH GISGEEVWSKSYSTSAPWEFEEQAIIAPNTDRFWRSSYGKNITKLMQQATHDLDSTLNCRPLLGQVVSRQADRIILNLGR KHGIRVGDKFQVVLQQNLPDRLNEMRAVATKSRATVKIEQVSEESSTAVLLDQNAAYNVQINDIALKI >Mature_388_residues MHIPRSASLIILSLALLSLPIRAEWMEASGEATIINGNTAQAREEAINQAVSYATLSTGIQISSEQQTSNGNLTQNNFAI NRNAQAISIQLVSERIQGNKIYVSLRLDLNDDPTQQCPNGQLKAAILIPQAQIKDRTQLRYGQLSGFEEVISEKLGSVIE DYSSTGFSHTHAKELLDIKQDLVDIRGYRLPSWLSEITDSQYILQPQIMDISMEPVQATFLGFWDEAPLRQFQFKLSLYH GISGEEVWSKSYSTSAPWEFEEQAIIAPNTDRFWRSSYGKNITKLMQQATHDLDSTLNCRPLLGQVVSRQADRIILNLGR KHGIRVGDKFQVVLQQNLPDRLNEMRAVATKSRATVKIEQVSEESSTAVLLDQNAAYNVQINDIALKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43475; Mature: 43475
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIPRSASLIILSLALLSLPIRAEWMEASGEATIINGNTAQAREEAINQAVSYATLSTGI CCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCE QISSEQQTSNGNLTQNNFAINRNAQAISIQLVSERIQGNKIYVSLRLDLNDDPTQQCPNG EEECCCCCCCCCEECCCEEEECCCCEEEEEEEHHHHCCCEEEEEEEEECCCCCHHHCCCC QLKAAILIPQAQIKDRTQLRYGQLSGFEEVISEKLGSVIEDYSSTGFSHTHAKELLDIKQ CEEEEEEECCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH DLVDIRGYRLPSWLSEITDSQYILQPQIMDISMEPVQATFLGFWDEAPLRQFQFKLSLYH HHHHHCCCCCHHHHHHHCCCCEEECCEEEECCCCCHHHHHHCCCCCCHHHHHHEEEHEEC GISGEEVWSKSYSTSAPWEFEEQAIIAPNTDRFWRSSYGKNITKLMQQATHDLDSTLNCR CCCCHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCH PLLGQVVSRQADRIILNLGRKHGIRVGDKFQVVLQQNLPDRLNEMRAVATKSRATVKIEQ HHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEHEEHHCCHHHHHHHHHHHHCCCCEEEEEE VSEESSTAVLLDQNAAYNVQINDIALKI CCCCCCEEEEEECCCEEEEEEEEEEEEC >Mature Secondary Structure MHIPRSASLIILSLALLSLPIRAEWMEASGEATIINGNTAQAREEAINQAVSYATLSTGI CCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCE QISSEQQTSNGNLTQNNFAINRNAQAISIQLVSERIQGNKIYVSLRLDLNDDPTQQCPNG EEECCCCCCCCCEECCCEEEECCCCEEEEEEEHHHHCCCEEEEEEEEECCCCCHHHCCCC QLKAAILIPQAQIKDRTQLRYGQLSGFEEVISEKLGSVIEDYSSTGFSHTHAKELLDIKQ CEEEEEEECCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH DLVDIRGYRLPSWLSEITDSQYILQPQIMDISMEPVQATFLGFWDEAPLRQFQFKLSLYH HHHHHCCCCCHHHHHHHCCCCEEECCEEEECCCCCHHHHHHCCCCCCHHHHHHEEEHEEC GISGEEVWSKSYSTSAPWEFEEQAIIAPNTDRFWRSSYGKNITKLMQQATHDLDSTLNCR CCCCHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCH PLLGQVVSRQADRIILNLGRKHGIRVGDKFQVVLQQNLPDRLNEMRAVATKSRATVKIEQ HHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEHEEHHCCHHHHHHHHHHHHCCCCEEEEEE VSEESSTAVLLDQNAAYNVQINDIALKI CCCCCCEEEEEECCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA