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The map label for this gene is fliM [H]

Identifier: 126175121

GI number: 126175121

Start: 3432401

End: 3433429

Strand: Reverse

Name: fliM [H]

Synonym: Sbal_2919

Alternate gene names: 126175121

Gene position: 3433429-3432401 (Counterclockwise)

Preceding gene: 126175122

Following gene: 126175120

Centisome position: 66.96

GC content: 43.83

Gene sequence:

>1029_bases
GTGAGTGATTTATTAAGCCAAGACGAAATTGATGCGCTACTGCACGGGGTTGATGACGTCGATGATGATGAAATTGACGC
TGTCGGAGAAGATGCTCGCTCTTACGACTTCTCTTCCCAAGATCGAATAGTTCGTGGGCGTATGCCGACGTTGGAAATCG
TGAATGAGCGTTTTGCACGCCATTTGCGTATCAGCATGTTCAATATGATGCGCCGTGCTGCCGAAGTGTCGATTAACGGT
GTACAGATGCTCAAGTTTGGCGAGTATGTACATACGCTATTCGTTCCTACTAGCTTGAATATGGTGCGTTTTAGTCCGCT
CAAAGGTACTGCATTGATCACCATGGAAGCTCGATTGGTGTTCATCCTAGTGGATAACTTCTTTGGTGGTGATGGGCGTT
TCCATGCCAAGATTGAAGGGCGTGAATTTACGCCAACAGAAAGACGTATTGTACAACTGTTGCTCAAAATAATTTTTGAA
GATTATAAAGATGCTTGGGCACCTGTAATGGATGTGGAGTTTGATTATTTGGACTCTGAAGTCAATCCGGCCATGGCCAA
CATTGTCAGCCCTACCGAAGTTGTCGTGATTAACTCATTCCATATTGAAGTCGATGGCGGTGGCGGTGATTTCCATATCA
CTATGCCTTATTCCATGATTGAGCCTATTCGCGAGTTGCTCGATGCCGGTGTACAAAGTGATAAGCAAGATACTGACATG
CGTTGGTCTCAGGCATTGCATGATGAAATCATGGATGTGAAGGTTGGGTTCGATGCCAATATTGTGGAACATGAGTTAAC
GCTCAAAGATGTGATGAATTTTAAAGCGGGCGATATTATTCCGATTGAGCTGCCGGAATATATTATGATGAAAATCGAGG
ATTTACCGACATATCGTTGTAAAATGGGCCGTTCTAGAGATAACCTAGCGCTTAAAATATATGAAAAGATCCCTCGGCCA
GAGACAGTTAAATCCGAGCTACAATTAGTGACGCGCAAGGGTAAATCTCGCGATATATCAGAATTATAA

Upstream 100 bases:

>100_bases
GTCGGTTACTGGCCGTAAAGTTGTCGAGAAAGTGCTGTTTACTGGTTTTGTGATGCAATAACCCTTTAATTTCAGCACCA
AAAGAGGCGAAGGCAATATA

Downstream 100 bases:

>100_bases
GGTGAAGTAAGATGAGCACAGACGATACGGATGATTGGGCTGCAGCAATGGCAGAACAAGCCTTAGAGGAAGCTAACGCG
ATTGAACTCGATGAATTAGT

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSDLLSQDEIDALLHGVDDVDDDEIDAVGEDARSYDFSSQDRIVRGRMPTLEIVNERFARHLRISMFNMMRRAAEVSING
VQMLKFGEYVHTLFVPTSLNMVRFSPLKGTALITMEARLVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFE
DYKDAWAPVMDVEFDYLDSEVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDM
RWSQALHDEIMDVKVGFDANIVEHELTLKDVMNFKAGDIIPIELPEYIMMKIEDLPTYRCKMGRSRDNLALKIYEKIPRP
ETVKSELQLVTRKGKSRDISEL

Sequences:

>Translated_342_residues
MSDLLSQDEIDALLHGVDDVDDDEIDAVGEDARSYDFSSQDRIVRGRMPTLEIVNERFARHLRISMFNMMRRAAEVSING
VQMLKFGEYVHTLFVPTSLNMVRFSPLKGTALITMEARLVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFE
DYKDAWAPVMDVEFDYLDSEVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDM
RWSQALHDEIMDVKVGFDANIVEHELTLKDVMNFKAGDIIPIELPEYIMMKIEDLPTYRCKMGRSRDNLALKIYEKIPRP
ETVKSELQLVTRKGKSRDISEL
>Mature_341_residues
SDLLSQDEIDALLHGVDDVDDDEIDAVGEDARSYDFSSQDRIVRGRMPTLEIVNERFARHLRISMFNMMRRAAEVSINGV
QMLKFGEYVHTLFVPTSLNMVRFSPLKGTALITMEARLVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFED
YKDAWAPVMDVEFDYLDSEVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDMR
WSQALHDEIMDVKVGFDANIVEHELTLKDVMNFKAGDIIPIELPEYIMMKIEDLPTYRCKMGRSRDNLALKIYEKIPRPE
TVKSELQLVTRKGKSRDISEL

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=313, Percent_Identity=40.5750798722045, Blast_Score=261, Evalue=4e-71,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 39115; Mature: 38984

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS00387 PPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLLSQDEIDALLHGVDDVDDDEIDAVGEDARSYDFSSQDRIVRGRMPTLEIVNERFAR
CCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCHHCCCCCCCCCEEECCCCHHHHHHHHHHH
HLRISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFSPLKGTALITMEARLV
HHHHHHHHHHHHHHHCCCCCEEHHHHHHHEEEEEECCCCCEEEECCCCCEEEEEEECEEE
FILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYLDSE
EEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCC
VNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDM
CCHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCHHH
RWSQALHDEIMDVKVGFDANIVEHELTLKDVMNFKAGDIIPIELPEYIMMKIEDLPTYRC
HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCHHH
KMGRSRDNLALKIYEKIPRPETVKSELQLVTRKGKSRDISEL
HCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SDLLSQDEIDALLHGVDDVDDDEIDAVGEDARSYDFSSQDRIVRGRMPTLEIVNERFAR
CCCCCHHHHHHHHHCCCCCCCCHHHHCCCCHHCCCCCCCCCEEECCCCHHHHHHHHHHH
HLRISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFSPLKGTALITMEARLV
HHHHHHHHHHHHHHHCCCCCEEHHHHHHHEEEEEECCCCCEEEECCCCCEEEEEEECEEE
FILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYLDSE
EEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCC
VNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDM
CCHHHHHHCCCCEEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCHHH
RWSQALHDEIMDVKVGFDANIVEHELTLKDVMNFKAGDIIPIELPEYIMMKIEDLPTYRC
HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCHHH
KMGRSRDNLALKIYEKIPRPETVKSELQLVTRKGKSRDISEL
HCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]