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The map label for this gene is fliN [H]

Identifier: 126175120

GI number: 126175120

Start: 3432009

End: 3432389

Strand: Reverse

Name: fliN [H]

Synonym: Sbal_2918

Alternate gene names: 126175120

Gene position: 3432389-3432009 (Counterclockwise)

Preceding gene: 126175121

Following gene: 126175119

Centisome position: 66.94

GC content: 42.78

Gene sequence:

>381_bases
ATGAGCACAGACGATACGGATGATTGGGCTGCAGCAATGGCAGAACAAGCCTTAGAGGAAGCTAACGCGATTGAACTCGA
TGAATTAGTTGATGATTCAAGACCTATCACTAAGGCAGAAGCGGCAAAATTAGATACTATTTTAGATATCCCCGTCACTA
TCTCTATGGAAGTGGGCCGTAGCTACATTAGTATTCGTAACCTGTTGCAGTTAAACCAAGGTTCTGTGGTTGAGCTAGAC
AGAGTTGCAGGTGAACCCTTAGATGTGATGGTTAACGGTACGCTGATTGCGCATGGTGAGGTTGTGGTAGTAAACGATAA
ATTCGGTATTCGTTTAACCGATGTGATCAGTCAAACCGAGCGAATTAAAAAGCTTAAATAA

Upstream 100 bases:

>100_bases
ATGAAAAGATCCCTCGGCCAGAGACAGTTAAATCCGAGCTACAATTAGTGACGCGCAAGGGTAAATCTCGCGATATATCA
GAATTATAAGGTGAAGTAAG

Downstream 100 bases:

>100_bases
TACGAGCTGTATAAGTAGTTGGAACTTTAAATGAGCACATCGGTAATACACAGTTTAGTGGCAGCGGTTCAAACGAGCGC
CGATAGCCTCGGGGAAGGCG

Product: flagellar motor switch protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSTDDTDDWAAAMAEQALEEANAIELDELVDDSRPITKAEAAKLDTILDIPVTISMEVGRSYISIRNLLQLNQGSVVELD
RVAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQTERIKKLK

Sequences:

>Translated_126_residues
MSTDDTDDWAAAMAEQALEEANAIELDELVDDSRPITKAEAAKLDTILDIPVTISMEVGRSYISIRNLLQLNQGSVVELD
RVAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQTERIKKLK
>Mature_125_residues
STDDTDDWAAAMAEQALEEANAIELDELVDDSRPITKAEAAKLDTILDIPVTISMEVGRSYISIRNLLQLNQGSVVELDR
VAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQTERIKKLK

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Potential). Bacterial flagellum basal body (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=119, Percent_Identity=44.5378151260504, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 13792; Mature: 13661

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDDTDDWAAAMAEQALEEANAIELDELVDDSRPITKAEAAKLDTILDIPVTISMEVGR
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHCCEEEECCEEEEHHHCH
SYISIRNLLQLNQGSVVELDRVAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQTE
HHHHHHHHHHCCCCCEEEEHHHCCCCEEEEEECEEEECCEEEEEECCCCEEHHHHHHHHH
RIKKLK
HHHCCC
>Mature Secondary Structure 
STDDTDDWAAAMAEQALEEANAIELDELVDDSRPITKAEAAKLDTILDIPVTISMEVGR
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHCCEEEECCEEEEHHHCH
SYISIRNLLQLNQGSVVELDRVAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVISQTE
HHHHHHHHHHCCCCCEEEEHHHCCCCEEEEEECEEEECCEEEEEECCCCEEHHHHHHHHH
RIKKLK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622217; 10984043 [H]