| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is ylxH [H]
Identifier: 126175112
GI number: 126175112
Start: 3424008
End: 3424889
Strand: Reverse
Name: ylxH [H]
Synonym: Sbal_2910
Alternate gene names: 126175112
Gene position: 3424889-3424008 (Counterclockwise)
Preceding gene: 126175113
Following gene: 126175111
Centisome position: 66.8
GC content: 45.24
Gene sequence:
>882_bases ATGACCCTGGATCAAGCAAGTGGTTTACGTATGATGAATCAACCCTATAACGAAAAAGTGAAAGTAATCGCGGTCACAGG TGGTAAAGGCGGCGTTGGTAAAACCAGCGTTTCCATTAATACAGCTGTGGCATTAGCCGAAAAAGGCAAGCGTGTCTTGG TACTTGATGCTGACCTTGGCTTAGCAAACGTCGATGTCATGCTGGGTATTCGTGCCGAGCGTAACCTCTCCCATGTTCTC TCTGGTGATGCAGAGCTTGACGATATTATCGTTCGTGGCCCTAAAGGGATTGGCATAGTGCCAGCCACTTCAGGAACACA AGGGATGGTGGAATTAAGCCCAGCGCAACATGCAGGGTTAATTCGCGCATTTAGTGAGATGCGGACTCAGTTTGATATTC TAGTCGTAGATACTGCTGCTGGGATTTCAGATATGGTGCTCAGTTTCTCACGTGCATCGCAGGATGTGCTGGTCGTTGTT TGTGATGAACCCACATCAATTACCGATGCCTATGCCCTGATAAAAATCCTCAGCCGTGAGCATGGCGTGTTCCGTTTTAA AATAGTTGCCAATATGGTGCGTAGTTTACGCGAAGGTATGGAATTATTTGCTAAACTCAGTAAAGTGACCGACAGATTTT TGGATGTCGCCCTTGAATTGGTTGCAACAATCCCATTTGACGAAAACTTACGTAAATCAGTTCGTAAACAAAAATTGGTG GTTGAAGCTTATCCTAAATCACCAGCAGCGATTGCGTATCAAGGGTTGGCAAATAAAATTCTAAGCTGGCCTGTACCGCA GCAACCTGGTGGGCATTTGGAGTTTTTCGTTGAGCGTTTAGTACAACGACCAGATTTTCAAGAGGAAAAAACGAGTGAAT AA
Upstream 100 bases:
>100_bases TTAGCCCAGCAGGCACTCGCAGCGTTAGATAGTACAGAACAACAATCATTACAAGACACAGCGTGGTCAGATAATATGGC CTGTGCATTTGAGTAGATTT
Downstream 100 bases:
>100_bases AGCCGCTGCGTATACTTGTTTAGACAATAAATCGTCGATCGTTGAACAGTATGCTCCGTTGGTTAAAAGAATTGCGCATC ATTTACTCGCCAGACTACCT
Product: cobyrinic acid ac-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGIRAERNLSHVL SGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGLIRAFSEMRTQFDILVVDTAAGISDMVLSFSRASQDVLVVV CDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV VEAYPKSPAAIAYQGLANKILSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE
Sequences:
>Translated_293_residues MTLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGIRAERNLSHVL SGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGLIRAFSEMRTQFDILVVDTAAGISDMVLSFSRASQDVLVVV CDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV VEAYPKSPAAIAYQGLANKILSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE >Mature_292_residues TLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGIRAERNLSHVLS GDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGLIRAFSEMRTQFDILVVDTAAGISDMVLSFSRASQDVLVVVC DEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLVV EAYPKSPAAIAYQGLANKILSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787423, Length=163, Percent_Identity=31.2883435582822, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI87082045, Length=273, Percent_Identity=26.3736263736264, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 31859; Mature: 31728
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLG CCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCC LANVDVMLGIRAERNLSHVLSGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGL EECEEEEEEECCCCCHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCEEEECCHHHHHH IRAFSEMRTQFDILVVDTAAGISDMVLSFSRASQDVLVVVCDEPTSITDAYALIKILSRE HHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCC HGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEE VEAYPKSPAAIAYQGLANKILSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE EEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLG CCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCC LANVDVMLGIRAERNLSHVLSGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGL EECEEEEEEECCCCCHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCEEEECCHHHHHH IRAFSEMRTQFDILVVDTAAGISDMVLSFSRASQDVLVVVCDEPTSITDAYALIKILSRE HHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCC HGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEE VEAYPKSPAAIAYQGLANKILSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE EEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]