| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is cheB1 [H]
Identifier: 126175107
GI number: 126175107
Start: 3418713
End: 3419840
Strand: Reverse
Name: cheB1 [H]
Synonym: Sbal_2905
Alternate gene names: 126175107
Gene position: 3419840-3418713 (Counterclockwise)
Preceding gene: 126175108
Following gene: 126175106
Centisome position: 66.7
GC content: 46.72
Gene sequence:
>1128_bases ATGGCCATTAAAGTATTAGTCGTTGATGACTCAAGTTTTTTCAGACGACGTGTTAGTGAAATAGTCAATCAAGATCCTGA ACTGGAAGTTATCGCGACGGCCTCAAATGGGGCCGAAGCGGTGAAGATGGCTGCTGAGCTTAATCCTCAAGTTATCACTA TGGATATTGAGATGCCCGTGATGGATGGCATTACTGCCGTCCGTGAAATCATGGCTAAATGTCCGACTCCGATCTTGATG TTTTCTTCTTTAACCCATGATGGCGCTAAAGCAACGTTAGACGCTTTAGATGCTGGTGCGTTAGATTTTCTACCTAAACG TTTTGAAGACATTGCTACCAATAAAGATGATGCTATTTTATTGTTACAGCAGAGAGTTAAGGCATTGGGACGCCGCAGAA TGTTTCGTCCTATTGCACGTCCTGTCGTAGCTTCAACACCTAGCATGCGTCCAACAAGTAGCGTTTTAGGGACAACGAGT ATAGCGTCGCATACTCCAGCCACTGCTTCTGTGAGGACCTCAACTGCAGCGTCGATTCGTGCAAGTGGTAAGCAGTATAA GTTACTGCTGATCGGCACATCTACTGGTGGTCCAGTTGCCTTGCAAAAAATTCTTACCCAATTCCCGGCAAACTATCCGC ATCCGATTTTATTAATTCAGCATATGCCCGCAGCTTTTACGCCAGCATTTGCAAGTCGCTTGAATGGCTTATGTAAAATT GAAGTAAAAGAGGCTGCTAATGGCGATCTTCTTAAACCGGGTTGTGCGTATTTAGCGCCTGGCGGTATGCAAATGATGGT TGAACGCACTGGAGGCAGTGGTCGATTAAAGGTCATCGCTGGTAGTGCGGACATGAACTATAAGCCTTGTGTTGATATCA CCTTTGCTTCTGCCTCTAAAGCCTTTAGCGGTGACGTACTTGCCGTTGTGTTAACCGGTATGGGCGCGGATGGCAGAGAA GGTGCCCGCATGTTGAAAGCGGTCGGTGCGACCATTTGGGCACAGGATGAAGCCAGTTGTGTGGTTTATGGTATGCCACA GGCTGTTGCCAGCGCGGGTATTGCAACTCAGTCCATTGCCTTAGACAACATGGCTGAATGCATTTTAAAAGAGTCTGTTC GTGTCTAA
Upstream 100 bases:
>100_bases CGATTACATCGGATGGTGGTATCGCACTGATCTTAGATGTCCCTGGATTGTTAAAGCATTATGCGAAAAGTAAGAATTAG TTTCCAAGCTAAGGAATGGA
Downstream 100 bases:
>100_bases GAGCCAAAATCCGATGAGCACAAATAGTGTGCTCATCATCTTGCTGATGGCTATTGCCATTTTGTGTCTTGGCGCCTTGA GCCTCGATTATCGGCACAAA
Product: chemotaxis-specific methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MAIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPVMDGITAVREIMAKCPTPILM FSSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDDAILLLQQRVKALGRRRMFRPIARPVVASTPSMRPTSSVLGTTS IASHTPATASVRTSTAASIRASGKQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFASRLNGLCKI EVKEAANGDLLKPGCAYLAPGGMQMMVERTGGSGRLKVIAGSADMNYKPCVDITFASASKAFSGDVLAVVLTGMGADGRE GARMLKAVGATIWAQDEASCVVYGMPQAVASAGIATQSIALDNMAECILKESVRV
Sequences:
>Translated_375_residues MAIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPVMDGITAVREIMAKCPTPILM FSSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDDAILLLQQRVKALGRRRMFRPIARPVVASTPSMRPTSSVLGTTS IASHTPATASVRTSTAASIRASGKQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFASRLNGLCKI EVKEAANGDLLKPGCAYLAPGGMQMMVERTGGSGRLKVIAGSADMNYKPCVDITFASASKAFSGDVLAVVLTGMGADGRE GARMLKAVGATIWAQDEASCVVYGMPQAVASAGIATQSIALDNMAECILKESVRV >Mature_374_residues AIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPVMDGITAVREIMAKCPTPILMF SSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDDAILLLQQRVKALGRRRMFRPIARPVVASTPSMRPTSSVLGTTSI ASHTPATASVRTSTAASIRASGKQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFASRLNGLCKIE VKEAANGDLLKPGCAYLAPGGMQMMVERTGGSGRLKVIAGSADMNYKPCVDITFASASKAFSGDVLAVVLTGMGADGREG ARMLKAVGATIWAQDEASCVVYGMPQAVASAGIATQSIALDNMAECILKESVRV
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=372, Percent_Identity=35.752688172043, Blast_Score=224, Evalue=7e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 39624; Mature: 39492
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPV CEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCH MDGITAVREIMAKCPTPILMFSSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDDAIL HHHHHHHHHHHHHCCCCEEEHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEH LLQQRVKALGRRRMFRPIARPVVASTPSMRPTSSVLGTTSIASHTPATASVRTSTAASIR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHCCCCCCCCEEECCHHHHHH ASGKQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFASRLNGLCKI CCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEE EVKEAANGDLLKPGCAYLAPGGMQMMVERTGGSGRLKVIAGSADMNYKPCVDITFASASK EEECCCCCCCCCCCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCC AFSGDVLAVVLTGMGADGREGARMLKAVGATIWAQDEASCVVYGMPQAVASAGIATQSIA CCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCEEEEECHHHHHHCCCCHHHHH LDNMAECILKESVRV HHHHHHHHHHHHCCC >Mature Secondary Structure AIKVLVVDDSSFFRRRVSEIVNQDPELEVIATASNGAEAVKMAAELNPQVITMDIEMPV EEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCH MDGITAVREIMAKCPTPILMFSSLTHDGAKATLDALDAGALDFLPKRFEDIATNKDDAIL HHHHHHHHHHHHHCCCCEEEHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEH LLQQRVKALGRRRMFRPIARPVVASTPSMRPTSSVLGTTSIASHTPATASVRTSTAASIR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHCCCCCCCCEEECCHHHHHH ASGKQYKLLLIGTSTGGPVALQKILTQFPANYPHPILLIQHMPAAFTPAFASRLNGLCKI CCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEE EVKEAANGDLLKPGCAYLAPGGMQMMVERTGGSGRLKVIAGSADMNYKPCVDITFASASK EEECCCCCCCCCCCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCC AFSGDVLAVVLTGMGADGREGARMLKAVGATIWAQDEASCVVYGMPQAVASAGIATQSIA CCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCEEEEECHHHHHHCCCCHHHHH LDNMAECILKESVRV HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]