BacMap

Definition	Shewanella baltica OS155 chromosome, complete genome.
Accession	NC_009052
Length	5,127,376

Click here to switch to the map view.

The map label for this gene is fabG [C]

Identifier: 126175024

GI number: 126175024

Start: 3317888

End: 3318826

Strand: Reverse

Name: fabG [C]

Synonym: Sbal_2819

Alternate gene names: 126175024

Gene position: 3318826-3317888 (Counterclockwise)

Preceding gene: 126175026

Following gene: 126175023

Centisome position: 64.73

GC content: 48.67

Gene sequence:

>939_bases
ATGCGTTTCGATAATAAGGTGGCGTTAGTCACTGGGGCGGGAGCAGGGCTAGGTCGAGCCTATGCCATTATGTTAGCTGA
GCGGGGCGCGAAAGTGGTGCTCGTTGATCAGCCGTTATCGTCATCCGAGTCTATTTCTACCGATAGCGCTCAAACAATGC
CGGCCAACTTAGCATTGATGCAAACCTACTGCAGCATTATTAAACTCGGCGGTGACTGTCTCTACTTTGTGCTTGATGTT
AGCCAGCGGGATGAAGTAAACCGCATGGTCGAAGAGGTGATCCTACGTTGGCATCGCATTGATATCTTGATTAATAACGC
GGGGGTCTACGGTGCTTGTCCGTTCGAGCACATTAAGCTTGAGCAGTGGCAACGGCAATTGGATGTCGATCTCAATGGCA
GTTTTTATCTGACGCAAGCCGTTTGGCCCTATATGCAACAACAGGATTATGGTCGGATCATGATGACGACGGGAGCTTCG
GCCTTATTTGGTGATTTGCATCAAGTCGGTTTCAGCGCGAGTAAAATGGCGCTGGTGGGCATGGTGAATTGCTTATCGAT
AGAAGGAGAAATTCATAATATTCGCGTCAATAGTTTATGCCCACAGGCCGTCACAGCGATGACAGCCAAACATTTAGCAA
GTGCGATTCAGCCGTTATTTTCCTTTGAGTCATTAACCGCCACGACGGCCTTTTTGGTGAGTGAACAAGCGCCCAATGGT
CAACACTTACTCGCAGGTGCGGGCAGCGTCAGTCATGGCATGTTTGTCGAGTTTCAGCCGATGTATTTTAATGAGGGGCT
TTTTACGCCTGATAATCTCGCGCAGCAGTGGCCCCTGCTATACCAATCCTTTCCTGTGACTTTGCACTCCAGTGGTGAGG
ATAAAGTCTTGTCTTGGTCTCAGTTAAGCGCGCTAGAACACCATATTAAAATTGATTGA

Upstream 100 bases:

>100_bases
CTGGAGATACCACAGGTGCTAGTCGCCTTATGCGGGTTGTTTTTGAGCATTCATTGGCTGCGTTTTGCCGCTACTGTTAT
GCCGATAAGGATATATTTGG

Downstream 100 bases:

>100_bases
TGAGTGACACTGTTACCCATAACTCAGCCCATGACCTCTGTTATTAAACCGCGTTAACGGGTCAAGTAAAACCCTTCGCA
ATACGCAGATGACATCCGCA

Product: short-chain dehydrogenase/reductase SDR

Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRFDNKVALVTGAGAGLGRAYAIMLAERGAKVVLVDQPLSSSESISTDSAQTMPANLALMQTYCSIIKLGGDCLYFVLDV
SQRDEVNRMVEEVILRWHRIDILINNAGVYGACPFEHIKLEQWQRQLDVDLNGSFYLTQAVWPYMQQQDYGRIMMTTGAS
ALFGDLHQVGFSASKMALVGMVNCLSIEGEIHNIRVNSLCPQAVTAMTAKHLASAIQPLFSFESLTATTAFLVSEQAPNG
QHLLAGAGSVSHGMFVEFQPMYFNEGLFTPDNLAQQWPLLYQSFPVTLHSSGEDKVLSWSQLSALEHHIKID

Sequences:

>Translated_312_residues
MRFDNKVALVTGAGAGLGRAYAIMLAERGAKVVLVDQPLSSSESISTDSAQTMPANLALMQTYCSIIKLGGDCLYFVLDV
SQRDEVNRMVEEVILRWHRIDILINNAGVYGACPFEHIKLEQWQRQLDVDLNGSFYLTQAVWPYMQQQDYGRIMMTTGAS
ALFGDLHQVGFSASKMALVGMVNCLSIEGEIHNIRVNSLCPQAVTAMTAKHLASAIQPLFSFESLTATTAFLVSEQAPNG
QHLLAGAGSVSHGMFVEFQPMYFNEGLFTPDNLAQQWPLLYQSFPVTLHSSGEDKVLSWSQLSALEHHIKID
>Mature_312_residues
MRFDNKVALVTGAGAGLGRAYAIMLAERGAKVVLVDQPLSSSESISTDSAQTMPANLALMQTYCSIIKLGGDCLYFVLDV
SQRDEVNRMVEEVILRWHRIDILINNAGVYGACPFEHIKLEQWQRQLDVDLNGSFYLTQAVWPYMQQQDYGRIMMTTGAS
ALFGDLHQVGFSASKMALVGMVNCLSIEGEIHNIRVNSLCPQAVTAMTAKHLASAIQPLFSFESLTATTAFLVSEQAPNG
QHLLAGAGSVSHGMFVEFQPMYFNEGLFTPDNLAQQWPLLYQSFPVTLHSSGEDKVLSWSQLSALEHHIKID

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4504505, Length=224, Percent_Identity=38.3928571428571, Blast_Score=154, Evalue=9e-38,
Organism=Homo sapiens, GI4758504, Length=207, Percent_Identity=29.951690821256, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI40254992, Length=240, Percent_Identity=30, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI32483357, Length=266, Percent_Identity=27.0676691729323, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI83715985, Length=187, Percent_Identity=31.0160427807487, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI19923817, Length=261, Percent_Identity=26.8199233716475, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI157739938, Length=203, Percent_Identity=28.0788177339901, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI31542939, Length=207, Percent_Identity=28.9855072463768, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI210032110, Length=223, Percent_Identity=24.6636771300448, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI10190704, Length=202, Percent_Identity=26.2376237623762, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI142976729, Length=223, Percent_Identity=25.1121076233184, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI126723191, Length=201, Percent_Identity=29.8507462686567, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI25282469, Length=229, Percent_Identity=27.5109170305677, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI15277342, Length=252, Percent_Identity=25, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI40807363, Length=200, Percent_Identity=25.5, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI4503817, Length=198, Percent_Identity=24.7474747474747, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI59889578, Length=174, Percent_Identity=24.7126436781609, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI4557649, Length=211, Percent_Identity=25.5924170616114, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI224922801, Length=184, Percent_Identity=29.8913043478261, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1787335, Length=201, Percent_Identity=29.3532338308458, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1787905, Length=218, Percent_Identity=29.8165137614679, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87082100, Length=218, Percent_Identity=29.8165137614679, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788459, Length=267, Percent_Identity=25.0936329588015, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787526, Length=211, Percent_Identity=26.5402843601896, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789208, Length=202, Percent_Identity=23.7623762376238, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI87082160, Length=196, Percent_Identity=26.0204081632653, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790717, Length=196, Percent_Identity=25, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1787820, Length=150, Percent_Identity=30, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI2367175, Length=200, Percent_Identity=27.5, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17568967, Length=293, Percent_Identity=31.3993174061433, Blast_Score=141, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17564282, Length=201, Percent_Identity=26.865671641791, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17538182, Length=207, Percent_Identity=27.0531400966184, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17561402, Length=206, Percent_Identity=27.6699029126214, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI71982365, Length=207, Percent_Identity=28.0193236714976, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=202, Percent_Identity=25.2475247524752, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=248, Percent_Identity=25.4032258064516, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=198, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI193203117, Length=203, Percent_Identity=24.6305418719212, Blast_Score=71, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=198, Percent_Identity=25.2525252525253, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=211, Percent_Identity=27.0142180094787, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71997402, Length=187, Percent_Identity=26.2032085561497, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=201, Percent_Identity=24.8756218905473, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=206, Percent_Identity=26.6990291262136, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=215, Percent_Identity=27.906976744186, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=198, Percent_Identity=25.2525252525253, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71994600, Length=215, Percent_Identity=26.5116279069767, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17570069, Length=187, Percent_Identity=25.1336898395722, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17544670, Length=215, Percent_Identity=27.4418604651163, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=275, Percent_Identity=32, Blast_Score=143, Evalue=4e-35,
Organism=Drosophila melanogaster, GI18859837, Length=249, Percent_Identity=37.3493975903614, Blast_Score=159, Evalue=2e-39,
Organism=Drosophila melanogaster, GI23397609, Length=201, Percent_Identity=27.363184079602, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI17737361, Length=211, Percent_Identity=27.0142180094787, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI281364892, Length=211, Percent_Identity=28.436018957346, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24644339, Length=201, Percent_Identity=24.3781094527363, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21357041, Length=203, Percent_Identity=25.615763546798, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24643142, Length=262, Percent_Identity=29.7709923664122, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21355319, Length=265, Percent_Identity=27.5471698113208, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571526, Length=203, Percent_Identity=26.6009852216749, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24640492, Length=227, Percent_Identity=22.9074889867841, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24639444, Length=245, Percent_Identity=28.1632653061224, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21358495, Length=207, Percent_Identity=26.0869565217391, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI221510726, Length=203, Percent_Identity=29.064039408867, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580925, Length=198, Percent_Identity=26.7676767676768, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.1.1.100 [C]

Molecular weight: Translated: 34382; Mature: 34382

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDNKVALVTGAGAGLGRAYAIMLAERGAKVVLVDQPLSSSESISTDSAQTMPANLALM
CCCCCEEEEEEECCCCCCHHEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHH
QTYCSIIKLGGDCLYFVLDVSQRDEVNRMVEEVILRWHRIDILINNAGVYGACPFEHIKL
HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEEEEECCCEEECCCHHHHHH
EQWQRQLDVDLNGSFYLTQAVWPYMQQQDYGRIMMTTGASALFGDLHQVGFSASKMALVG
HHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHH
MVNCLSIEGEIHNIRVNSLCPQAVTAMTAKHLASAIQPLFSFESLTATTAFLVSEQAPNG
HHEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
QHLLAGAGSVSHGMFVEFQPMYFNEGLFTPDNLAQQWPLLYQSFPVTLHSSGEDKVLSWS
CEEEEECCCCCCCEEEEEECEEECCCCCCHHHHHHHCCHHHHCCCEEEECCCCCCEECHH
QLSALEHHIKID
HHHHHHHHCCCC
>Mature Secondary Structure
MRFDNKVALVTGAGAGLGRAYAIMLAERGAKVVLVDQPLSSSESISTDSAQTMPANLALM
CCCCCEEEEEEECCCCCCHHEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHH
QTYCSIIKLGGDCLYFVLDVSQRDEVNRMVEEVILRWHRIDILINNAGVYGACPFEHIKL
HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEEEEECCCEEECCCHHHHHH
EQWQRQLDVDLNGSFYLTQAVWPYMQQQDYGRIMMTTGASALFGDLHQVGFSASKMALVG
HHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHH
MVNCLSIEGEIHNIRVNSLCPQAVTAMTAKHLASAIQPLFSFESLTATTAFLVSEQAPNG
HHEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
QHLLAGAGSVSHGMFVEFQPMYFNEGLFTPDNLAQQWPLLYQSFPVTLHSSGEDKVLSWS
CEEEEECCCCCCCEEEEEECEEECCCCCCHHHHHHHCCHHHHCCCEEEECCCCCCEECHH
QLSALEHHIKID
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NADPH [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]

Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]