| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is tesB [H]
Identifier: 126175023
GI number: 126175023
Start: 3316781
End: 3317647
Strand: Reverse
Name: tesB [H]
Synonym: Sbal_2818
Alternate gene names: 126175023
Gene position: 3317647-3316781 (Counterclockwise)
Preceding gene: 126175024
Following gene: 126175022
Centisome position: 64.7
GC content: 49.25
Gene sequence:
>867_bases ATGAGTCAGGTATTAGACGATCTTTTATCATTACTTTCCCTTGAGCAAATTGAAATCGGCCTCTTTCGTGGTCAGAGCCA AGATCTGGGATTTGGGCATGTGTTTGGTGGTCAAGTGATGGGGCAAGCGCTGAGCGCCGCTAAACAAACCGTCCCCGTTG AGCGTAAGGTCCACTCATTACACTCCTACTTTTTACGTGCTGGTGACGAGAAGTTACCGATTGTGTATGAAGTCGAAAAT ATGCGGGATGGCGGCAGTTTTAGTGCCCGCCGCGTCAGTGCAATTCAAAAAGGTCGACCGATTTTCCACATGACCTGTTC CTTCCAAGAACCTGAAGAAGGATTTAGTCATCAAGCGATGATGCCGCAAGTACCAGGACCAGAAGGTTTATTGAATCAGC AGGAATTAGCGCTGACGATGCGGGATAAAGTGCCGCCGAGTATACTCGAAAAGTTTATGGCCGATGCGCCCATTGAGATG CGACTGGTTAATCCATTACATCCCTTTGCGCCCAAAGAAACCGAGCCGTACCGTCATGTGTGGATGAGGGCCAATGGGCC CATGCCAAATGACGCCCATATTCATGAATATCTACTCGCCTATGCCTCGGACTTTAACTTTTTGGTGACAGCGGCTCAGC CCCACGGCGTGTCGTTTTTAAGTCCTGGAGTGCGCATGGCGACGATAGATCATGCGATGTGGTTCCATCGCCCGATTAAT ATGGGAGAGTGGTTGCTTTACAGTATTGATAGCCCCAATGCCAGCGGTGGCAGAGGTTACGTCAGAGGGCAGTTTTTCAA TCAACAAGGTGAATTAGTGGCTTCTTCTACCCAAGAAGGCCTGATCCGCATGGTAAAAGGACGTTAA
Upstream 100 bases:
>100_bases GAGTGATGATTTCATTGTGAATAATCGATAGAAGACTGGTCAGCTTAAGGCGAACTGAGTTACCCTTTAGCATTAATGGC TAATTATGCAGTAGGATCCC
Downstream 100 bases:
>100_bases TATGTATCTGAAAATAAAGTCGTTTGTATTGTTCTCGCTCATGGCAATTCTACTTAATGGCTGCGTGACGGTGAAACCTG AACCCCCGATTATTATCAAT
Product: acyl-CoA thioesterase II
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSQVLDDLLSLLSLEQIEIGLFRGQSQDLGFGHVFGGQVMGQALSAAKQTVPVERKVHSLHSYFLRAGDEKLPIVYEVEN MRDGGSFSARRVSAIQKGRPIFHMTCSFQEPEEGFSHQAMMPQVPGPEGLLNQQELALTMRDKVPPSILEKFMADAPIEM RLVNPLHPFAPKETEPYRHVWMRANGPMPNDAHIHEYLLAYASDFNFLVTAAQPHGVSFLSPGVRMATIDHAMWFHRPIN MGEWLLYSIDSPNASGGRGYVRGQFFNQQGELVASSTQEGLIRMVKGR
Sequences:
>Translated_288_residues MSQVLDDLLSLLSLEQIEIGLFRGQSQDLGFGHVFGGQVMGQALSAAKQTVPVERKVHSLHSYFLRAGDEKLPIVYEVEN MRDGGSFSARRVSAIQKGRPIFHMTCSFQEPEEGFSHQAMMPQVPGPEGLLNQQELALTMRDKVPPSILEKFMADAPIEM RLVNPLHPFAPKETEPYRHVWMRANGPMPNDAHIHEYLLAYASDFNFLVTAAQPHGVSFLSPGVRMATIDHAMWFHRPIN MGEWLLYSIDSPNASGGRGYVRGQFFNQQGELVASSTQEGLIRMVKGR >Mature_287_residues SQVLDDLLSLLSLEQIEIGLFRGQSQDLGFGHVFGGQVMGQALSAAKQTVPVERKVHSLHSYFLRAGDEKLPIVYEVENM RDGGSFSARRVSAIQKGRPIFHMTCSFQEPEEGFSHQAMMPQVPGPEGLLNQQELALTMRDKVPPSILEKFMADAPIEMR LVNPLHPFAPKETEPYRHVWMRANGPMPNDAHIHEYLLAYASDFNFLVTAAQPHGVSFLSPGVRMATIDHAMWFHRPINM GEWLLYSIDSPNASGGRGYVRGQFFNQQGELVASSTQEGLIRMVKGR
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=289, Percent_Identity=41.8685121107266, Blast_Score=204, Evalue=7e-53, Organism=Escherichia coli, GI1786657, Length=283, Percent_Identity=60.0706713780919, Blast_Score=353, Evalue=6e-99, Organism=Caenorhabditis elegans, GI71988741, Length=293, Percent_Identity=33.7883959044369, Blast_Score=180, Evalue=9e-46, Organism=Caenorhabditis elegans, GI17531889, Length=272, Percent_Identity=37.1323529411765, Blast_Score=178, Evalue=2e-45, Organism=Caenorhabditis elegans, GI115532456, Length=272, Percent_Identity=37.1323529411765, Blast_Score=178, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17531885, Length=272, Percent_Identity=37.1323529411765, Blast_Score=177, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17558508, Length=306, Percent_Identity=35.2941176470588, Blast_Score=167, Evalue=7e-42, Organism=Caenorhabditis elegans, GI71982224, Length=277, Percent_Identity=29.2418772563177, Blast_Score=128, Evalue=4e-30, Organism=Caenorhabditis elegans, GI212645202, Length=274, Percent_Identity=29.9270072992701, Blast_Score=120, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6322480, Length=328, Percent_Identity=24.6951219512195, Blast_Score=90, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 32218; Mature: 32087
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVLDDLLSLLSLEQIEIGLFRGQSQDLGFGHVFGGQVMGQALSAAKQTVPVERKVHSL CHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH HSYFLRAGDEKLPIVYEVENMRDGGSFSARRVSAIQKGRPIFHMTCSFQEPEEGFSHQAM HHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHCCCCCCC MPQVPGPEGLLNQQELALTMRDKVPPSILEKFMADAPIEMRLVNPLHPFAPKETEPYRHV CCCCCCCCCCCCCHHHEEEHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEE WMRANGPMPNDAHIHEYLLAYASDFNFLVTAAQPHGVSFLSPGVRMATIDHAMWFHRPIN EEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHCCCCC MGEWLLYSIDSPNASGGRGYVRGQFFNQQGELVASSTQEGLIRMVKGR CCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCHHHHHHHHHCCC >Mature Secondary Structure SQVLDDLLSLLSLEQIEIGLFRGQSQDLGFGHVFGGQVMGQALSAAKQTVPVERKVHSL HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH HSYFLRAGDEKLPIVYEVENMRDGGSFSARRVSAIQKGRPIFHMTCSFQEPEEGFSHQAM HHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHCCCCCCC MPQVPGPEGLLNQQELALTMRDKVPPSILEKFMADAPIEMRLVNPLHPFAPKETEPYRHV CCCCCCCCCCCCCHHHEEEHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEE WMRANGPMPNDAHIHEYLLAYASDFNFLVTAAQPHGVSFLSPGVRMATIDHAMWFHRPIN EEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHCCCCC MGEWLLYSIDSPNASGGRGYVRGQFFNQQGELVASSTQEGLIRMVKGR CCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]