| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174980
Identifier: 126174980
GI number: 126174980
Start: 3259678
End: 3260394
Strand: Direct
Name: 126174980
Synonym: Sbal_2773
Alternate gene names: NA
Gene position: 3259678-3260394 (Clockwise)
Preceding gene: 126174979
Following gene: 126174981
Centisome position: 63.57
GC content: 44.49
Gene sequence:
>717_bases ATGGAAAAAAATAACATCCTTCCTGCCCTGCTGCTGGGCGGTTTCCTTTGTGCTGGGCTTGTGTATGTTGGTCATACAGC AAGCACAGCGTTATTGCAGATGAAAGCTATGGAACGCACAGTGACAGTCAAGGGCTTAGCGGAAAAAGAAGTCAAAGCCA ATGTAGCGATTTGGCCAATCAATTTCACTGAGGTCGATAATAATCTGCCTAAACTCTACGAGACGGTTCAGCAAAAAACC GACCGCGTCGTGGCGTTTTTAAAGGAACAAGGCTTTAGCGATAGCGAAATTACGATTTCATTACCTTCAATTGAAGATCG CCAAGCCCAAGGTTATGTCGATCCCAACGTCAGATACCGTTACTCGGCAAAGGTGAACCTGTCGGTTTATACCCCGCAAA TTGATTTAATGCTCAATACTCGTAAGCAGATGATTAGCTTAGTGAAGGAAGGCATAGCGATCGCCAGCCAAGAGTACGAC AATCGCACCGAATTCCTGTTTACCGATCTCAATTCAGTCAAACCTGTGATGGTACAAGAAGCCACTCAAAATGCCCGTGA AGTGGCGGAAAAATTTGCTAAGGATTCAGATTCTCGCCTCGGAAAAATTAAAACCGCCAGTCAAGGCCAGTTTACTATTT CGGATCGCGATAACAGCACGCCTTACATTAAACAAATTCGCATTGTGTCCACACTCACCTACTATTTAAATGACTAA
Upstream 100 bases:
>100_bases CCTCAAATCTTAAGCGGCATCTATCCCGAATAAACCCAGTGCATGACTTAGGTTTATTGGGTATCGTAGGCTGAGTTTAT CTAATCAAGAGATTCTTTTT
Downstream 100 bases:
>100_bases ATTTTAGGCTTAGTCGGAACTCACTGAAACGATGGGAATAAGGCACTTATGGGCCTTATTCCTAAATTAGGAAAATACAC TATATTAAATTTTTCTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MEKNNILPALLLGGFLCAGLVYVGHTASTALLQMKAMERTVTVKGLAEKEVKANVAIWPINFTEVDNNLPKLYETVQQKT DRVVAFLKEQGFSDSEITISLPSIEDRQAQGYVDPNVRYRYSAKVNLSVYTPQIDLMLNTRKQMISLVKEGIAIASQEYD NRTEFLFTDLNSVKPVMVQEATQNAREVAEKFAKDSDSRLGKIKTASQGQFTISDRDNSTPYIKQIRIVSTLTYYLND
Sequences:
>Translated_238_residues MEKNNILPALLLGGFLCAGLVYVGHTASTALLQMKAMERTVTVKGLAEKEVKANVAIWPINFTEVDNNLPKLYETVQQKT DRVVAFLKEQGFSDSEITISLPSIEDRQAQGYVDPNVRYRYSAKVNLSVYTPQIDLMLNTRKQMISLVKEGIAIASQEYD NRTEFLFTDLNSVKPVMVQEATQNAREVAEKFAKDSDSRLGKIKTASQGQFTISDRDNSTPYIKQIRIVSTLTYYLND >Mature_238_residues MEKNNILPALLLGGFLCAGLVYVGHTASTALLQMKAMERTVTVKGLAEKEVKANVAIWPINFTEVDNNLPKLYETVQQKT DRVVAFLKEQGFSDSEITISLPSIEDRQAQGYVDPNVRYRYSAKVNLSVYTPQIDLMLNTRKQMISLVKEGIAIASQEYD NRTEFLFTDLNSVKPVMVQEATQNAREVAEKFAKDSDSRLGKIKTASQGQFTISDRDNSTPYIKQIRIVSTLTYYLND
Specific function: Unknown
COG id: COG2859
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26772; Mature: 26772
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNNILPALLLGGFLCAGLVYVGHTASTALLQMKAMERTVTVKGLAEKEVKANVAIWPI CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCHHHHHHCCEEEEEE NFTEVDNNLPKLYETVQQKTDRVVAFLKEQGFSDSEITISLPSIEDRQAQGYVDPNVRYR EHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEEE YSAKVNLSVYTPQIDLMLNTRKQMISLVKEGIAIASQEYDNRTEFLFTDLNSVKPVMVQE EEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH ATQNAREVAEKFAKDSDSRLGKIKTASQGQFTISDRDNSTPYIKQIRIVSTLTYYLND HHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHEEEEECC >Mature Secondary Structure MEKNNILPALLLGGFLCAGLVYVGHTASTALLQMKAMERTVTVKGLAEKEVKANVAIWPI CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCHHHHHHCCEEEEEE NFTEVDNNLPKLYETVQQKTDRVVAFLKEQGFSDSEITISLPSIEDRQAQGYVDPNVRYR EHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEEE YSAKVNLSVYTPQIDLMLNTRKQMISLVKEGIAIASQEYDNRTEFLFTDLNSVKPVMVQE EEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH ATQNAREVAEKFAKDSDSRLGKIKTASQGQFTISDRDNSTPYIKQIRIVSTLTYYLND HHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA