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The map label for this gene is hlyB [H]

Identifier: 126174940

GI number: 126174940

Start: 3205515

End: 3207254

Strand: Reverse

Name: hlyB [H]

Synonym: Sbal_2733

Alternate gene names: 126174940

Gene position: 3207254-3205515 (Counterclockwise)

Preceding gene: 126174941

Following gene: 126174939

Centisome position: 62.55

GC content: 46.78

Gene sequence:

>1740_bases
ATGAAAACAAAAACCATGATGAGTGTGGTATTTTCGACCATAGTCGCGAGTGCCGTGATTTCTGCGGCACTGAGCTTCAA
TGTGAAGTCTAAAATCGATCTCTTTAATGATGCCGCCAGCATCCGATATCAGTCCTATCAACTTGCCGATGAATTAAGGC
AAGGTTCCGATGACTTAACACGTCTCGCCCGTACCTACGCCGTCACTGGTGATGAAAAATACGAAAAAATGTATATGGAT
ATTTTGGCTATCCGTAATGGTGAGAAACCCAGACCCGAAAAGTACCATCAGATTTATTGGGATTTGGTACTGAGTTATGG
CGATAAGCCAAAGCCAGACGGCGCGAGAATTGCTATAAAAGAGCAAATGAAGTCCCTCGGTTTTTCCGATGAAGAATTCC
GTTACCTCGAACAAGCCCAAAAAAACTCAGATGCATTAGTCGCCCTCGAAGTGAAAGCCATGAATGCCGTCAAAGGTATC
TTTATGGACCCCAACACCCAAACCTACACGATCAAAGGCGAGCCGAACTTAACCATGGCGAGGGAGTTATTACATAGCGA
CCAATACCATAGAGAAAAAGCCAAGATCATGCAGCCGATTGATGAGTTCTTTACGGCGTTGGATAAACGTACCGATGGTG
AAGTTAATGGTCGTCTCGACTCCTTACATGCGGCATTAAACTGGTCTCAGTTCGTGTTATTTATCGTGATTTTAGCGGCC
GTTGGTGGTTTCATTATCGTTAAGAGCCGGATTGTGACTCCATTAGTGCAGACCTGTAGTGAGTTGCTCGACATTCAGCG
CTCTAAAAATCTTGCGCGGCGGATTTCTGTCACCACTCAGGGAGAGATTGGCGAAATCGTTAATCAAATCAACTTGTTTA
TCTCTTCCCTTGCCAGCTCCTTATCGAAAACGGATGGCATTGCAAAAGAGGTTGCTGATTTAGCGAAGCAAACCAAGGCA
TCCATTCAAGTTTCGCGTGAAAGCTCAAATCGGGTGGCGAGAGAACTAGATGCCAGCGCCAGTGCGATGGAAGAAATGAC
CACGACGTTAGTGCATGTGAGTGAGAGCACGTCGAACGCTGAAAGCCGCGCCGCTGAAAATGAAGCGCATGTCACTGTGG
GTAAACAGACGGTATCGGAAGCGTTGAAAGCCATGTCGGTATTGGAAACTGAGTTTACCAATACTCAAGACTCTATGTCG
CATTTAGTGAACGAAAGTACCCAAGTCAGTAATGTGTTGAGTGTGATTAAGGCGATTGCAGAGCAGACGAATTTGCTGGC
ACTGAATGCCGCGATTGAAGCCGCAAGGGCCGGTGAGCAAGGGCGAGGCTTCGCTGTGGTGGCCGATGAGGTTCGATCAT
TAGCCCAGCGAACCCAAGATTCCACTAAGGAAATCGATGATATTGTCGCAAGCCTTCAGAGTCGTACAAATCAAGTGGGT
ACATCTGTGACTCAAGCGGCGACGCTTATGCAAAAGGCGGGAGTAGAGCTGCAACGTATCGTGGCTGTATTTGAGGATAT
TCGTCACAGTACGGAAGCGATTCATGGGATCAATACTCAGGTTGCCGCTTCAACTGAGGAACAGTCCTTGGTTTCTAAAG
AAATCGCTTCGAGTATGATGGTGATCCGCGATAATTCCCGCGAAGTATCACAGATTATCGAGCAGATAGAATCGACCTCT
ATTAGCCTAGATAATCAATCCCAGATACTGCGCACTAAGGCGGGGGAATATCAGTTTTAG

Upstream 100 bases:

>100_bases
GCAAATCAAATGATTATTTCCATTGATTGTCCCACTTTTACCGATGTTTTCTGATTTTCCTTCTAGACTTAAAGCAGTTC
TTCCGTCTATTGGGGTAAGT

Downstream 100 bases:

>100_bases
ATGAGATGTGGTTGATATTTGAACGAAGGCCACTCAAGACATGGACGTCAATCCTTCCTCTTCGAATCCTCTCCTGAACA
TATTTTCTGCTTCGACACTT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MKTKTMMSVVFSTIVASAVISAALSFNVKSKIDLFNDAASIRYQSYQLADELRQGSDDLTRLARTYAVTGDEKYEKMYMD
ILAIRNGEKPRPEKYHQIYWDLVLSYGDKPKPDGARIAIKEQMKSLGFSDEEFRYLEQAQKNSDALVALEVKAMNAVKGI
FMDPNTQTYTIKGEPNLTMARELLHSDQYHREKAKIMQPIDEFFTALDKRTDGEVNGRLDSLHAALNWSQFVLFIVILAA
VGGFIIVKSRIVTPLVQTCSELLDIQRSKNLARRISVTTQGEIGEIVNQINLFISSLASSLSKTDGIAKEVADLAKQTKA
SIQVSRESSNRVARELDASASAMEEMTTTLVHVSESTSNAESRAAENEAHVTVGKQTVSEALKAMSVLETEFTNTQDSMS
HLVNESTQVSNVLSVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQDSTKEIDDIVASLQSRTNQVG
TSVTQAATLMQKAGVELQRIVAVFEDIRHSTEAIHGINTQVAASTEEQSLVSKEIASSMMVIRDNSREVSQIIEQIESTS
ISLDNQSQILRTKAGEYQF

Sequences:

>Translated_579_residues
MKTKTMMSVVFSTIVASAVISAALSFNVKSKIDLFNDAASIRYQSYQLADELRQGSDDLTRLARTYAVTGDEKYEKMYMD
ILAIRNGEKPRPEKYHQIYWDLVLSYGDKPKPDGARIAIKEQMKSLGFSDEEFRYLEQAQKNSDALVALEVKAMNAVKGI
FMDPNTQTYTIKGEPNLTMARELLHSDQYHREKAKIMQPIDEFFTALDKRTDGEVNGRLDSLHAALNWSQFVLFIVILAA
VGGFIIVKSRIVTPLVQTCSELLDIQRSKNLARRISVTTQGEIGEIVNQINLFISSLASSLSKTDGIAKEVADLAKQTKA
SIQVSRESSNRVARELDASASAMEEMTTTLVHVSESTSNAESRAAENEAHVTVGKQTVSEALKAMSVLETEFTNTQDSMS
HLVNESTQVSNVLSVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQDSTKEIDDIVASLQSRTNQVG
TSVTQAATLMQKAGVELQRIVAVFEDIRHSTEAIHGINTQVAASTEEQSLVSKEIASSMMVIRDNSREVSQIIEQIESTS
ISLDNQSQILRTKAGEYQF
>Mature_579_residues
MKTKTMMSVVFSTIVASAVISAALSFNVKSKIDLFNDAASIRYQSYQLADELRQGSDDLTRLARTYAVTGDEKYEKMYMD
ILAIRNGEKPRPEKYHQIYWDLVLSYGDKPKPDGARIAIKEQMKSLGFSDEEFRYLEQAQKNSDALVALEVKAMNAVKGI
FMDPNTQTYTIKGEPNLTMARELLHSDQYHREKAKIMQPIDEFFTALDKRTDGEVNGRLDSLHAALNWSQFVLFIVILAA
VGGFIIVKSRIVTPLVQTCSELLDIQRSKNLARRISVTTQGEIGEIVNQINLFISSLASSLSKTDGIAKEVADLAKQTKA
SIQVSRESSNRVARELDASASAMEEMTTTLVHVSESTSNAESRAAENEAHVTVGKQTVSEALKAMSVLETEFTNTQDSMS
HLVNESTQVSNVLSVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQDSTKEIDDIVASLQSRTNQVG
TSVTQAATLMQKAGVELQRIVAVFEDIRHSTEAIHGINTQVAASTEEQSLVSKEIASSMMVIRDNSREVSQIIEQIESTS
ISLDNQSQILRTKAGEYQF

Specific function: May form a pore through which the hemolysin can be exported [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=411, Percent_Identity=26.5206812652068, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI2367378, Length=370, Percent_Identity=27.5675675675676, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788195, Length=299, Percent_Identity=29.7658862876254, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1788194, Length=364, Percent_Identity=29.9450549450549, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1789453, Length=333, Percent_Identity=26.1261261261261, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR000727 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 63828; Mature: 63828

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKTMMSVVFSTIVASAVISAALSFNVKSKIDLFNDAASIRYQSYQLADELRQGSDDLT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RLARTYAVTGDEKYEKMYMDILAIRNGEKPRPEKYHQIYWDLVLSYGDKPKPDGARIAIK
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHH
EQMKSLGFSDEEFRYLEQAQKNSDALVALEVKAMNAVKGIFMDPNTQTYTIKGEPNLTMA
HHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCEECCCCEEEEEECCCCHHHH
RELLHSDQYHREKAKIMQPIDEFFTALDKRTDGEVNGRLDSLHAALNWSQFVLFIVILAA
HHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGGFIIVKSRIVTPLVQTCSELLDIQRSKNLARRISVTTQGEIGEIVNQINLFISSLASS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LSKTDGIAKEVADLAKQTKASIQVSRESSNRVARELDASASAMEEMTTTLVHVSESTSNA
HHHHCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
ESRAAENEAHVTVGKQTVSEALKAMSVLETEFTNTQDSMSHLVNESTQVSNVLSVIKAIA
HHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHH
EQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQDSTKEIDDIVASLQSRTNQVG
HHCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
TSVTQAATLMQKAGVELQRIVAVFEDIRHSTEAIHGINTQVAASTEEQSLVSKEIASSMM
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHEE
VIRDNSREVSQIIEQIESTSISLDNQSQILRTKAGEYQF
EEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MKTKTMMSVVFSTIVASAVISAALSFNVKSKIDLFNDAASIRYQSYQLADELRQGSDDLT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RLARTYAVTGDEKYEKMYMDILAIRNGEKPRPEKYHQIYWDLVLSYGDKPKPDGARIAIK
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHH
EQMKSLGFSDEEFRYLEQAQKNSDALVALEVKAMNAVKGIFMDPNTQTYTIKGEPNLTMA
HHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCEECCCCEEEEEECCCCHHHH
RELLHSDQYHREKAKIMQPIDEFFTALDKRTDGEVNGRLDSLHAALNWSQFVLFIVILAA
HHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGGFIIVKSRIVTPLVQTCSELLDIQRSKNLARRISVTTQGEIGEIVNQINLFISSLASS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LSKTDGIAKEVADLAKQTKASIQVSRESSNRVARELDASASAMEEMTTTLVHVSESTSNA
HHHHCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
ESRAAENEAHVTVGKQTVSEALKAMSVLETEFTNTQDSMSHLVNESTQVSNVLSVIKAIA
HHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHH
EQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQDSTKEIDDIVASLQSRTNQVG
HHCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
TSVTQAATLMQKAGVELQRIVAVFEDIRHSTEAIHGINTQVAASTEEQSLVSKEIASSMM
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHEE
VIRDNSREVSQIIEQIESTSISLDNQSQILRTKAGEYQF
EEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2162464; 10952301 [H]