| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is pucA [H]
Identifier: 126174939
GI number: 126174939
Start: 3204111
End: 3205127
Strand: Reverse
Name: pucA [H]
Synonym: Sbal_2732
Alternate gene names: 126174939
Gene position: 3205127-3204111 (Counterclockwise)
Preceding gene: 126174940
Following gene: 126174938
Centisome position: 62.51
GC content: 53.29
Gene sequence:
>1017_bases ATGGATCACCAAATCGAAGATTTTCTAGAGCATTGGTTACCGCTGGCGGATGACGCTTGGGTGCTTGCGGTGATCACCCA AATTCAAGGCTCGGCCTATCGCAAACCTGGCGCCATGATGTTGTTTCATGAGTTTGGTCAAGGCGTGGGTATGTTAAGTG GCGGCTGTTTAGAAGCCGATCTCCGCCGCCATGCCCAAAAGGCCATGCAGACAAAGCAAGTCACGTGCGTGACCTATGAC GCGAGCGATGAGTCCGATGCCAGCTATCGACTCGGCTGTGGCGGCATAGTAGATATCATGTTGATCCCACTCTTAAAAGA GAATCATGATCTTGGTTTGATTGAGCTAGTACAGGCATTTCGCCACGGTCGGTCGGGTTTTTATCAATTGCCATTAGTCA AGGCGGGGACGGATGCGCGCCAATATCAGGCCGCTTTCTACCCCGAAGCGTTGACACCGTTCCCCGCCAGCGATTTTGTC CGCACAGGCGTCTTCACCCAAGAGGCGGGAGAATCGCTGATTATTCCGCTGAGACCGAGATTCCACCTTGGGATTTTTGG CGGTGGTATCGACGCTAAGCCCATTGCCGCCATGGCCGATACCTTAGGCTGGCAAGTGACAGTTTTTGATGGTCGTACCG CCTATGCCAGAGCGGCGGATTTCCCCCATGCCCATATCGTGAAACTTACCGCAGGGGAATTAACCGCGAATCATATCGCC CAATTGGATTGCGCCGTAGTGATGAATCATAACTTGGGCTTAGATGCTGTGGCATTGAAGGTCATTCAAGCCCACCCACT CGCCTATGTCGCCTTGCTTGGCCCTGCCCATAGACGGGATAAAGTGCTTGGGATGGCAGGGCTGAGTACTGAATCTTTTT CTGGGGTGTTTTCTGCCCCCGCTGGACTTGCCCTTGGCGGCGAGTTACCGAGCGCAGTGGCGTTAAGTATTTTGGCCCAA TGCCACGGCGTACTCCATGGTGCGACCTTAAAACATCTCGATGAGATAATGCGTTGA
Upstream 100 bases:
>100_bases GAGCGTTTTTAGTTTCGACGGTTATTTGTTTCGATAGTGTCGACAGTAAAAAAGTGCATTAAGTTTTTCAAATATCCCTA ACCCAATGGAGTCCTTGCGG
Downstream 100 bases:
>100_bases TGACATTGCCGCCAGTGCCAAAGTCTGCAGCGCTAACGTTGGCGGAGCAAACGCCACGTTCATCCAAGCGGCTGTTGATC GTGGTACTTGCGGCGGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: XDHase subunit A [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MDHQIEDFLEHWLPLADDAWVLAVITQIQGSAYRKPGAMMLFHEFGQGVGMLSGGCLEADLRRHAQKAMQTKQVTCVTYD ASDESDASYRLGCGGIVDIMLIPLLKENHDLGLIELVQAFRHGRSGFYQLPLVKAGTDARQYQAAFYPEALTPFPASDFV RTGVFTQEAGESLIIPLRPRFHLGIFGGGIDAKPIAAMADTLGWQVTVFDGRTAYARAADFPHAHIVKLTAGELTANHIA QLDCAVVMNHNLGLDAVALKVIQAHPLAYVALLGPAHRRDKVLGMAGLSTESFSGVFSAPAGLALGGELPSAVALSILAQ CHGVLHGATLKHLDEIMR
Sequences:
>Translated_338_residues MDHQIEDFLEHWLPLADDAWVLAVITQIQGSAYRKPGAMMLFHEFGQGVGMLSGGCLEADLRRHAQKAMQTKQVTCVTYD ASDESDASYRLGCGGIVDIMLIPLLKENHDLGLIELVQAFRHGRSGFYQLPLVKAGTDARQYQAAFYPEALTPFPASDFV RTGVFTQEAGESLIIPLRPRFHLGIFGGGIDAKPIAAMADTLGWQVTVFDGRTAYARAADFPHAHIVKLTAGELTANHIA QLDCAVVMNHNLGLDAVALKVIQAHPLAYVALLGPAHRRDKVLGMAGLSTESFSGVFSAPAGLALGGELPSAVALSILAQ CHGVLHGATLKHLDEIMR >Mature_338_residues MDHQIEDFLEHWLPLADDAWVLAVITQIQGSAYRKPGAMMLFHEFGQGVGMLSGGCLEADLRRHAQKAMQTKQVTCVTYD ASDESDASYRLGCGGIVDIMLIPLLKENHDLGLIELVQAFRHGRSGFYQLPLVKAGTDARQYQAAFYPEALTPFPASDFV RTGVFTQEAGESLIIPLRPRFHLGIFGGGIDAKPIAAMADTLGWQVTVFDGRTAYARAADFPHAHIVKLTAGELTANHIA QLDCAVVMNHNLGLDAVALKVIQAHPLAYVALLGPAHRRDKVLGMAGLSTESFSGVFSAPAGLALGGELPSAVALSILAQ CHGVLHGATLKHLDEIMR
Specific function: Oxidizes hypoxanthine and xanthine to uric acid. PucA subunit could exert a molybdenum cofactor recruiting function [H]
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003777 [H]
Pfam domain/function: PF02625 XdhC_CoxI [H]
EC number: =1.17.1.4 [H]
Molecular weight: Translated: 36370; Mature: 36370
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHQIEDFLEHWLPLADDAWVLAVITQIQGSAYRKPGAMMLFHEFGQGVGMLSGGCLEAD CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHCCCCCCCCCCCHHHH LRRHAQKAMQTKQVTCVTYDASDESDASYRLGCGGIVDIMLIPLLKENHDLGLIELVQAF HHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHH RHGRSGFYQLPLVKAGTDARQYQAAFYPEALTPFPASDFVRTGVFTQEAGESLIIPLRPR HCCCCCEEEECEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHCCCEEEEECCCC FHLGIFGGGIDAKPIAAMADTLGWQVTVFDGRTAYARAADFPHAHIVKLTAGELTANHIA EEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCHHHHHCCCCCEEEEEEECCCHHHHHHH QLDCAVVMNHNLGLDAVALKVIQAHPLAYVALLGPAHRRDKVLGMAGLSTESFSGVFSAP HHEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHCCEEEEECCCCHHCCCCCCCC AGLALGGELPSAVALSILAQCHGVLHGATLKHLDEIMR CCEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHC >Mature Secondary Structure MDHQIEDFLEHWLPLADDAWVLAVITQIQGSAYRKPGAMMLFHEFGQGVGMLSGGCLEAD CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHHCCCCCCCCCCCHHHH LRRHAQKAMQTKQVTCVTYDASDESDASYRLGCGGIVDIMLIPLLKENHDLGLIELVQAF HHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHH RHGRSGFYQLPLVKAGTDARQYQAAFYPEALTPFPASDFVRTGVFTQEAGESLIIPLRPR HCCCCCEEEECEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHCCCEEEEECCCC FHLGIFGGGIDAKPIAAMADTLGWQVTVFDGRTAYARAADFPHAHIVKLTAGELTANHIA EEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCHHHHHCCCCCEEEEEEECCCHHHHHHH QLDCAVVMNHNLGLDAVALKVIQAHPLAYVALLGPAHRRDKVLGMAGLSTESFSGVFSAP HHEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHCCEEEEECCCCHHCCCCCCCC AGLALGGELPSAVALSILAQCHGVLHGATLKHLDEIMR CCEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]