Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

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The map label for this gene is ybbP [H]

Identifier: 126174894

GI number: 126174894

Start: 3148219

End: 3150747

Strand: Reverse

Name: ybbP [H]

Synonym: Sbal_2686

Alternate gene names: 126174894

Gene position: 3150747-3148219 (Counterclockwise)

Preceding gene: 126174895

Following gene: 126174893

Centisome position: 61.45

GC content: 50.57

Gene sequence:

>2529_bases
ATGGAGTTAAGTCTGGCATGGCGCCTGTTTAAGCGCGAGTTACAGCAAGGGCAATTGTTATTGATTATCCTCGCTATTAC
GCTCGCGGTACTATCTGTGAGTGGGTTGGCACGGGTGAGTGAACGGCTGCAAGTGGCGATCACTGGCCAAGCTTCACAGT
TTATTGCCGCCGATCGGATTATCGATTCGCCGGTTAAAATTGATGCGGCGATTTTAACCAAAGCCGAAGATCTTGGGCTT
AAGCATGTGACGAACATGCAATTTAATTCCATGGTCTATTCGGGTGATAAGTTTCAGTTAGTCACAGTTCGTGCTGTAGA
GACGGGTTATCCACTTAAGGGCGACATTGAACTCACCAGCGGTAAAACCAAGGCTTTACCCCAAGCGGGCGAAATCTGGT
TTGAAACTCGCTTAGGTGGACTCCTCGGTTATCCCAAATCCATCGAACTAGGTAACAGCGAATTTGTGCTCAGCAATGAG
ATCAGTCGCTTACCCGACGCGGGCTTTAATCCTTTTGCTTCATCGCCCGTGGTATTGATGCGCATGGAAGATGTCGCCAA
AACGGGAGTGATTCAACCGGGCAGCCGCGTGACCTATCTGTATCAATTTGCTGGTGATGAAGCCTCGCTTACGGCCTTTG
AGCAAAGTGTTAAACCGCTTCTCAATAGCACCCAGCGCTGGGTCGATGTGCAATCCGGTGATTCGCCGATTGCGGGAGCC
GTTAAGCGAGCTGAGCGCTTCCTACTGCTAGCTAGTTTGATGGGCATTGCACTGGCCTGCGCCGCGATAGGCATTGCCGC
CCAGCGTTATTGTCAGCGCCATTACGATGTGGTGGCCATGCTGAAAACCTTTGGCGCCTCGGCAAAGCAAATTCGGTTGT
TGTTTGGCACTCACTTATTGTTAGTGACGTTAATGGGGATTGTGCTTGGCCTTATCGGTGGTGTGTTACTCGATTTTGGG
ATTAGTTATCTATTGCCGCCCGAAATTGCCGCCTATTCGCCGCCACTCACTCGGCCATTACTGCTTGGTGTAAGCACTGG
GCTTATCAGCGCCTTTATGTTTTCGGCTTATCCATTGATGCGCTTACTGGCTATTCCGCCACTACGAGTGCTACAGCGTC
AGTTAGAGGGCCTGCAACTTGGGATGTGGCTGCATCTGCTTTTGAGCTTAGGGGCGATGGCGTTACTGGGCTATTTGTAT
TCCCAAAGTTGGGCTTTGACCCTGACTGTGGTCGCGGCCGTGTTGCTGCTCGGTGTGCTGTTAAGCGTGCTTGGCTTTGT
GATGATACGTTTAGGCCACAGTGTTGGTATGAAAACCACCAATCCATTACAGTTGGCACTGGCAGGGCTCAGACGTCGTG
CGCGGCAAAATGCGGTGCAATTGGTGGGATTTAGCGCTGCACTGGTATTGTTATTGATGATTCTGGCGTTAAGACAAGAC
TTGCTCAACGAGTGGCAAAAACAGTTGCCCGAAAATGCGCCTAACTACTTCCTCGTTAATATTGCGCCTGATGATGCAAA
GCCCTTAAATGATTTCATGACGACTAAGGGGATAGTGGCGACGGACATTTATCCTGTGATCCGTGGCCGTTTAACTCAAA
TTAACGGCGAAGTGCTGATTTCGAATGAACAGTCTGATGCGGGTGAAAAGGGCAGAGTGGGTATTTCCCGCGAGTTAAAC
CTAACGTGGCGTAATACGCTACCGGCCAATAACGAACTGTTAGAGGGGCATTTTAATCAAGCGGCCGATGATGTGTCGGT
GGAATCTGGCGTGGCGGACCGTTTAGGTATTGGCATTGGCGATAAGTTGACTTATGTGATTGATAATCAAGAGCTCACAG
TTAAGGTTGCCAGTATTCGTGCCGTGCACTGGGAAACGCTGCAGCCGAACTTCTTTATGATTTTCACCCAAGAAGCTCTC
GCGCCCTTTGCTTATACCTCGATGGCGAGTTTTTATCTGAATGATCAGCAAGCTACGAATGACCAGTCAACAAATGACCA
GTCAACAAACGGCCAAGCGCTGAGTGCCGATGGTACGCCTAAGGATGCGGTGATCCTTGCGCTTATTCAGCAATTCCCGA
CCATATCGATCATCGATGTGGGCGCTATGGTGGGGCAGTTACGGCAGATCATAGAGCAAGTGTCGCTGTCGCTGACCTTA
GTGCTGGCCTTAGTGTTACTGGCCAGTGCCTTAGTATTGATTGCACAGACTGAAGCGGGCATGGCAACTCGGCAGCGCGA
ACTGGCGGTGCTGCGTACCTTTGGCGCTTCGGGATGGTTATTGCGCAGTGCAACGGGTTTAGAGTTCGCCTTGCTTGGCG
GTATTGCGGGCGTGTTAGCAGTCATAGTGGCCGAATTTGCGTTATATCTACTTAAGACGCAAGTGTTTGAGCTTAATGTG
TATATGCACTGGCCTTGGTGGGGAATTGCCCCTGTTTCTGGCGCTTTAATCGTGGCCTTACTTGGGGTGTGGCGTTGCCG
ACAATTGCTTAGCCAATCTTGCTCTGAGCTATTAAAGGCGGGCAGCTAG

Upstream 100 bases:

>100_bases
TGGCAAAGCGTTGTGAGCGGCAGCTAGTGATGGATAACGGCCATTTACAGGAAGATACGGCGCACACAGCACCGCTCGCC
GATGCTAAGGAGGCTTAATA

Downstream 100 bases:

>100_bases
TGGTTGCTTGCATGGGCTAACACTTGAGTTTATGACGTAAATAGACAGCGTTAACAATTAAAAGCACTGATGCCGCCTAA
GCTCAGTGCTTTTTTTGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 842; Mature: 842

Protein sequence:

>842_residues
MELSLAWRLFKRELQQGQLLLIILAITLAVLSVSGLARVSERLQVAITGQASQFIAADRIIDSPVKIDAAILTKAEDLGL
KHVTNMQFNSMVYSGDKFQLVTVRAVETGYPLKGDIELTSGKTKALPQAGEIWFETRLGGLLGYPKSIELGNSEFVLSNE
ISRLPDAGFNPFASSPVVLMRMEDVAKTGVIQPGSRVTYLYQFAGDEASLTAFEQSVKPLLNSTQRWVDVQSGDSPIAGA
VKRAERFLLLASLMGIALACAAIGIAAQRYCQRHYDVVAMLKTFGASAKQIRLLFGTHLLLVTLMGIVLGLIGGVLLDFG
ISYLLPPEIAAYSPPLTRPLLLGVSTGLISAFMFSAYPLMRLLAIPPLRVLQRQLEGLQLGMWLHLLLSLGAMALLGYLY
SQSWALTLTVVAAVLLLGVLLSVLGFVMIRLGHSVGMKTTNPLQLALAGLRRRARQNAVQLVGFSAALVLLLMILALRQD
LLNEWQKQLPENAPNYFLVNIAPDDAKPLNDFMTTKGIVATDIYPVIRGRLTQINGEVLISNEQSDAGEKGRVGISRELN
LTWRNTLPANNELLEGHFNQAADDVSVESGVADRLGIGIGDKLTYVIDNQELTVKVASIRAVHWETLQPNFFMIFTQEAL
APFAYTSMASFYLNDQQATNDQSTNDQSTNGQALSADGTPKDAVILALIQQFPTISIIDVGAMVGQLRQIIEQVSLSLTL
VLALVLLASALVLIAQTEAGMATRQRELAVLRTFGASGWLLRSATGLEFALLGGIAGVLAVIVAEFALYLLKTQVFELNV
YMHWPWWGIAPVSGALIVALLGVWRCRQLLSQSCSELLKAGS

Sequences:

>Translated_842_residues
MELSLAWRLFKRELQQGQLLLIILAITLAVLSVSGLARVSERLQVAITGQASQFIAADRIIDSPVKIDAAILTKAEDLGL
KHVTNMQFNSMVYSGDKFQLVTVRAVETGYPLKGDIELTSGKTKALPQAGEIWFETRLGGLLGYPKSIELGNSEFVLSNE
ISRLPDAGFNPFASSPVVLMRMEDVAKTGVIQPGSRVTYLYQFAGDEASLTAFEQSVKPLLNSTQRWVDVQSGDSPIAGA
VKRAERFLLLASLMGIALACAAIGIAAQRYCQRHYDVVAMLKTFGASAKQIRLLFGTHLLLVTLMGIVLGLIGGVLLDFG
ISYLLPPEIAAYSPPLTRPLLLGVSTGLISAFMFSAYPLMRLLAIPPLRVLQRQLEGLQLGMWLHLLLSLGAMALLGYLY
SQSWALTLTVVAAVLLLGVLLSVLGFVMIRLGHSVGMKTTNPLQLALAGLRRRARQNAVQLVGFSAALVLLLMILALRQD
LLNEWQKQLPENAPNYFLVNIAPDDAKPLNDFMTTKGIVATDIYPVIRGRLTQINGEVLISNEQSDAGEKGRVGISRELN
LTWRNTLPANNELLEGHFNQAADDVSVESGVADRLGIGIGDKLTYVIDNQELTVKVASIRAVHWETLQPNFFMIFTQEAL
APFAYTSMASFYLNDQQATNDQSTNDQSTNGQALSADGTPKDAVILALIQQFPTISIIDVGAMVGQLRQIIEQVSLSLTL
VLALVLLASALVLIAQTEAGMATRQRELAVLRTFGASGWLLRSATGLEFALLGGIAGVLAVIVAEFALYLLKTQVFELNV
YMHWPWWGIAPVSGALIVALLGVWRCRQLLSQSCSELLKAGS
>Mature_842_residues
MELSLAWRLFKRELQQGQLLLIILAITLAVLSVSGLARVSERLQVAITGQASQFIAADRIIDSPVKIDAAILTKAEDLGL
KHVTNMQFNSMVYSGDKFQLVTVRAVETGYPLKGDIELTSGKTKALPQAGEIWFETRLGGLLGYPKSIELGNSEFVLSNE
ISRLPDAGFNPFASSPVVLMRMEDVAKTGVIQPGSRVTYLYQFAGDEASLTAFEQSVKPLLNSTQRWVDVQSGDSPIAGA
VKRAERFLLLASLMGIALACAAIGIAAQRYCQRHYDVVAMLKTFGASAKQIRLLFGTHLLLVTLMGIVLGLIGGVLLDFG
ISYLLPPEIAAYSPPLTRPLLLGVSTGLISAFMFSAYPLMRLLAIPPLRVLQRQLEGLQLGMWLHLLLSLGAMALLGYLY
SQSWALTLTVVAAVLLLGVLLSVLGFVMIRLGHSVGMKTTNPLQLALAGLRRRARQNAVQLVGFSAALVLLLMILALRQD
LLNEWQKQLPENAPNYFLVNIAPDDAKPLNDFMTTKGIVATDIYPVIRGRLTQINGEVLISNEQSDAGEKGRVGISRELN
LTWRNTLPANNELLEGHFNQAADDVSVESGVADRLGIGIGDKLTYVIDNQELTVKVASIRAVHWETLQPNFFMIFTQEAL
APFAYTSMASFYLNDQQATNDQSTNDQSTNGQALSADGTPKDAVILALIQQFPTISIIDVGAMVGQLRQIIEQVSLSLTL
VLALVLLASALVLIAQTEAGMATRQRELAVLRTFGASGWLLRSATGLEFALLGGIAGVLAVIVAEFALYLLKTQVFELNV
YMHWPWWGIAPVSGALIVALLGVWRCRQLLSQSCSELLKAGS

Specific function: Unknown

COG id: COG3127

COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1786704, Length=821, Percent_Identity=36.6626065773447, Blast_Score=470, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 91394; Mature: 91394

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSLAWRLFKRELQQGQLLLIILAITLAVLSVSGLARVSERLQVAITGQASQFIAADRI
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHH
IDSPVKIDAAILTKAEDLGLKHVTNMQFNSMVYSGDKFQLVTVRAVETGYPLKGDIELTS
HCCCCEEHHHHHHHHHHCCCHHHCCCCCCCEEECCCCEEEEEEEEECCCCCCCCCEEECC
GKTKALPQAGEIWFETRLGGLLGYPKSIELGNSEFVLSNEISRLPDAGFNPFASSPVVLM
CCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCEEECCHHHHCCCCCCCCCCCCCEEEE
RMEDVAKTGVIQPGSRVTYLYQFAGDEASLTAFEQSVKPLLNSTQRWVDVQSGDSPIAGA
EEHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHH
VKRAERFLLLASLMGIALACAAIGIAAQRYCQRHYDVVAMLKTFGASAKQIRLLFGTHLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LVTLMGIVLGLIGGVLLDFGISYLLPPEIAAYSPPLTRPLLLGVSTGLISAFMFSAYPLM
HHHHHHHHHHHHHHHHHHCCHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RLLAIPPLRVLQRQLEGLQLGMWLHLLLSLGAMALLGYLYSQSWALTLTVVAAVLLLGVL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LSVLGFVMIRLGHSVGMKTTNPLQLALAGLRRRARQNAVQLVGFSAALVLLLMILALRQD
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLNEWQKQLPENAPNYFLVNIAPDDAKPLNDFMTTKGIVATDIYPVIRGRLTQINGEVLI
HHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHCHHEEECCEEEE
SNEQSDAGEKGRVGISRELNLTWRNTLPANNELLEGHFNQAADDVSVESGVADRLGIGIG
ECCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHCHHHHCCCCCCHHCCCHHHHCCCCC
DKLTYVIDNQELTVKVASIRAVHWETLQPNFFMIFTQEALAPFAYTSMASFYLNDQQATN
CCEEEEECCCEEEEEEEEEEEEEEEECCCCEEEEEEHHHHCHHHHHHHHHHHCCCCCCCC
DQSTNDQSTNGQALSADGTPKDAVILALIQQFPTISIIDVGAMVGQLRQIIEQVSLSLTL
CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
VLALVLLASALVLIAQTEAGMATRQRELAVLRTFGASGWLLRSATGLEFALLGGIAGVLA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHH
VIVAEFALYLLKTQVFELNVYMHWPWWGIAPVSGALIVALLGVWRCRQLLSQSCSELLKA
HHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GS
CC
>Mature Secondary Structure
MELSLAWRLFKRELQQGQLLLIILAITLAVLSVSGLARVSERLQVAITGQASQFIAADRI
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHH
IDSPVKIDAAILTKAEDLGLKHVTNMQFNSMVYSGDKFQLVTVRAVETGYPLKGDIELTS
HCCCCEEHHHHHHHHHHCCCHHHCCCCCCCEEECCCCEEEEEEEEECCCCCCCCCEEECC
GKTKALPQAGEIWFETRLGGLLGYPKSIELGNSEFVLSNEISRLPDAGFNPFASSPVVLM
CCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCEEECCHHHHCCCCCCCCCCCCCEEEE
RMEDVAKTGVIQPGSRVTYLYQFAGDEASLTAFEQSVKPLLNSTQRWVDVQSGDSPIAGA
EEHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHH
VKRAERFLLLASLMGIALACAAIGIAAQRYCQRHYDVVAMLKTFGASAKQIRLLFGTHLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LVTLMGIVLGLIGGVLLDFGISYLLPPEIAAYSPPLTRPLLLGVSTGLISAFMFSAYPLM
HHHHHHHHHHHHHHHHHHCCHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RLLAIPPLRVLQRQLEGLQLGMWLHLLLSLGAMALLGYLYSQSWALTLTVVAAVLLLGVL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LSVLGFVMIRLGHSVGMKTTNPLQLALAGLRRRARQNAVQLVGFSAALVLLLMILALRQD
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLNEWQKQLPENAPNYFLVNIAPDDAKPLNDFMTTKGIVATDIYPVIRGRLTQINGEVLI
HHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHCHHEEECCEEEE
SNEQSDAGEKGRVGISRELNLTWRNTLPANNELLEGHFNQAADDVSVESGVADRLGIGIG
ECCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHCHHHHCCCCCCHHCCCHHHHCCCCC
DKLTYVIDNQELTVKVASIRAVHWETLQPNFFMIFTQEALAPFAYTSMASFYLNDQQATN
CCEEEEECCCEEEEEEEEEEEEEEEECCCCEEEEEEHHHHCHHHHHHHHHHHCCCCCCCC
DQSTNDQSTNGQALSADGTPKDAVILALIQQFPTISIIDVGAMVGQLRQIIEQVSLSLTL
CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
VLALVLLASALVLIAQTEAGMATRQRELAVLRTFGASGWLLRSATGLEFALLGGIAGVLA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHH
VIVAEFALYLLKTQVFELNVYMHWPWWGIAPVSGALIVALLGVWRCRQLLSQSCSELLKA
HHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]