| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174850
Identifier: 126174850
GI number: 126174850
Start: 3093499
End: 3095346
Strand: Reverse
Name: 126174850
Synonym: Sbal_2637
Alternate gene names: NA
Gene position: 3095346-3093499 (Counterclockwise)
Preceding gene: 126174851
Following gene: 126174849
Centisome position: 60.37
GC content: 49.3
Gene sequence:
>1848_bases ATGAATGCCAGTGAGTTACAACCCGTAGTGCAATTTCTACAAGGGCTAGTGCCTTTTGATACTCTGCCTGAAGATGTTGT GGTGCGCTGTGCTAAGGCTGTCACTGTCGGGTATTACAGTAAAGCCTCTGGTTATGTCAATTTCGATGCTAATTCGCCCA AGTTGTATATGGTGCGTAGCGGCGCCTTTGAGGTGCGCGATCCTGAAGGCGTGCTGGTCGATAGAGTCGGCGAGGGGGAG TTTTTTGGTTTTTCGACCTTGTTATCGGGGGAGAAAGTCGTCAACAAGGTCGCTATTCTCGAAGACGGTTTGGTTTATCA TTTGCCCCAAAGCTTGTTCGATCATCTCAGAAGCGAGAGCCGCAACTTCGATAAATTTTTTACCCGCGCATTTGCTAAAC GTTTACGTCATGAGGCTCGCTTTAAGGCGAAAGATCTGACGACCACTAGCCGGATCAGCACGTTAATGTCATCCGCGCCT ATTGTTATCGATGCCCACGCGAGCGTGACGCAGGCGGCACTCTTAATGCGAAACAGCCGAGTGTCATCCCTGTTGGTCAT GGATAATCACAAGCTAGTTGGGATTTTAACCGATAAGGATTTGCGTAATCGGGTGTTAGCGGCGGGGCTCGACGGCCATA TCGCAGTGCATCAAGCCATGACAGTTTCGCCTATCTCAATTTCATCCAATGCGTTGATTTTTGAAGCCATGTTGCTGATG AGCGAGCATAACATTCATCACTTACCCATTATCGACCAAGATAAAGCTATCGGCATGGTGACCAGTACCGACATCTTGCG CGGGCAGGGCTCGCAACCGCTGCTGTTGATTGGCGAGATTGAACGCCAGCAGGATCTTGCCAGTTTAATTAGCGTCAGTA AGCAAATTCCGCTGTTACTGCAAAATTTGATCAGTGCCGATGCCAGAGCCGAAGAAATTGGCCGAGTATTAACGTCAGTC ACCGATGCGCTGACACGGCGATTAATCGTGCTCAATCAACAATTGCTCGGCGAGCCGCCCATGGCTTTTTGCTGGTTGGC GTTTGGATCGCAGGGACGCCAAGATCAAGCGGCGTGTTCAGATCAAGATAATGGTCTGTTAGTCGCAGAAGAGATGGATG ATTTTGCCAAAGGTTATTTCGATGCCTTAACCCATGCGGTGTGCGCTGGGCTTGACCAATGCGGTTATGAGTTTTGCCCC GGCAACATTATGGCGCAAAACCCACAGTGGCGAATGTCGCTTAAACAGTGGCAACAAGTATTTGAAAAATGGGTAATAAC ACCCGAACCTAAGGCGTTACTGCACGCCAGTATCTTCTTCGACATGCGCTCGGTATACGGCCCACAAACCTTATTTGATG CGCTGCAGGATAAAGTCTTGGCTCAAACCCGTGATAACGATATTTTCCTCGCGGGCATGACAGGCAATTCGCTGGTGGAG TCGCCACCGCTGGGCTTTTTCCGCAAATTTGTCCTCGAACGTGATGGCAGCGAAGTCAAAGGCATAGATTTGAAGCATAA GGGCAATGCTTTAATCAACGATATTGCCCGCGTTTATGCCCTGTCGGCAGGGATCAAAGAAGTGAATACTGCGAAACGTA TCCGTGCCTTGATGGACGCAGACATTCTCAATCGTAAAGATGCGCTTAATCTTGCCGATGCCCACGAGTTTATCGCCCAT ATGCGGTTATCGAACCAAGGTTATCAACATAATCTCGGGCTAGAGGTGAGCAATTATCTGTTACCCGCACATTTATCTTC GCTGGTCCGCCATCAGCTACGTGATGCCTTTAAAGTGGTGCATGAGGCGCAGGCGGGGATGAAGATGAAGTTCATGCGAA GTTTTTGA
Upstream 100 bases:
>100_bases TGCATCCTAAGGCTGACTTTAGTCGAATGTAGCGCAGCGACAATGCAGGCTATAGTGATGACATATAAGTAAAAGTTTCG CCTAAAAGAAGGTGTTGCCT
Downstream 100 bases:
>100_bases TATGAATACACTGCTGCTGAAAACGAAACTTAATTGGCGGGCGCTGCGTTGCCAACATCAGTTATTTAAGGGCTATTATC AATCGCTATTACCTCTGCTG
Product: signal-transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MNASELQPVVQFLQGLVPFDTLPEDVVVRCAKAVTVGYYSKASGYVNFDANSPKLYMVRSGAFEVRDPEGVLVDRVGEGE FFGFSTLLSGEKVVNKVAILEDGLVYHLPQSLFDHLRSESRNFDKFFTRAFAKRLRHEARFKAKDLTTTSRISTLMSSAP IVIDAHASVTQAALLMRNSRVSSLLVMDNHKLVGILTDKDLRNRVLAAGLDGHIAVHQAMTVSPISISSNALIFEAMLLM SEHNIHHLPIIDQDKAIGMVTSTDILRGQGSQPLLLIGEIERQQDLASLISVSKQIPLLLQNLISADARAEEIGRVLTSV TDALTRRLIVLNQQLLGEPPMAFCWLAFGSQGRQDQAACSDQDNGLLVAEEMDDFAKGYFDALTHAVCAGLDQCGYEFCP GNIMAQNPQWRMSLKQWQQVFEKWVITPEPKALLHASIFFDMRSVYGPQTLFDALQDKVLAQTRDNDIFLAGMTGNSLVE SPPLGFFRKFVLERDGSEVKGIDLKHKGNALINDIARVYALSAGIKEVNTAKRIRALMDADILNRKDALNLADAHEFIAH MRLSNQGYQHNLGLEVSNYLLPAHLSSLVRHQLRDAFKVVHEAQAGMKMKFMRSF
Sequences:
>Translated_615_residues MNASELQPVVQFLQGLVPFDTLPEDVVVRCAKAVTVGYYSKASGYVNFDANSPKLYMVRSGAFEVRDPEGVLVDRVGEGE FFGFSTLLSGEKVVNKVAILEDGLVYHLPQSLFDHLRSESRNFDKFFTRAFAKRLRHEARFKAKDLTTTSRISTLMSSAP IVIDAHASVTQAALLMRNSRVSSLLVMDNHKLVGILTDKDLRNRVLAAGLDGHIAVHQAMTVSPISISSNALIFEAMLLM SEHNIHHLPIIDQDKAIGMVTSTDILRGQGSQPLLLIGEIERQQDLASLISVSKQIPLLLQNLISADARAEEIGRVLTSV TDALTRRLIVLNQQLLGEPPMAFCWLAFGSQGRQDQAACSDQDNGLLVAEEMDDFAKGYFDALTHAVCAGLDQCGYEFCP GNIMAQNPQWRMSLKQWQQVFEKWVITPEPKALLHASIFFDMRSVYGPQTLFDALQDKVLAQTRDNDIFLAGMTGNSLVE SPPLGFFRKFVLERDGSEVKGIDLKHKGNALINDIARVYALSAGIKEVNTAKRIRALMDADILNRKDALNLADAHEFIAH MRLSNQGYQHNLGLEVSNYLLPAHLSSLVRHQLRDAFKVVHEAQAGMKMKFMRSF >Mature_615_residues MNASELQPVVQFLQGLVPFDTLPEDVVVRCAKAVTVGYYSKASGYVNFDANSPKLYMVRSGAFEVRDPEGVLVDRVGEGE FFGFSTLLSGEKVVNKVAILEDGLVYHLPQSLFDHLRSESRNFDKFFTRAFAKRLRHEARFKAKDLTTTSRISTLMSSAP IVIDAHASVTQAALLMRNSRVSSLLVMDNHKLVGILTDKDLRNRVLAAGLDGHIAVHQAMTVSPISISSNALIFEAMLLM SEHNIHHLPIIDQDKAIGMVTSTDILRGQGSQPLLLIGEIERQQDLASLISVSKQIPLLLQNLISADARAEEIGRVLTSV TDALTRRLIVLNQQLLGEPPMAFCWLAFGSQGRQDQAACSDQDNGLLVAEEMDDFAKGYFDALTHAVCAGLDQCGYEFCP GNIMAQNPQWRMSLKQWQQVFEKWVITPEPKALLHASIFFDMRSVYGPQTLFDALQDKVLAQTRDNDIFLAGMTGNSLVE SPPLGFFRKFVLERDGSEVKGIDLKHKGNALINDIARVYALSAGIKEVNTAKRIRALMDADILNRKDALNLADAHEFIAH MRLSNQGYQHNLGLEVSNYLLPAHLSSLVRHQLRDAFKVVHEAQAGMKMKFMRSF
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 68323; Mature: 68323
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASELQPVVQFLQGLVPFDTLPEDVVVRCAKAVTVGYYSKASGYVNFDANSPKLYMVRS CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEECCCCEEEECCCCCEEEEEEC GAFEVRDPEGVLVDRVGEGEFFGFSTLLSGEKVVNKVAILEDGLVYHLPQSLFDHLRSES CCEEEECCCCCEEEECCCCCEECHHHHHCHHHHHHHHHHHCCCHHHHCHHHHHHHHHHCC RNFDKFFTRAFAKRLRHEARFKAKDLTTTSRISTLMSSAPIVIDAHASVTQAALLMRNSR CCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCC VSSLLVMDNHKLVGILTDKDLRNRVLAAGLDGHIAVHQAMTVSPISISSNALIFEAMLLM CCEEEEECCCEEEEEECCCHHHHHHHHCCCCCCEEEECCEEECCEECCCCHHHHHHHHHH SEHNIHHLPIIDQDKAIGMVTSTDILRGQGSQPLLLIGEIERQQDLASLISVSKQIPLLL HCCCCEECCEECCCCCCEEEECHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH QNLISADARAEEIGRVLTSVTDALTRRLIVLNQQLLGEPPMAFCWLAFGSQGRQDQAACS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEHHCCCCCCCHHCCC DQDNGLLVAEEMDDFAKGYFDALTHAVCAGLDQCGYEFCPGNIMAQNPQWRMSLKQWQQV CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCHHHCCCEECCCCEEECCCHHHHHHHHHHHH FEKWVITPEPKALLHASIFFDMRSVYGPQTLFDALQDKVLAQTRDNDIFLAGMTGNSLVE HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC SPPLGFFRKFVLERDGSEVKGIDLKHKGNALINDIARVYALSAGIKEVNTAKRIRALMDA CCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH DILNRKDALNLADAHEFIAHMRLSNQGYQHNLGLEVSNYLLPAHLSSLVRHQLRDAFKVV HHHCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HEAQAGMKMKFMRSF HHHHCCCCHHHHHCC >Mature Secondary Structure MNASELQPVVQFLQGLVPFDTLPEDVVVRCAKAVTVGYYSKASGYVNFDANSPKLYMVRS CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEECCCCEEEECCCCCEEEEEEC GAFEVRDPEGVLVDRVGEGEFFGFSTLLSGEKVVNKVAILEDGLVYHLPQSLFDHLRSES CCEEEECCCCCEEEECCCCCEECHHHHHCHHHHHHHHHHHCCCHHHHCHHHHHHHHHHCC RNFDKFFTRAFAKRLRHEARFKAKDLTTTSRISTLMSSAPIVIDAHASVTQAALLMRNSR CCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCC VSSLLVMDNHKLVGILTDKDLRNRVLAAGLDGHIAVHQAMTVSPISISSNALIFEAMLLM CCEEEEECCCEEEEEECCCHHHHHHHHCCCCCCEEEECCEEECCEECCCCHHHHHHHHHH SEHNIHHLPIIDQDKAIGMVTSTDILRGQGSQPLLLIGEIERQQDLASLISVSKQIPLLL HCCCCEECCEECCCCCCEEEECHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH QNLISADARAEEIGRVLTSVTDALTRRLIVLNQQLLGEPPMAFCWLAFGSQGRQDQAACS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEHHCCCCCCCHHCCC DQDNGLLVAEEMDDFAKGYFDALTHAVCAGLDQCGYEFCPGNIMAQNPQWRMSLKQWQQV CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCHHHCCCEECCCCEEECCCHHHHHHHHHHHH FEKWVITPEPKALLHASIFFDMRSVYGPQTLFDALQDKVLAQTRDNDIFLAGMTGNSLVE HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC SPPLGFFRKFVLERDGSEVKGIDLKHKGNALINDIARVYALSAGIKEVNTAKRIRALMDA CCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH DILNRKDALNLADAHEFIAHMRLSNQGYQHNLGLEVSNYLLPAHLSSLVRHQLRDAFKVV HHHCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HEAQAGMKMKFMRSF HHHHCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]