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The map label for this gene is 126174849

Identifier: 126174849

GI number: 126174849

Start: 3092811

End: 3093497

Strand: Reverse

Name: 126174849

Synonym: Sbal_2636

Alternate gene names: NA

Gene position: 3093497-3092811 (Counterclockwise)

Preceding gene: 126174850

Following gene: 126174848

Centisome position: 60.33

GC content: 51.53

Gene sequence:

>687_bases
ATGAATACACTGCTGCTGAAAACGAAACTTAATTGGCGGGCGCTGCGTTGCCAACATCAGTTATTTAAGGGCTATTATCA
ATCGCTATTACCTCTGCTGGCGATGCCGTTATCCGAAGCACCTTTGATGGCGATGGATTTAGAGATGACAGGTCTCAATC
CGCAGCAAGATCAAATCCTCAGTATTGGCTTAGTGCCGATTGAGCGCGGCGAGATCCCTTTGGCGCGCGCCGAACAAAAG
TTAGTGCAAATTCGCGGTAGTGTTGGCCAAAGCGCGACGATCCACGGGATCCTCGATAATCATCTGGTGCAGGCGGTGAC
GATTGAGGCAGCCATGGGCTGGTTTATCAATCAAACCTATGGTCGGGTGCTGGTCGCGCATCATGCTCCGCTAGATTGTC
GCTTTCTGCAGCAGGATTTATTGGCCATTTATCATCAAGCCCTCGTTCTACCCGCCATTGATACACTCATGCTTGAAAGG
CATCGTTTGCTACGGGAACACTCAGTGATTAAAGAGGGCAGTTTGCGCCTTGGCGCTTGCCGCGAACGTTACGGTTTGCC
CATTTATACTGCCCACAGTGCGTTGACCGATGCCTTAGCTTGCGGGGAATTATTATTGGCGCAAATGGCGGCCATGGGCG
GGGCGGGGCAACTTACTGTGGCAGATTTATTGCGGCAATCGACTTAG

Upstream 100 bases:

>100_bases
CATTTATCTTCGCTGGTCCGCCATCAGCTACGTGATGCCTTTAAAGTGGTGCATGAGGCGCAGGCGGGGATGAAGATGAA
GTTCATGCGAAGTTTTTGAT

Downstream 100 bases:

>100_bases
CTGTTTCAGTTTTAACTCACTCTTTGTGGATGAGTTAATCGAGTTGAGGTGATGCTGTTTTACGCTGATTTAACTTTAAT
CTCACTCTGATTTCATCTTA

Product: exonuclease RNase T and DNA polymerase III

Products: NA

Alternate protein names: Exonuclease RNAse T And DNA Polymerase III; DNA Polymerase III Epsilon Subunit; Exonuclease; DNA Polymerase Exonuclease Activity; DNA Polymerase III Subunit; DNA Polymerase III Epsilon Subunit-Like Protein; DNA Polymerase III; Exonuclease Superfamily; DNA Polymerase; 3-5' Exonuclease; Exonuclase; DNA Polymerase III Epsilon-Subunit Paralog

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNTLLLKTKLNWRALRCQHQLFKGYYQSLLPLLAMPLSEAPLMAMDLEMTGLNPQQDQILSIGLVPIERGEIPLARAEQK
LVQIRGSVGQSATIHGILDNHLVQAVTIEAAMGWFINQTYGRVLVAHHAPLDCRFLQQDLLAIYHQALVLPAIDTLMLER
HRLLREHSVIKEGSLRLGACRERYGLPIYTAHSALTDALACGELLLAQMAAMGGAGQLTVADLLRQST

Sequences:

>Translated_228_residues
MNTLLLKTKLNWRALRCQHQLFKGYYQSLLPLLAMPLSEAPLMAMDLEMTGLNPQQDQILSIGLVPIERGEIPLARAEQK
LVQIRGSVGQSATIHGILDNHLVQAVTIEAAMGWFINQTYGRVLVAHHAPLDCRFLQQDLLAIYHQALVLPAIDTLMLER
HRLLREHSVIKEGSLRLGACRERYGLPIYTAHSALTDALACGELLLAQMAAMGGAGQLTVADLLRQST
>Mature_228_residues
MNTLLLKTKLNWRALRCQHQLFKGYYQSLLPLLAMPLSEAPLMAMDLEMTGLNPQQDQILSIGLVPIERGEIPLARAEQK
LVQIRGSVGQSATIHGILDNHLVQAVTIEAAMGWFINQTYGRVLVAHHAPLDCRFLQQDLLAIYHQALVLPAIDTLMLER
HRLLREHSVIKEGSLRLGACRERYGLPIYTAHSALTDALACGELLLAQMAAMGGAGQLTVADLLRQST

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25231; Mature: 25231

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLLLKTKLNWRALRCQHQLFKGYYQSLLPLLAMPLSEAPLMAMDLEMTGLNPQQDQIL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEE
SIGLVPIERGEIPLARAEQKLVQIRGSVGQSATIHGILDNHLVQAVTIEAAMGWFINQTY
EEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
GRVLVAHHAPLDCRFLQQDLLAIYHQALVLPAIDTLMLERHRLLREHSVIKEGSLRLGAC
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RERYGLPIYTAHSALTDALACGELLLAQMAAMGGAGQLTVADLLRQST
HHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNTLLLKTKLNWRALRCQHQLFKGYYQSLLPLLAMPLSEAPLMAMDLEMTGLNPQQDQIL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEE
SIGLVPIERGEIPLARAEQKLVQIRGSVGQSATIHGILDNHLVQAVTIEAAMGWFINQTY
EEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
GRVLVAHHAPLDCRFLQQDLLAIYHQALVLPAIDTLMLERHRLLREHSVIKEGSLRLGAC
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RERYGLPIYTAHSALTDALACGELLLAQMAAMGGAGQLTVADLLRQST
HHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA