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The map label for this gene is ycbZ [C]

Identifier: 126174777

GI number: 126174777

Start: 3006092

End: 3007825

Strand: Direct

Name: ycbZ [C]

Synonym: Sbal_2564

Alternate gene names: 126174777

Gene position: 3006092-3007825 (Clockwise)

Preceding gene: 126174772

Following gene: 126174778

Centisome position: 58.63

GC content: 46.42

Gene sequence:

>1734_bases
ATGAATTCACTCTTGATACCCACGTCTTCACTCGCACCTGAATTTAGCCTGCCAACCCTTTCCGAAACGGCTGCCAATCT
AAGCGCATTGCTCTTAGGGCAAGAGCGCACTGTGGACGCGTTTAAACTCCACCAAGCTATTGTCGATCAACACTTGTATC
TGGCCGATTTCCCGAGCATTGACCGCCAGTTAATGATCAAAGCCTGTATCGATAGCCTTGCACCTTTGTCCCCTGCGTAT
TTAGTGGCGACACGTCCGATTGATAAGGCGGTAACATTTCAGTGGCAGTCCGATAAGCCGCAGGAAAATCAAGGAAGTAT
TGCCGAGAAAACAACTCACTATCGCTACCTGAGTGGCAATATTCGCCGCGCAGATTTAATTGGCCGTATGGCGCAAACAG
GAACAACGAGTCAGTATCAAGCTGGTGCCCTAGCCCAATGCCATTATGTGTTTATTTGCGCCGAGTCGCTGTGGAAACGT
GAAGGTTTATGGGAGTTAGTGATGCAAATCCTCACCCATAAAGAATACCAAATCAGCAGTAACTTAAGTCCTATTCCATT
GAACTGTAAGATAGTTCTGGTTGGTGCTGGGATGATTTATAGCCAAGTCAGAACTGAGGATTGGCAATTTCAACGTCACT
TTACCCTGTTAGCGGAGCTTGCCAGCGAAATAGACTTGGTCCGTTATAAAGAGTCACAATACGTCGCATGGCTGCAAGCG
GTTGCACAAAGTGTGGATGTCACGCTTGAGCAATCAAGCTTAGCGCCACTCTTTCGCTATAGTGCACGGTTAACCGAACA
TCAGCGTCGCCTCAGTTTATCTATGCTCGAGTTCGCCCAACTCATGATGCAAGCTAAAGCCTATCGTGGTAAACCGAGCA
TCAATGCAAGCAGTATTGATCACGCGTTAACCCAAGCCAACTATCGTCATAACAGTTCGGAAGAATATTCGGGCCAGAGC
TTCGATGACAATTTCATAAATCTGCCAACTTCGGGTGCTATGGTTGGCCAGATCAATGGCTTAACTGTGATTGATGCTAT
CGATTATAGCTATGGTGAACCAGCGCGTATCACGGCATCTGTTCACTACGGTGATGGTGAAGTAGCCGATATTGAAAGAA
AATCTGAACTTGGCGGGAATATACATGCCAAAGGCATGATGATCCTTTCAGCCTGTTTGTACCGTATCTTTGGACGAGAT
GCGCCATTACACCTGAATGCCAATATCGTTTTCGAACAGTCCTATCAAGAAATTGATGGCGATAGTGCATCACTCGCAGA
GTACTGCTGTTTGATGTCAGCGATTGCCGAACAACCCATTATTCAATCACTGGCGATTACCGGCGCATTGGATCAATTTG
GTAATGTGCAAGCGATTGGCGGCATCAATGAGAAGATTGAGGGCTTTTTTAATCTGTGTGAACGTCGCGGACTTACGGGA
GAACAAGGCGTTATTATGCCGAAGTCAAACGTATTACAGCTTAATCTCAATCCCAAAGTGATTACAGCTGTAGGCAAAGG
CCTGTTTCACATCTATGCCATTGAGCATATGGACCAAGCGGTTGAGCTATTAATGCAAATGCCAGCGGGTGTTGCCGATG
AAGATAATGATTTCCCACATGATTCACTATATGGTCTCGTGCAGGAACGATTAGACAAGCTCGCGGGAAATGGGGAGGAG
GAAATCGGCCTAATCACGAGATTACTCGCAAAATTGGGATTTTTTCGCCGCTAA

Upstream 100 bases:

>100_bases
ACGAATAATCAGGCAAACAGACGTAAAAACACCTATACAGTGAGAGACTTGTCGTCTTGGTATGGTAAAATCACTGTAAC
TTTTCACGGTAAATGCTTAT

Downstream 100 bases:

>100_bases
TTAGCTGATCGGAGTTGTTTAGCTTACACGTGTTCGCTAACCTTGGCGGCTCTTATTGCTGGAGTAGTAAAACAATGAAT
AAAGCAAACAGTTTCAATAA

Product: ATP-dependent protease

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MNSLLIPTSSLAPEFSLPTLSETAANLSALLLGQERTVDAFKLHQAIVDQHLYLADFPSIDRQLMIKACIDSLAPLSPAY
LVATRPIDKAVTFQWQSDKPQENQGSIAEKTTHYRYLSGNIRRADLIGRMAQTGTTSQYQAGALAQCHYVFICAESLWKR
EGLWELVMQILTHKEYQISSNLSPIPLNCKIVLVGAGMIYSQVRTEDWQFQRHFTLLAELASEIDLVRYKESQYVAWLQA
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLEFAQLMMQAKAYRGKPSINASSIDHALTQANYRHNSSEEYSGQS
FDDNFINLPTSGAMVGQINGLTVIDAIDYSYGEPARITASVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRD
APLHLNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
EQGVIMPKSNVLQLNLNPKVITAVGKGLFHIYAIEHMDQAVELLMQMPAGVADEDNDFPHDSLYGLVQERLDKLAGNGEE
EIGLITRLLAKLGFFRR

Sequences:

>Translated_577_residues
MNSLLIPTSSLAPEFSLPTLSETAANLSALLLGQERTVDAFKLHQAIVDQHLYLADFPSIDRQLMIKACIDSLAPLSPAY
LVATRPIDKAVTFQWQSDKPQENQGSIAEKTTHYRYLSGNIRRADLIGRMAQTGTTSQYQAGALAQCHYVFICAESLWKR
EGLWELVMQILTHKEYQISSNLSPIPLNCKIVLVGAGMIYSQVRTEDWQFQRHFTLLAELASEIDLVRYKESQYVAWLQA
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLEFAQLMMQAKAYRGKPSINASSIDHALTQANYRHNSSEEYSGQS
FDDNFINLPTSGAMVGQINGLTVIDAIDYSYGEPARITASVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRD
APLHLNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
EQGVIMPKSNVLQLNLNPKVITAVGKGLFHIYAIEHMDQAVELLMQMPAGVADEDNDFPHDSLYGLVQERLDKLAGNGEE
EIGLITRLLAKLGFFRR
>Mature_577_residues
MNSLLIPTSSLAPEFSLPTLSETAANLSALLLGQERTVDAFKLHQAIVDQHLYLADFPSIDRQLMIKACIDSLAPLSPAY
LVATRPIDKAVTFQWQSDKPQENQGSIAEKTTHYRYLSGNIRRADLIGRMAQTGTTSQYQAGALAQCHYVFICAESLWKR
EGLWELVMQILTHKEYQISSNLSPIPLNCKIVLVGAGMIYSQVRTEDWQFQRHFTLLAELASEIDLVRYKESQYVAWLQA
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLEFAQLMMQAKAYRGKPSINASSIDHALTQANYRHNSSEEYSGQS
FDDNFINLPTSGAMVGQINGLTVIDAIDYSYGEPARITASVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRD
APLHLNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
EQGVIMPKSNVLQLNLNPKVITAVGKGLFHIYAIEHMDQAVELLMQMPAGVADEDNDFPHDSLYGLVQERLDKLAGNGEE
EIGLITRLLAKLGFFRR

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=441, Percent_Identity=33.5600907029478, Blast_Score=234, Evalue=9e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR008268
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 64057; Mature: 64057

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLLIPTSSLAPEFSLPTLSETAANLSALLLGQERTVDAFKLHQAIVDQHLYLADFPSI
CCCEECCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCEEECCCCC
DRQLMIKACIDSLAPLSPAYLVATRPIDKAVTFQWQSDKPQENQGSIAEKTTHYRYLSGN
HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCEEEECCC
IRRADLIGRMAQTGTTSQYQAGALAQCHYVFICAESLWKREGLWELVMQILTHKEYQISS
CCHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEHHHHHHHCCHHHHHHHHHCCCCEEECC
NLSPIPLNCKIVLVGAGMIYSQVRTEDWQFQRHFTLLAELASEIDLVRYKESQYVAWLQA
CCCCCCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLEFAQLMMQAKAYRGKPSINASSID
HHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
HALTQANYRHNSSEEYSGQSFDDNFINLPTSGAMVGQINGLTVIDAIDYSYGEPARITAS
HHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCEEEEEECCCCCCCCCEEEEE
VHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRDAPLHLNANIVFEQSYQEIDG
EECCCCCEECCHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCHHHCCC
DSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCC
EQGVIMPKSNVLQLNLNPKVITAVGKGLFHIYAIEHMDQAVELLMQMPAGVADEDNDFPH
CCCEEECCCCEEEEECCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
DSLYGLVQERLDKLAGNGEEEIGLITRLLAKLGFFRR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSLLIPTSSLAPEFSLPTLSETAANLSALLLGQERTVDAFKLHQAIVDQHLYLADFPSI
CCCEECCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCEEECCCCC
DRQLMIKACIDSLAPLSPAYLVATRPIDKAVTFQWQSDKPQENQGSIAEKTTHYRYLSGN
HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCEEEECCC
IRRADLIGRMAQTGTTSQYQAGALAQCHYVFICAESLWKREGLWELVMQILTHKEYQISS
CCHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEHHHHHHHCCHHHHHHHHHCCCCEEECC
NLSPIPLNCKIVLVGAGMIYSQVRTEDWQFQRHFTLLAELASEIDLVRYKESQYVAWLQA
CCCCCCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLEFAQLMMQAKAYRGKPSINASSID
HHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
HALTQANYRHNSSEEYSGQSFDDNFINLPTSGAMVGQINGLTVIDAIDYSYGEPARITAS
HHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCEEEEEECCCCCCCCCEEEEE
VHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRDAPLHLNANIVFEQSYQEIDG
EECCCCCEECCHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCHHHCCC
DSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCC
EQGVIMPKSNVLQLNLNPKVITAVGKGLFHIYAIEHMDQAVELLMQMPAGVADEDNDFPH
CCCEEECCCCEEEEECCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
DSLYGLVQERLDKLAGNGEEEIGLITRLLAKLGFFRR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]