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The map label for this gene is vdlD [H]

Identifier: 126174705

GI number: 126174705

Start: 2911506

End: 2911970

Strand: Direct

Name: vdlD [H]

Synonym: Sbal_2492

Alternate gene names: 126174705

Gene position: 2911506-2911970 (Clockwise)

Preceding gene: 126174703

Following gene: 126174706

Centisome position: 56.78

GC content: 46.24

Gene sequence:

>465_bases
ATGTCGCTTACGCCCATTTCTCCAAACACCGAAAATACCTCACGAACCGAAAACTCTGAAGCACAATTCCCAGAAGCGAT
TCAAACGCGAATCGACTCCTCTGAAGCGCGGGTAATCAAAGCGGTATTTCCATCCATCACCAACCATCACAATACGTTAT
TTGGTGGCGAAGCTTTAGCGTGGATGGATGAAACGGCCTTTATTGCTGCAACTCGTTTTTGCCGTAAAACCTTAGTGACT
GTGAGTTCCGATAGAATCGATTTTAAAAAACCTATCCCCGCAGGCACATTAGCCGAACTGATCGCGCGGGTGATCCATGT
CGGTAACACTTCATTGAAAGTTGAAGTGAACATCTATGTCGAAGACATGTATCAAGATCACCGAGAGCATGCCATACGTG
GTGTGTTCACCTTTGTTGCGGTTGACGAACAACGAAATCCCACTCAAGTGTGGACATACGAGTAG

Upstream 100 bases:

>100_bases
TAAAATCTGCTAGAGGCTCAAAGTGAAGTGGTTTTCTATCTTTAAGAATTAAAAATCTCTATAATTCTGCCTTATTTGCT
GCATTACCTTAGGTTGCTGT

Downstream 100 bases:

>100_bases
TTTTTTAGACGATGTAAGCTATAGAACGGCCCGTTATCTCGGGCTTTTCATTACTATCGTGCGATTCGAATCTATTTTGC
AAAACACCGACCAAAGTCTA

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSLTPISPNTENTSRTENSEAQFPEAIQTRIDSSEARVIKAVFPSITNHHNTLFGGEALAWMDETAFIAATRFCRKTLVT
VSSDRIDFKKPIPAGTLAELIARVIHVGNTSLKVEVNIYVEDMYQDHREHAIRGVFTFVAVDEQRNPTQVWTYE

Sequences:

>Translated_154_residues
MSLTPISPNTENTSRTENSEAQFPEAIQTRIDSSEARVIKAVFPSITNHHNTLFGGEALAWMDETAFIAATRFCRKTLVT
VSSDRIDFKKPIPAGTLAELIARVIHVGNTSLKVEVNIYVEDMYQDHREHAIRGVFTFVAVDEQRNPTQVWTYE
>Mature_153_residues
SLTPISPNTENTSRTENSEAQFPEAIQTRIDSSEARVIKAVFPSITNHHNTLFGGEALAWMDETAFIAATRFCRKTLVTV
SSDRIDFKKPIPAGTLAELIARVIHVGNTSLKVEVNIYVEDMYQDHREHAIRGVFTFVAVDEQRNPTQVWTYE

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 17368; Mature: 17236

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTPISPNTENTSRTENSEAQFPEAIQTRIDSSEARVIKAVFPSITNHHNTLFGGEALA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCEEE
WMDETAFIAATRFCRKTLVTVSSDRIDFKKPIPAGTLAELIARVIHVGNTSLKVEVNIYV
HHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEE
EDMYQDHREHAIRGVFTFVAVDEQRNPTQVWTYE
HHHHHHHHHHHHHHHEEEEEECCCCCCCEEEECC
>Mature Secondary Structure 
SLTPISPNTENTSRTENSEAQFPEAIQTRIDSSEARVIKAVFPSITNHHNTLFGGEALA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCEEE
WMDETAFIAATRFCRKTLVTVSSDRIDFKKPIPAGTLAELIARVIHVGNTSLKVEVNIYV
HHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEE
EDMYQDHREHAIRGVFTFVAVDEQRNPTQVWTYE
HHHHHHHHHHHHHHHEEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]