| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is tyrP [H]
Identifier: 126174646
GI number: 126174646
Start: 2834692
End: 2835879
Strand: Direct
Name: tyrP [H]
Synonym: Sbal_2433
Alternate gene names: 126174646
Gene position: 2834692-2835879 (Clockwise)
Preceding gene: 126174645
Following gene: 126174647
Centisome position: 55.29
GC content: 51.18
Gene sequence:
>1188_bases ATGACACAGAATAAAATTTTCGGCAGTTTGCTGCTTATCGCAGGCACCACAATTGGCGCGGGTATGCTGGCTTTGCCTAT CGCATCGGCGGGACTTGGTTTTGGCACGTCCTCCGCCATCATGTTGATCCTGTGGGCGCTAATGGCCTACACGGCACTGC TTATGGTGGAAATCCATCAATTCGCCCCCAGCGATGCCAGCCTTAATCACTTGGCGCAACGCTTATTGGGTCGTAAGGGC CAGTTGATCGCCAATAGCGCCTTGATGTTTTTACTTTACGCCCTTTGCGCCGCCTACATTGCCGGTGGCGGTGAGCAAGT GAACCAAAAGCTGAGCACTTGGCTAGGGCTAAGTTTGCCACCACAGGCTGGCGCCATCCTGTTTACCCTGCTGATTGGGG CGATTGTGGGCATGGGAACTCACTGTGTGGACCTTATCAACCGCGGTTTGTTTGCCCTTAAGCTATTGGCATTACTGCTT ATGTTGGCCTTGTTACTGCCGCAGGTAGAAAGCCCACATTTGCTCGAACTCCCACTCAACCAAGGTTTAATTATCACGGC TATTCCGGTGATTTTTACTTCCTTTGGTTTCCACGGTTCGATTCCATCAGTGGTGCGCTACTTAGGGGTTGAGGTCAAAG CCCTGCGCAGGATCATGCTACTCGGCTCCGCTTTACCACTGGTCATTTATCTTTTGTGGCAAGTAGGTAGCCAAGGTGTA CTGAGCCAAAGCCAATTGCTCGAAAATCAGAGCTTATCGAGCTTTATCAATCAACTGGCGAGCGTACTACACAGCGAATA CTTAAGCAGTGCGATCAGTTTGTTTGCCGATCTCGCCCTTGCGACTTCGTTTTTAGGGGTGAGTTTAGGCTTGTTTGATT TTATGGCCTCAACCTTAAGACGTGAGGATAATTTTTCTGGTCGTAGTTTGACCGCTGCCATCACCTTTTTACCGCCCTTA GGTTTTGCCCTCTTCTACCCCCAAGGTTTTATCACAGCCCTGGGTTATGCGGCGATTGCGCTGGTGATCCTCGCCATCTT TTTACCTGTAGCCATGGTGTGGACACAGCGCCAGACGCGAGATGCGGCCAATATGCCGACGGGATATCGGGTCGCGGGCG GTAAGTTTACCTTAATGCTCGCCACACTTTGCGGAATAGTGGTTATCGCCGCGCAGATGTTTAGCTAG
Upstream 100 bases:
>100_bases AATCGTTTCATAATTGAATCGCAGCAAAATATTTTATGACAGTTGCTTTCGGATCAAGTCTTTAGCTCTTTTTCATCCGA CACGCTTTTGAGATTATGTT
Downstream 100 bases:
>100_bases TCGCAATTCACTCACCAAGAGTTATTTAATCAAAAGTTAGCTAGCCCCAATTCACTAGCCTTATTCGCTAGCTCGAATAA AAGATTAGGTACAAGAGTCT
Product: aromatic amino acid transporter
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease [H]
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTQNKIFGSLLLIAGTTIGAGMLALPIASAGLGFGTSSAIMLILWALMAYTALLMVEIHQFAPSDASLNHLAQRLLGRKG QLIANSALMFLLYALCAAYIAGGGEQVNQKLSTWLGLSLPPQAGAILFTLLIGAIVGMGTHCVDLINRGLFALKLLALLL MLALLLPQVESPHLLELPLNQGLIITAIPVIFTSFGFHGSIPSVVRYLGVEVKALRRIMLLGSALPLVIYLLWQVGSQGV LSQSQLLENQSLSSFINQLASVLHSEYLSSAISLFADLALATSFLGVSLGLFDFMASTLRREDNFSGRSLTAAITFLPPL GFALFYPQGFITALGYAAIALVILAIFLPVAMVWTQRQTRDAANMPTGYRVAGGKFTLMLATLCGIVVIAAQMFS
Sequences:
>Translated_395_residues MTQNKIFGSLLLIAGTTIGAGMLALPIASAGLGFGTSSAIMLILWALMAYTALLMVEIHQFAPSDASLNHLAQRLLGRKG QLIANSALMFLLYALCAAYIAGGGEQVNQKLSTWLGLSLPPQAGAILFTLLIGAIVGMGTHCVDLINRGLFALKLLALLL MLALLLPQVESPHLLELPLNQGLIITAIPVIFTSFGFHGSIPSVVRYLGVEVKALRRIMLLGSALPLVIYLLWQVGSQGV LSQSQLLENQSLSSFINQLASVLHSEYLSSAISLFADLALATSFLGVSLGLFDFMASTLRREDNFSGRSLTAAITFLPPL GFALFYPQGFITALGYAAIALVILAIFLPVAMVWTQRQTRDAANMPTGYRVAGGKFTLMLATLCGIVVIAAQMFS >Mature_394_residues TQNKIFGSLLLIAGTTIGAGMLALPIASAGLGFGTSSAIMLILWALMAYTALLMVEIHQFAPSDASLNHLAQRLLGRKGQ LIANSALMFLLYALCAAYIAGGGEQVNQKLSTWLGLSLPPQAGAILFTLLIGAIVGMGTHCVDLINRGLFALKLLALLLM LALLLPQVESPHLLELPLNQGLIITAIPVIFTSFGFHGSIPSVVRYLGVEVKALRRIMLLGSALPLVIYLLWQVGSQGVL SQSQLLENQSLSSFINQLASVLHSEYLSSAISLFADLALATSFLGVSLGLFDFMASTLRREDNFSGRSLTAAITFLPPLG FALFYPQGFITALGYAAIALVILAIFLPVAMVWTQRQTRDAANMPTGYRVAGGKFTLMLATLCGIVVIAAQMFS
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane [H]
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788218, Length=394, Percent_Identity=50, Blast_Score=375, Evalue=1e-105, Organism=Escherichia coli, GI1790145, Length=398, Percent_Identity=28.894472361809, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI1789552, Length=362, Percent_Identity=28.1767955801105, Blast_Score=166, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 42045; Mature: 41914
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: PS00594 AROMATIC_AA_PERMEASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNKIFGSLLLIAGTTIGAGMLALPIASAGLGFGTSSAIMLILWALMAYTALLMVEIHQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FAPSDASLNHLAQRLLGRKGQLIANSALMFLLYALCAAYIAGGGEQVNQKLSTWLGLSLP HCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC PQAGAILFTLLIGAIVGMGTHCVDLINRGLFALKLLALLLMLALLLPQVESPHLLELPLN CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC QGLIITAIPVIFTSFGFHGSIPSVVRYLGVEVKALRRIMLLGSALPLVIYLLWQVGSQGV CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LSQSQLLENQSLSSFINQLASVLHSEYLSSAISLFADLALATSFLGVSLGLFDFMASTLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REDNFSGRSLTAAITFLPPLGFALFYPQGFITALGYAAIALVILAIFLPVAMVWTQRQTR HCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAANMPTGYRVAGGKFTLMLATLCGIVVIAAQMFS HHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TQNKIFGSLLLIAGTTIGAGMLALPIASAGLGFGTSSAIMLILWALMAYTALLMVEIHQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FAPSDASLNHLAQRLLGRKGQLIANSALMFLLYALCAAYIAGGGEQVNQKLSTWLGLSLP HCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC PQAGAILFTLLIGAIVGMGTHCVDLINRGLFALKLLALLLMLALLLPQVESPHLLELPLN CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC QGLIITAIPVIFTSFGFHGSIPSVVRYLGVEVKALRRIMLLGSALPLVIYLLWQVGSQGV CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LSQSQLLENQSLSSFINQLASVLHSEYLSSAISLFADLALATSFLGVSLGLFDFMASTLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REDNFSGRSLTAAITFLPPLGFALFYPQGFITALGYAAIALVILAIFLPVAMVWTQRQTR HCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAANMPTGYRVAGGKFTLMLATLCGIVVIAAQMFS HHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3049553; 9097040; 9278503 [H]