| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is ydfG [H]
Identifier: 126174544
GI number: 126174544
Start: 2716638
End: 2717087
Strand: Direct
Name: ydfG [H]
Synonym: Sbal_2331
Alternate gene names: 126174544
Gene position: 2716638-2717087 (Clockwise)
Preceding gene: 126174543
Following gene: 126174546
Centisome position: 52.98
GC content: 50.44
Gene sequence:
>450_bases ATGTCAGAACGTATACCACGCCAGCAAATTTATCAGCTACAACCCGCACTCGCCAACGCACTGTTAAGCTTAGACAAAGC AGCCGGGGACTCCCACTTTGCGCCATTACTGGTGCATTTAGTCAAGCTTAGAGCATCGCAACTCAATGGCTGCGCGTTTT GTCAGCGAAGGCACGCCGAGGAAGCCAGAAGTGACGGTGAAGAACAACTGCGTTTAGATTTACTTGCCGCTTGGCAGGAG GTCGATGGACTTTTTAATGAACGGGAACGCGCAGCGCTGCTCTGGACAGAAATCTTAACCCAAGTTGCTACTGCACCCGT GCATGACAGTCAGTATGCGGCGATTGCAGAGCATTATTCCGAGAAAGAAATTGTTGACCTCACCAGCTTAATCATTGCCA TTAATGGCTGGAACCGCATCGCGATCGCCTTCCACTTGCAACCCATATAG
Upstream 100 bases:
>100_bases CAAACGCCAGGGCAATACAAAAAGCGTAAAATGTCGCAAATCTCCAATCCTACGTCGCGCTAACCGCTTAGATTGAAGCC TCAGCTAATAGGAGGCTTTT
Downstream 100 bases:
>100_bases CAGCAAATAAATGGACAATAAAAAGGGCACCTAATGCGGTGCCCTGTTTGTTGGTATCACTATGCCGTTCGTATCGCTAT GCCGTTAACTTAAGGTCAGC
Product: alkylhydroperoxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSERIPRQQIYQLQPALANALLSLDKAAGDSHFAPLLVHLVKLRASQLNGCAFCQRRHAEEARSDGEEQLRLDLLAAWQE VDGLFNERERAALLWTEILTQVATAPVHDSQYAAIAEHYSEKEIVDLTSLIIAINGWNRIAIAFHLQPI
Sequences:
>Translated_149_residues MSERIPRQQIYQLQPALANALLSLDKAAGDSHFAPLLVHLVKLRASQLNGCAFCQRRHAEEARSDGEEQLRLDLLAAWQE VDGLFNERERAALLWTEILTQVATAPVHDSQYAAIAEHYSEKEIVDLTSLIIAINGWNRIAIAFHLQPI >Mature_148_residues SERIPRQQIYQLQPALANALLSLDKAAGDSHFAPLLVHLVKLRASQLNGCAFCQRRHAEEARSDGEEQLRLDLLAAWQEV DGLFNERERAALLWTEILTQVATAPVHDSQYAAIAEHYSEKEIVDLTSLIIAINGWNRIAIAFHLQPI
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004675 - InterPro: IPR003779 [H]
Pfam domain/function: PF02627 CMD [H]
EC number: NA
Molecular weight: Translated: 16748; Mature: 16617
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERIPRQQIYQLQPALANALLSLDKAAGDSHFAPLLVHLVKLRASQLNGCAFCQRRHAE CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH EARSDGEEQLRLDLLAAWQEVDGLFNERERAALLWTEILTQVATAPVHDSQYAAIAEHYS HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC EKEIVDLTSLIIAINGWNRIAIAFHLQPI CHHHHHHHHHHHEECCCCEEEEEEEECCC >Mature Secondary Structure SERIPRQQIYQLQPALANALLSLDKAAGDSHFAPLLVHLVKLRASQLNGCAFCQRRHAE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH EARSDGEEQLRLDLLAAWQEVDGLFNERERAALLWTEILTQVATAPVHDSQYAAIAEHYS HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC EKEIVDLTSLIIAINGWNRIAIAFHLQPI CHHHHHHHHHHHEECCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]