| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is nadA [H]
Identifier: 126174435
GI number: 126174435
Start: 2566811
End: 2567878
Strand: Reverse
Name: nadA [H]
Synonym: Sbal_2219
Alternate gene names: 126174435
Gene position: 2567878-2566811 (Counterclockwise)
Preceding gene: 126174436
Following gene: 126174432
Centisome position: 50.08
GC content: 50.47
Gene sequence:
>1068_bases ATGAGTCAGTTTGCCCCCAGCATAGAAACCATTGATTACCCGTTTCCGCCTAAGCCAGTTCCTTTGTCCGATGCGCAAAA AGCCGATTACAAGGCGCGTATCAAACAACTGCTCATTGAAAAAGATGCCGTTCTGGTTGCCCACTATTATACCGATCCTG AAATCCAAGCCCTTGCCGAAGAAACCGGCGGCTGCGTTTCAGACTCCTTAGAAATGGCGCGCTTTGGCCGCGATCACCCA GCAAAAACCTTAATCGTTGCTGGGGTCAAGTTTATGGGCGAAACCGCCAAGATTTTGAGCCCAGAAAAAACCATTTTAAT GCCGACCTTAGAAGCCACTTGTTCATTGGACTTAGGTTGTCCAATCGATAAGTTCAGTGCTTTTTGCGATGCGCACCCAG ATCATACTGTGGTGGTTTACGCCAATACTTCGGCTGCCGTTAAAGCGCGCGCCGACTGGGTGGTGACCTCTAGTATTGCC CTCGAAATCGTTGAGCACTTAGACAGCGAAGGTAAAAAGATCATTTGGGGTCCAGACCGTCATTTGGGCAGCTATATTGC TAAACAGACGGGCGCCGAAATGTTGATGTGGCAGGGCGATTGTATCGTTCACGACGAGTTTAAATCGAACGCGCTGCGCG ATATGAAAAGCGTTTACCCAGATGCGGCTATCCTTGTGCACCCTGAGTCGCCAGCCAGTGTGGTGGCGATGGCTGATGCC GTTGGCTCGACCAGTCAGCTGATCAAAGCGGCGCAGACAATGCCGAATGAGCGTTTTATCGTGGCAACCGATCGCGGTAT CTTCTATAAAATGCAGCAGGCGGCGCCAGGTAAAATCTTAATCGAAGCGCCAACCGGCGGTAACGGTGCAACCTGTAAGA GCTGTGCCCACTGTCCTTGGATGGCGATGAACGGTCTACAGGCCATTGAAGCGTCACTCGCCGACAGCGATAAAACCACC CATGAGATTTTTGTGGATGAAGACTTAAGAGTTAAAGCGCTGATCCCGCTGACGCGCATGTTGGATTTTGCTAAGACACT GAATATGAAAGTGAAGGGTAATGCCTAA
Upstream 100 bases:
>100_bases GCTTTAGAGCGTCCTTTTTTATTTGCTTTGCACAAATGGGTTAATCTTTTGATCCCGATTACGTATAATTCCCGGACGTA GTTATCCTGATGGATGTGTT
Downstream 100 bases:
>100_bases ACATGGCTAAGTCCCTTCTTTAGCTGTTCTCCAGTGTCATAAAAATCCCCGCCATAGAGTGGGGATTTTTATGGCTGAAA TTTAAGGTAATAAAAAGCCC
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSQFAPSIETIDYPFPPKPVPLSDAQKADYKARIKQLLIEKDAVLVAHYYTDPEIQALAEETGGCVSDSLEMARFGRDHP AKTLIVAGVKFMGETAKILSPEKTILMPTLEATCSLDLGCPIDKFSAFCDAHPDHTVVVYANTSAAVKARADWVVTSSIA LEIVEHLDSEGKKIIWGPDRHLGSYIAKQTGAEMLMWQGDCIVHDEFKSNALRDMKSVYPDAAILVHPESPASVVAMADA VGSTSQLIKAAQTMPNERFIVATDRGIFYKMQQAAPGKILIEAPTGGNGATCKSCAHCPWMAMNGLQAIEASLADSDKTT HEIFVDEDLRVKALIPLTRMLDFAKTLNMKVKGNA
Sequences:
>Translated_355_residues MSQFAPSIETIDYPFPPKPVPLSDAQKADYKARIKQLLIEKDAVLVAHYYTDPEIQALAEETGGCVSDSLEMARFGRDHP AKTLIVAGVKFMGETAKILSPEKTILMPTLEATCSLDLGCPIDKFSAFCDAHPDHTVVVYANTSAAVKARADWVVTSSIA LEIVEHLDSEGKKIIWGPDRHLGSYIAKQTGAEMLMWQGDCIVHDEFKSNALRDMKSVYPDAAILVHPESPASVVAMADA VGSTSQLIKAAQTMPNERFIVATDRGIFYKMQQAAPGKILIEAPTGGNGATCKSCAHCPWMAMNGLQAIEASLADSDKTT HEIFVDEDLRVKALIPLTRMLDFAKTLNMKVKGNA >Mature_354_residues SQFAPSIETIDYPFPPKPVPLSDAQKADYKARIKQLLIEKDAVLVAHYYTDPEIQALAEETGGCVSDSLEMARFGRDHPA KTLIVAGVKFMGETAKILSPEKTILMPTLEATCSLDLGCPIDKFSAFCDAHPDHTVVVYANTSAAVKARADWVVTSSIAL EIVEHLDSEGKKIIWGPDRHLGSYIAKQTGAEMLMWQGDCIVHDEFKSNALRDMKSVYPDAAILVHPESPASVVAMADAV GSTSQLIKAAQTMPNERFIVATDRGIFYKMQQAAPGKILIEAPTGGNGATCKSCAHCPWMAMNGLQAIEASLADSDKTTH EIFVDEDLRVKALIPLTRMLDFAKTLNMKVKGNA
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=340, Percent_Identity=73.5294117647059, Blast_Score=537, Evalue=1e-154,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 38567; Mature: 38436
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFAPSIETIDYPFPPKPVPLSDAQKADYKARIKQLLIEKDAVLVAHYYTDPEIQALAE CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHH ETGGCVSDSLEMARFGRDHPAKTLIVAGVKFMGETAKILSPEKTILMPTLEATCSLDLGC HHCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCCHHHHCCCCCEEEEEECHHHEEECCCC PIDKFSAFCDAHPDHTVVVYANTSAAVKARADWVVTSSIALEIVEHLDSEGKKIIWGPDR CHHHHHHHHCCCCCCEEEEEECCCCEEEECCCEEEEHHHHHHHHHHHCCCCCEEEECCCH HLGSYIAKQTGAEMLMWQGDCIVHDEFKSNALRDMKSVYPDAAILVHPESPASVVAMADA HHHHHHHHHCCCCEEEECCCEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHH VGSTSQLIKAAQTMPNERFIVATDRGIFYKMQQAAPGKILIEAPTGGNGATCKSCAHCPW CCCHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCHHHCCCCH MAMNGLQAIEASLADSDKTTHEIFVDEDLRVKALIPLTRMLDFAKTLNMKVKGNA HHHCCHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHCCEEEECCC >Mature Secondary Structure SQFAPSIETIDYPFPPKPVPLSDAQKADYKARIKQLLIEKDAVLVAHYYTDPEIQALAE CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHH ETGGCVSDSLEMARFGRDHPAKTLIVAGVKFMGETAKILSPEKTILMPTLEATCSLDLGC HHCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCCHHHHCCCCCEEEEEECHHHEEECCCC PIDKFSAFCDAHPDHTVVVYANTSAAVKARADWVVTSSIALEIVEHLDSEGKKIIWGPDR CHHHHHHHHCCCCCCEEEEEECCCCEEEECCCEEEEHHHHHHHHHHHCCCCCEEEECCCH HLGSYIAKQTGAEMLMWQGDCIVHDEFKSNALRDMKSVYPDAAILVHPESPASVVAMADA HHHHHHHHHCCCCEEEECCCEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHH VGSTSQLIKAAQTMPNERFIVATDRGIFYKMQQAAPGKILIEAPTGGNGATCKSCAHCPW CCCHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCHHHCCCCH MAMNGLQAIEASLADSDKTTHEIFVDEDLRVKALIPLTRMLDFAKTLNMKVKGNA HHHCCHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]