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The map label for this gene is yfcC [H]

Identifier: 126174209

GI number: 126174209

Start: 2301552

End: 2302997

Strand: Reverse

Name: yfcC [H]

Synonym: Sbal_1985

Alternate gene names: 126174209

Gene position: 2302997-2301552 (Counterclockwise)

Preceding gene: 126174210

Following gene: 126174208

Centisome position: 44.92

GC content: 45.5

Gene sequence:

>1446_bases
ATGAAATTACCTACTGCAAGGGCAATGCCCGACGCTTTTGTTATTTTATTTTTTATCGTTTTAGCTGCCGCAATAAGCAG
TTACCTGTTTCCAGCGGGTTGGTTTGCTATGGTCGATATCGTTGATAGCGCTGGCAACATCACTCAAAGAATCGATCCAC
AACAGTTTTTCATGACATACGATAACACGCATCATGTCAGTCTATTTTCAGCCAACGACAAAACGGGGCTGACCAATTTT
GCCTTCGACGGCATGACATCAGGCGATCGCATGGGCTCGGCCGTTGGCGTCATGGCATTTATCCTTATCGTGGGTGGTGC
CTTTGGTGTCGTCATGGACACTGGCGCCATTACTCATTGCATTATGGCGATGATCGCCAAACTGCAGCGCAGCCAAGTAT
TACTGATCCCATTACTGTTTATAATATTTTCATTAAGCGGCGCGATATACGGCATGAGTGAAGAGGCCATTGCATTTTGC
ATTGTACTGTTACCGCTTTTTCAGGCTTTAGGTTATTCAGCAGCAACTGTGGTCATGGTCACCTACTTATCCACCCAAAT
TGGATTTGCTACCTCATGGATGAATCCATTTAGCGTGGCCATTGCGCAAGGGATTGCCGGTGTACCTTTAATGTCTGGCG
CTGATTTACGGATTGCAGCTTGGTTTGTTTTCACTGTTGTCGGCTTAATTTTTACCCTGCGCTACGCTAAAAAACATCGC
TCGGCAGTGGATGCCACACTCGTGCATGCTAAAGATAAGCCATTGAATAATAAATGTTCTTACTTTGACATTCTCGTGTT
GCTTTGTTTACTCGGCGTAATTATGTGGGTGATTTGGGGAGTGGTAAACCAAGGCTATTATATTCCGCAAATCGCCAGTC
AATTTTTTGCACTGGCCTTGGTTGTTGGGCTGATTGCCGTTATTTGGCGAAAACGTAGCTTGAACCAAATCTCAAGTGCC
TTTCAAAAAGGCGCCAGTGAATTGTTACCCGCTGCTATGATTGTGGGATTCGCCAAAGGTGTGGTGTTATTGCTTGGCGG
CGATGACCCACAACAGCCCTCTATTCTTAACACTGCCTTACATTATGCCGGCGAGTCCTTGGCAACGTTACCTGATGTCA
CCTCTGCCATTGTTATGTATATATTTCAATCTATTATGAATTTCTTTGTCGCATCAGGTTCCGGTCAAGCCGCCCTGACC
ATGCCTATCATGGCGCCGCTTTCCGATATTGCAGGCGTCACCCGCCAAGTATCAGTGCTTTGTTTTCAGTTTGGTGATGG
ACTGACAAATTTAGTGATCCCCACTTCAGCCTCATTAATGGGTTGTTTAGGTGTGGCTAAAATTTCATACGCTCAATGGC
TTGCGCTTGTTTGGCGCTTTCAACTATTACTGACCTTGATGGCCAGTGCCGTCATTTTATTTGCCGTTATTACAGGATAT
AGCTGA

Upstream 100 bases:

>100_bases
ACGTTATACCTTCAAGTTTTAATGTACTGACTTGAGGCATTGGCCGCAGCGTTTAATTGTGGCCAATGCCTTATTCTGAC
ACTTTATAAAGGCACATAGG

Downstream 100 bases:

>100_bases
TGTTAACTTTAATCCGTAACGCCGCCGTTTATGCGCCGCAGTTTTTAGGGCTACGCGACGTGTTATTTTGCGAGGCGAAA
GTCCTTAAAATCGCCCCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MKLPTARAMPDAFVILFFIVLAAAISSYLFPAGWFAMVDIVDSAGNITQRIDPQQFFMTYDNTHHVSLFSANDKTGLTNF
AFDGMTSGDRMGSAVGVMAFILIVGGAFGVVMDTGAITHCIMAMIAKLQRSQVLLIPLLFIIFSLSGAIYGMSEEAIAFC
IVLLPLFQALGYSAATVVMVTYLSTQIGFATSWMNPFSVAIAQGIAGVPLMSGADLRIAAWFVFTVVGLIFTLRYAKKHR
SAVDATLVHAKDKPLNNKCSYFDILVLLCLLGVIMWVIWGVVNQGYYIPQIASQFFALALVVGLIAVIWRKRSLNQISSA
FQKGASELLPAAMIVGFAKGVVLLLGGDDPQQPSILNTALHYAGESLATLPDVTSAIVMYIFQSIMNFFVASGSGQAALT
MPIMAPLSDIAGVTRQVSVLCFQFGDGLTNLVIPTSASLMGCLGVAKISYAQWLALVWRFQLLLTLMASAVILFAVITGY
S

Sequences:

>Translated_481_residues
MKLPTARAMPDAFVILFFIVLAAAISSYLFPAGWFAMVDIVDSAGNITQRIDPQQFFMTYDNTHHVSLFSANDKTGLTNF
AFDGMTSGDRMGSAVGVMAFILIVGGAFGVVMDTGAITHCIMAMIAKLQRSQVLLIPLLFIIFSLSGAIYGMSEEAIAFC
IVLLPLFQALGYSAATVVMVTYLSTQIGFATSWMNPFSVAIAQGIAGVPLMSGADLRIAAWFVFTVVGLIFTLRYAKKHR
SAVDATLVHAKDKPLNNKCSYFDILVLLCLLGVIMWVIWGVVNQGYYIPQIASQFFALALVVGLIAVIWRKRSLNQISSA
FQKGASELLPAAMIVGFAKGVVLLLGGDDPQQPSILNTALHYAGESLATLPDVTSAIVMYIFQSIMNFFVASGSGQAALT
MPIMAPLSDIAGVTRQVSVLCFQFGDGLTNLVIPTSASLMGCLGVAKISYAQWLALVWRFQLLLTLMASAVILFAVITGY
S
>Mature_481_residues
MKLPTARAMPDAFVILFFIVLAAAISSYLFPAGWFAMVDIVDSAGNITQRIDPQQFFMTYDNTHHVSLFSANDKTGLTNF
AFDGMTSGDRMGSAVGVMAFILIVGGAFGVVMDTGAITHCIMAMIAKLQRSQVLLIPLLFIIFSLSGAIYGMSEEAIAFC
IVLLPLFQALGYSAATVVMVTYLSTQIGFATSWMNPFSVAIAQGIAGVPLMSGADLRIAAWFVFTVVGLIFTLRYAKKHR
SAVDATLVHAKDKPLNNKCSYFDILVLLCLLGVIMWVIWGVVNQGYYIPQIASQFFALALVVGLIAVIWRKRSLNQISSA
FQKGASELLPAAMIVGFAKGVVLLLGGDDPQQPSILNTALHYAGESLATLPDVTSAIVMYIFQSIMNFFVASGSGQAALT
MPIMAPLSDIAGVTRQVSVLCFQFGDGLTNLVIPTSASLMGCLGVAKISYAQWLALVWRFQLLLTLMASAVILFAVITGY
S

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=497, Percent_Identity=44.8692152917505, Blast_Score=439, Evalue=1e-124,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 51675; Mature: 51675

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPTARAMPDAFVILFFIVLAAAISSYLFPAGWFAMVDIVDSAGNITQRIDPQQFFMTY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHCCCHHHHHEEE
DNTHHVSLFSANDKTGLTNFAFDGMTSGDRMGSAVGVMAFILIVGGAFGVVMDTGAITHC
CCCEEEEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHH
IMAMIAKLQRSQVLLIPLLFIIFSLSGAIYGMSEEAIAFCIVLLPLFQALGYSAATVVMV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
TYLSTQIGFATSWMNPFSVAIAQGIAGVPLMSGADLRIAAWFVFTVVGLIFTLRYAKKHR
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SAVDATLVHAKDKPLNNKCSYFDILVLLCLLGVIMWVIWGVVNQGYYIPQIASQFFALAL
HHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHH
VVGLIAVIWRKRSLNQISSAFQKGASELLPAAMIVGFAKGVVLLLGGDDPQQPSILNTAL
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHH
HYAGESLATLPDVTSAIVMYIFQSIMNFFVASGSGQAALTMPIMAPLSDIAGVTRQVSVL
HHCCCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
CFQFGDGLTNLVIPTSASLMGCLGVAKISYAQWLALVWRFQLLLTLMASAVILFAVITGY
HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
S
C
>Mature Secondary Structure
MKLPTARAMPDAFVILFFIVLAAAISSYLFPAGWFAMVDIVDSAGNITQRIDPQQFFMTY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHCCCHHHHHEEE
DNTHHVSLFSANDKTGLTNFAFDGMTSGDRMGSAVGVMAFILIVGGAFGVVMDTGAITHC
CCCEEEEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHH
IMAMIAKLQRSQVLLIPLLFIIFSLSGAIYGMSEEAIAFCIVLLPLFQALGYSAATVVMV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
TYLSTQIGFATSWMNPFSVAIAQGIAGVPLMSGADLRIAAWFVFTVVGLIFTLRYAKKHR
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SAVDATLVHAKDKPLNNKCSYFDILVLLCLLGVIMWVIWGVVNQGYYIPQIASQFFALAL
HHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHH
VVGLIAVIWRKRSLNQISSAFQKGASELLPAAMIVGFAKGVVLLLGGDDPQQPSILNTAL
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHH
HYAGESLATLPDVTSAIVMYIFQSIMNFFVASGSGQAALTMPIMAPLSDIAGVTRQVSVL
HHCCCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
CFQFGDGLTNLVIPTSASLMGCLGVAKISYAQWLALVWRFQLLLTLMASAVILFAVITGY
HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 7883769 [H]