| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yuxL [H]
Identifier: 126174145
GI number: 126174145
Start: 2229887
End: 2231935
Strand: Direct
Name: yuxL [H]
Synonym: Sbal_1919
Alternate gene names: 126174145
Gene position: 2229887-2231935 (Clockwise)
Preceding gene: 126174144
Following gene: 126174146
Centisome position: 43.49
GC content: 47.63
Gene sequence:
>2049_bases ATGAAAATAGCTCCTCTCCTATTGGCGCTCGGCGCCGCAGGCTTGGCGTTATCAGCCCAAGCGGCCGATCCAACGCCTTT TACTGTGCAACAACTCATTAAACTCAATAAGATGCATTCTGCGACAGTGTCCCACGATGGCACTAAATTAGTTTATGGTC TTAAAACGGTAAACGATAAGGGAGAGGGCAGTTCTGATCTGTATCTATTGGATCTGACTGACACGAAAGCGAAACCGTTA CAACTGACCTCTGCTGCGGGCACTGAGCACGATGTGAGTTTCGCCACTGACGACAAGTCGATTTATTTCCTTGCCGGTCG TAGCGGTTCAAGCCAGCTATTCCAACTGCCATTAACGGGCGGTGAAGCGGTTCAAGTTTCTGATTTACCTTTGGATATTG ATGGTTACAAACTATCAAACGACGGTAAGCAAGTTGTACTCAGCATGCGCGTATTCCCAGAGTGTAAGGATTTAGCCTGC TCAAAGGATAAATTTACCGCTGAATCTGAGCGTAAATCGACTGGCCGCGAATACAAGCAGTTAATGGTTCGCCACTGGGA CACTTGGGAAGATCATGCCCGTAGCCACTTATTTGTTGGCGCAGTCAACGGTGAGAAACTGACTAAAGTCGTTGATGTCA CCCAAGGGTTAGACACTGAAACACCGCCAAAACCATTCTCGGGTATGGAAGAAGTGACCTTCACCCCAGACGGTAAATTC GTCGTTTATAGCGCTAAAGCGCCGAGCAAAGATCAAGCTTGGACCACTAACTATGATTTGTGGCAAGTGCCAGTCACGGG CGGCACTGCAACTAACTTAACCAAAGACAATCTCGCATGGGATGCACAGCCAACGTTTTCGAGCGATGGCCGTTATATGG CCTATTTAGCGATGAAGAAACCGGGTTTTGAAGCGGATCGTTACGGCATCATGCTGCGTGACACAACCACTGGCCAAACT AAAGAAGTGGCGCCATTGTGGGATCGTAGCCCAAGCTCACTGATGTTTGCCCCTGACAATCGTACCTTGTATGTCACGGC GCAAGACATAGGCCAAGTGTCTATTTTCCAAGTGAATACCCAATTTGGCGATGTGCGTTCTATCTACAGCGATGGCACAA ACAGCTTAATTGCGGTCACTAACGATGAACTGATTTTCGACAGCAAAACCTTAGTTGAGCCAGGCGATCTCTACAGTATC ACTACAGATGGCCAAGGGCTTAAGCGTCTGACCGAAGTGAATAAAGACAAGCTAGCCGAGATCAAGTTCGGTAAGTTTGA ACAGTTCAGCTTCAAGGGTTGGAATAACGAAGACGTCTACGGTTACTGGATCAAACCGGCTAATTTCCAAGAAGGTAAAA AATACCCGATTGCCTACTTAGTGCATGGTGGACCGCAGGGTTCATTTGGTAATGCCTTCAGCGGTCGATGGAACGCGCAG TTATGGGCGGGTGCAGGCTATGGCGTTGTCATGGTGGATTTCCACGGCTCAACCGGTTACGGTCAAGCCTTTACGGATTC TATCAGCCAAGATTGGGGCGGTAAGCCATTAGAAGATCTGCAAAAAGGCCTAGCGGCAGTGAGCCAACAACAAAAATGGC TCGATCCGCAAAACGCCTGTGCACTCGGTGGTTCTTACGGCGGCTACATGATGAACTGGATCCAAGGTAACTGGAACGAT GGTTTCAAGTGTCTTGTTGACCACGCTGGCCTGTTCGACATGCGTTCTATGTACCATGTGACCGAAGAATTATGGTTCCC AGAGTATGAATTTGGCGGCACTTACTCAGATAACAAAGCCTTATATGAGAAGTTTAACCCAGTGAATTATGTGGAAAACT GGAAAACGCCCATGTTGGTTATCCACGGCGAGAAAGACTTCCGTGTTCCTTATGATCAAGGTTTAGCGGCCTTTAGCTTT ATGCAGCGTAAAGGTATTCCATCTGAGTTGTTGATTTTCCCAGATGAAAACCACTGGATCCTAAAACCTGAAAACTTAGA GCAATGGTACGCCAATGTGTTAGGTTGGATGGATCGCTGGACTAAATAA
Upstream 100 bases:
>100_bases GATACGATCTCAGATCGTTTTTAACATTCGTGTTTGCAGCAATGATGATTATCGAATATTTGCAAGCCTCGAACCTGTTC AACAAAAGACGGACATAACA
Downstream 100 bases:
>100_bases CCTGAGCTCGGGATAAGCAGAGCCGCTGAGTAGGCATCTTTTCGGGCCTCTCTGCGTTGCTCTGTCTAACCATAGCTCGC TATGGCGTACGACAGAGCAC
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MKIAPLLLALGAAGLALSAQAADPTPFTVQQLIKLNKMHSATVSHDGTKLVYGLKTVNDKGEGSSDLYLLDLTDTKAKPL QLTSAAGTEHDVSFATDDKSIYFLAGRSGSSQLFQLPLTGGEAVQVSDLPLDIDGYKLSNDGKQVVLSMRVFPECKDLAC SKDKFTAESERKSTGREYKQLMVRHWDTWEDHARSHLFVGAVNGEKLTKVVDVTQGLDTETPPKPFSGMEEVTFTPDGKF VVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDGRYMAYLAMKKPGFEADRYGIMLRDTTTGQT KEVAPLWDRSPSSLMFAPDNRTLYVTAQDIGQVSIFQVNTQFGDVRSIYSDGTNSLIAVTNDELIFDSKTLVEPGDLYSI TTDGQGLKRLTEVNKDKLAEIKFGKFEQFSFKGWNNEDVYGYWIKPANFQEGKKYPIAYLVHGGPQGSFGNAFSGRWNAQ LWAGAGYGVVMVDFHGSTGYGQAFTDSISQDWGGKPLEDLQKGLAAVSQQQKWLDPQNACALGGSYGGYMMNWIQGNWND GFKCLVDHAGLFDMRSMYHVTEELWFPEYEFGGTYSDNKALYEKFNPVNYVENWKTPMLVIHGEKDFRVPYDQGLAAFSF MQRKGIPSELLIFPDENHWILKPENLEQWYANVLGWMDRWTK
Sequences:
>Translated_682_residues MKIAPLLLALGAAGLALSAQAADPTPFTVQQLIKLNKMHSATVSHDGTKLVYGLKTVNDKGEGSSDLYLLDLTDTKAKPL QLTSAAGTEHDVSFATDDKSIYFLAGRSGSSQLFQLPLTGGEAVQVSDLPLDIDGYKLSNDGKQVVLSMRVFPECKDLAC SKDKFTAESERKSTGREYKQLMVRHWDTWEDHARSHLFVGAVNGEKLTKVVDVTQGLDTETPPKPFSGMEEVTFTPDGKF VVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDGRYMAYLAMKKPGFEADRYGIMLRDTTTGQT KEVAPLWDRSPSSLMFAPDNRTLYVTAQDIGQVSIFQVNTQFGDVRSIYSDGTNSLIAVTNDELIFDSKTLVEPGDLYSI TTDGQGLKRLTEVNKDKLAEIKFGKFEQFSFKGWNNEDVYGYWIKPANFQEGKKYPIAYLVHGGPQGSFGNAFSGRWNAQ LWAGAGYGVVMVDFHGSTGYGQAFTDSISQDWGGKPLEDLQKGLAAVSQQQKWLDPQNACALGGSYGGYMMNWIQGNWND GFKCLVDHAGLFDMRSMYHVTEELWFPEYEFGGTYSDNKALYEKFNPVNYVENWKTPMLVIHGEKDFRVPYDQGLAAFSF MQRKGIPSELLIFPDENHWILKPENLEQWYANVLGWMDRWTK >Mature_682_residues MKIAPLLLALGAAGLALSAQAADPTPFTVQQLIKLNKMHSATVSHDGTKLVYGLKTVNDKGEGSSDLYLLDLTDTKAKPL QLTSAAGTEHDVSFATDDKSIYFLAGRSGSSQLFQLPLTGGEAVQVSDLPLDIDGYKLSNDGKQVVLSMRVFPECKDLAC SKDKFTAESERKSTGREYKQLMVRHWDTWEDHARSHLFVGAVNGEKLTKVVDVTQGLDTETPPKPFSGMEEVTFTPDGKF VVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDGRYMAYLAMKKPGFEADRYGIMLRDTTTGQT KEVAPLWDRSPSSLMFAPDNRTLYVTAQDIGQVSIFQVNTQFGDVRSIYSDGTNSLIAVTNDELIFDSKTLVEPGDLYSI TTDGQGLKRLTEVNKDKLAEIKFGKFEQFSFKGWNNEDVYGYWIKPANFQEGKKYPIAYLVHGGPQGSFGNAFSGRWNAQ LWAGAGYGVVMVDFHGSTGYGQAFTDSISQDWGGKPLEDLQKGLAAVSQQQKWLDPQNACALGGSYGGYMMNWIQGNWND GFKCLVDHAGLFDMRSMYHVTEELWFPEYEFGGTYSDNKALYEKFNPVNYVENWKTPMLVIHGEKDFRVPYDQGLAAFSF MQRKGIPSELLIFPDENHWILKPENLEQWYANVLGWMDRWTK
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=454, Percent_Identity=22.9074889867841, Blast_Score=112, Evalue=2e-24, Organism=Homo sapiens, GI18450280, Length=257, Percent_Identity=28.4046692607004, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI37577089, Length=257, Percent_Identity=28.4046692607004, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI194394146, Length=266, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=8e-17, Organism=Caenorhabditis elegans, GI25149159, Length=361, Percent_Identity=24.9307479224377, Blast_Score=102, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17552908, Length=204, Percent_Identity=26.4705882352941, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI25144537, Length=488, Percent_Identity=21.9262295081967, Blast_Score=87, Evalue=4e-17, Organism=Caenorhabditis elegans, GI25144540, Length=229, Percent_Identity=28.3842794759825, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17508017, Length=226, Percent_Identity=26.5486725663717, Blast_Score=69, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17508019, Length=226, Percent_Identity=26.5486725663717, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45551969, Length=249, Percent_Identity=26.1044176706827, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI45550825, Length=249, Percent_Identity=26.1044176706827, Blast_Score=80, Evalue=6e-15, Organism=Drosophila melanogaster, GI45553511, Length=249, Percent_Identity=26.1044176706827, Blast_Score=80, Evalue=6e-15, Organism=Drosophila melanogaster, GI24582032, Length=218, Percent_Identity=28.8990825688073, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 76077; Mature: 76077
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAPLLLALGAAGLALSAQAADPTPFTVQQLIKLNKMHSATVSHDGTKLVYGLKTVNDK CCHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEECCCCCEEEEEEEECCCC GEGSSDLYLLDLTDTKAKPLQLTSAAGTEHDVSFATDDKSIYFLAGRSGSSQLFQLPLTG CCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEECCCEEEEEECCCCCCEEEEEECCC GEAVQVSDLPLDIDGYKLSNDGKQVVLSMRVFPECKDLACSKDKFTAESERKSTGREYKQ CCEEEEECCEEECCCEEECCCCCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHH LMVRHWDTWEDHARSHLFVGAVNGEKLTKVVDVTQGLDTETPPKPFSGMEEVTFTPDGKF HHHHCCCCHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCE VVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDGRYMAYLAMKK EEEECCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECC PGFEADRYGIMLRDTTTGQTKEVAPLWDRSPSSLMFAPDNRTLYVTAQDIGQVSIFQVNT CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEEEC QFGDVRSIYSDGTNSLIAVTNDELIFDSKTLVEPGDLYSITTDGQGLKRLTEVNKDKLAE CCCHHHHHHCCCCCCEEEEECCCEEECCCCCCCCCCEEEEECCCHHHHHHHHCCHHHHHE IKFGKFEQFSFKGWNNEDVYGYWIKPANFQEGKKYPIAYLVHGGPQGSFGNAFSGRWNAQ EECCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCE LWAGAGYGVVMVDFHGSTGYGQAFTDSISQDWGGKPLEDLQKGLAAVSQQQKWLDPQNAC EEECCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHE ALGGSYGGYMMNWIQGNWNDGFKCLVDHAGLFDMRSMYHVTEELWFPEYEFGGTYSDNKA ECCCCCCCEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCHH LYEKFNPVNYVENWKTPMLVIHGEKDFRVPYDQGLAAFSFMQRKGIPSELLIFPDENHWI HHHHCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEE LKPENLEQWYANVLGWMDRWTK ECCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIAPLLLALGAAGLALSAQAADPTPFTVQQLIKLNKMHSATVSHDGTKLVYGLKTVNDK CCHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEECCCCCEEEEEEEECCCC GEGSSDLYLLDLTDTKAKPLQLTSAAGTEHDVSFATDDKSIYFLAGRSGSSQLFQLPLTG CCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEECCCEEEEEECCCCCCEEEEEECCC GEAVQVSDLPLDIDGYKLSNDGKQVVLSMRVFPECKDLACSKDKFTAESERKSTGREYKQ CCEEEEECCEEECCCEEECCCCCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHH LMVRHWDTWEDHARSHLFVGAVNGEKLTKVVDVTQGLDTETPPKPFSGMEEVTFTPDGKF HHHHCCCCHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCE VVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDGRYMAYLAMKK EEEECCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECC PGFEADRYGIMLRDTTTGQTKEVAPLWDRSPSSLMFAPDNRTLYVTAQDIGQVSIFQVNT CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEEEC QFGDVRSIYSDGTNSLIAVTNDELIFDSKTLVEPGDLYSITTDGQGLKRLTEVNKDKLAE CCCHHHHHHCCCCCCEEEEECCCEEECCCCCCCCCCEEEEECCCHHHHHHHHCCHHHHHE IKFGKFEQFSFKGWNNEDVYGYWIKPANFQEGKKYPIAYLVHGGPQGSFGNAFSGRWNAQ EECCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCE LWAGAGYGVVMVDFHGSTGYGQAFTDSISQDWGGKPLEDLQKGLAAVSQQQKWLDPQNAC EEECCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHE ALGGSYGGYMMNWIQGNWNDGFKCLVDHAGLFDMRSMYHVTEELWFPEYEFGGTYSDNKA ECCCCCCCEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCHH LYEKFNPVNYVENWKTPMLVIHGEKDFRVPYDQGLAAFSFMQRKGIPSELLIFPDENHWI HHHHCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEE LKPENLEQWYANVLGWMDRWTK ECCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]