Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is yuxL [H]

Identifier: 126174145

GI number: 126174145

Start: 2229887

End: 2231935

Strand: Direct

Name: yuxL [H]

Synonym: Sbal_1919

Alternate gene names: 126174145

Gene position: 2229887-2231935 (Clockwise)

Preceding gene: 126174144

Following gene: 126174146

Centisome position: 43.49

GC content: 47.63

Gene sequence:

>2049_bases
ATGAAAATAGCTCCTCTCCTATTGGCGCTCGGCGCCGCAGGCTTGGCGTTATCAGCCCAAGCGGCCGATCCAACGCCTTT
TACTGTGCAACAACTCATTAAACTCAATAAGATGCATTCTGCGACAGTGTCCCACGATGGCACTAAATTAGTTTATGGTC
TTAAAACGGTAAACGATAAGGGAGAGGGCAGTTCTGATCTGTATCTATTGGATCTGACTGACACGAAAGCGAAACCGTTA
CAACTGACCTCTGCTGCGGGCACTGAGCACGATGTGAGTTTCGCCACTGACGACAAGTCGATTTATTTCCTTGCCGGTCG
TAGCGGTTCAAGCCAGCTATTCCAACTGCCATTAACGGGCGGTGAAGCGGTTCAAGTTTCTGATTTACCTTTGGATATTG
ATGGTTACAAACTATCAAACGACGGTAAGCAAGTTGTACTCAGCATGCGCGTATTCCCAGAGTGTAAGGATTTAGCCTGC
TCAAAGGATAAATTTACCGCTGAATCTGAGCGTAAATCGACTGGCCGCGAATACAAGCAGTTAATGGTTCGCCACTGGGA
CACTTGGGAAGATCATGCCCGTAGCCACTTATTTGTTGGCGCAGTCAACGGTGAGAAACTGACTAAAGTCGTTGATGTCA
CCCAAGGGTTAGACACTGAAACACCGCCAAAACCATTCTCGGGTATGGAAGAAGTGACCTTCACCCCAGACGGTAAATTC
GTCGTTTATAGCGCTAAAGCGCCGAGCAAAGATCAAGCTTGGACCACTAACTATGATTTGTGGCAAGTGCCAGTCACGGG
CGGCACTGCAACTAACTTAACCAAAGACAATCTCGCATGGGATGCACAGCCAACGTTTTCGAGCGATGGCCGTTATATGG
CCTATTTAGCGATGAAGAAACCGGGTTTTGAAGCGGATCGTTACGGCATCATGCTGCGTGACACAACCACTGGCCAAACT
AAAGAAGTGGCGCCATTGTGGGATCGTAGCCCAAGCTCACTGATGTTTGCCCCTGACAATCGTACCTTGTATGTCACGGC
GCAAGACATAGGCCAAGTGTCTATTTTCCAAGTGAATACCCAATTTGGCGATGTGCGTTCTATCTACAGCGATGGCACAA
ACAGCTTAATTGCGGTCACTAACGATGAACTGATTTTCGACAGCAAAACCTTAGTTGAGCCAGGCGATCTCTACAGTATC
ACTACAGATGGCCAAGGGCTTAAGCGTCTGACCGAAGTGAATAAAGACAAGCTAGCCGAGATCAAGTTCGGTAAGTTTGA
ACAGTTCAGCTTCAAGGGTTGGAATAACGAAGACGTCTACGGTTACTGGATCAAACCGGCTAATTTCCAAGAAGGTAAAA
AATACCCGATTGCCTACTTAGTGCATGGTGGACCGCAGGGTTCATTTGGTAATGCCTTCAGCGGTCGATGGAACGCGCAG
TTATGGGCGGGTGCAGGCTATGGCGTTGTCATGGTGGATTTCCACGGCTCAACCGGTTACGGTCAAGCCTTTACGGATTC
TATCAGCCAAGATTGGGGCGGTAAGCCATTAGAAGATCTGCAAAAAGGCCTAGCGGCAGTGAGCCAACAACAAAAATGGC
TCGATCCGCAAAACGCCTGTGCACTCGGTGGTTCTTACGGCGGCTACATGATGAACTGGATCCAAGGTAACTGGAACGAT
GGTTTCAAGTGTCTTGTTGACCACGCTGGCCTGTTCGACATGCGTTCTATGTACCATGTGACCGAAGAATTATGGTTCCC
AGAGTATGAATTTGGCGGCACTTACTCAGATAACAAAGCCTTATATGAGAAGTTTAACCCAGTGAATTATGTGGAAAACT
GGAAAACGCCCATGTTGGTTATCCACGGCGAGAAAGACTTCCGTGTTCCTTATGATCAAGGTTTAGCGGCCTTTAGCTTT
ATGCAGCGTAAAGGTATTCCATCTGAGTTGTTGATTTTCCCAGATGAAAACCACTGGATCCTAAAACCTGAAAACTTAGA
GCAATGGTACGCCAATGTGTTAGGTTGGATGGATCGCTGGACTAAATAA

Upstream 100 bases:

>100_bases
GATACGATCTCAGATCGTTTTTAACATTCGTGTTTGCAGCAATGATGATTATCGAATATTTGCAAGCCTCGAACCTGTTC
AACAAAAGACGGACATAACA

Downstream 100 bases:

>100_bases
CCTGAGCTCGGGATAAGCAGAGCCGCTGAGTAGGCATCTTTTCGGGCCTCTCTGCGTTGCTCTGTCTAACCATAGCTCGC
TATGGCGTACGACAGAGCAC

Product: peptidase S9 prolyl oligopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MKIAPLLLALGAAGLALSAQAADPTPFTVQQLIKLNKMHSATVSHDGTKLVYGLKTVNDKGEGSSDLYLLDLTDTKAKPL
QLTSAAGTEHDVSFATDDKSIYFLAGRSGSSQLFQLPLTGGEAVQVSDLPLDIDGYKLSNDGKQVVLSMRVFPECKDLAC
SKDKFTAESERKSTGREYKQLMVRHWDTWEDHARSHLFVGAVNGEKLTKVVDVTQGLDTETPPKPFSGMEEVTFTPDGKF
VVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDGRYMAYLAMKKPGFEADRYGIMLRDTTTGQT
KEVAPLWDRSPSSLMFAPDNRTLYVTAQDIGQVSIFQVNTQFGDVRSIYSDGTNSLIAVTNDELIFDSKTLVEPGDLYSI
TTDGQGLKRLTEVNKDKLAEIKFGKFEQFSFKGWNNEDVYGYWIKPANFQEGKKYPIAYLVHGGPQGSFGNAFSGRWNAQ
LWAGAGYGVVMVDFHGSTGYGQAFTDSISQDWGGKPLEDLQKGLAAVSQQQKWLDPQNACALGGSYGGYMMNWIQGNWND
GFKCLVDHAGLFDMRSMYHVTEELWFPEYEFGGTYSDNKALYEKFNPVNYVENWKTPMLVIHGEKDFRVPYDQGLAAFSF
MQRKGIPSELLIFPDENHWILKPENLEQWYANVLGWMDRWTK

Sequences:

>Translated_682_residues
MKIAPLLLALGAAGLALSAQAADPTPFTVQQLIKLNKMHSATVSHDGTKLVYGLKTVNDKGEGSSDLYLLDLTDTKAKPL
QLTSAAGTEHDVSFATDDKSIYFLAGRSGSSQLFQLPLTGGEAVQVSDLPLDIDGYKLSNDGKQVVLSMRVFPECKDLAC
SKDKFTAESERKSTGREYKQLMVRHWDTWEDHARSHLFVGAVNGEKLTKVVDVTQGLDTETPPKPFSGMEEVTFTPDGKF
VVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDGRYMAYLAMKKPGFEADRYGIMLRDTTTGQT
KEVAPLWDRSPSSLMFAPDNRTLYVTAQDIGQVSIFQVNTQFGDVRSIYSDGTNSLIAVTNDELIFDSKTLVEPGDLYSI
TTDGQGLKRLTEVNKDKLAEIKFGKFEQFSFKGWNNEDVYGYWIKPANFQEGKKYPIAYLVHGGPQGSFGNAFSGRWNAQ
LWAGAGYGVVMVDFHGSTGYGQAFTDSISQDWGGKPLEDLQKGLAAVSQQQKWLDPQNACALGGSYGGYMMNWIQGNWND
GFKCLVDHAGLFDMRSMYHVTEELWFPEYEFGGTYSDNKALYEKFNPVNYVENWKTPMLVIHGEKDFRVPYDQGLAAFSF
MQRKGIPSELLIFPDENHWILKPENLEQWYANVLGWMDRWTK
>Mature_682_residues
MKIAPLLLALGAAGLALSAQAADPTPFTVQQLIKLNKMHSATVSHDGTKLVYGLKTVNDKGEGSSDLYLLDLTDTKAKPL
QLTSAAGTEHDVSFATDDKSIYFLAGRSGSSQLFQLPLTGGEAVQVSDLPLDIDGYKLSNDGKQVVLSMRVFPECKDLAC
SKDKFTAESERKSTGREYKQLMVRHWDTWEDHARSHLFVGAVNGEKLTKVVDVTQGLDTETPPKPFSGMEEVTFTPDGKF
VVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDGRYMAYLAMKKPGFEADRYGIMLRDTTTGQT
KEVAPLWDRSPSSLMFAPDNRTLYVTAQDIGQVSIFQVNTQFGDVRSIYSDGTNSLIAVTNDELIFDSKTLVEPGDLYSI
TTDGQGLKRLTEVNKDKLAEIKFGKFEQFSFKGWNNEDVYGYWIKPANFQEGKKYPIAYLVHGGPQGSFGNAFSGRWNAQ
LWAGAGYGVVMVDFHGSTGYGQAFTDSISQDWGGKPLEDLQKGLAAVSQQQKWLDPQNACALGGSYGGYMMNWIQGNWND
GFKCLVDHAGLFDMRSMYHVTEELWFPEYEFGGTYSDNKALYEKFNPVNYVENWKTPMLVIHGEKDFRVPYDQGLAAFSF
MQRKGIPSELLIFPDENHWILKPENLEQWYANVLGWMDRWTK

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI23510451, Length=454, Percent_Identity=22.9074889867841, Blast_Score=112, Evalue=2e-24,
Organism=Homo sapiens, GI18450280, Length=257, Percent_Identity=28.4046692607004, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI37577089, Length=257, Percent_Identity=28.4046692607004, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI194394146, Length=266, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI25149159, Length=361, Percent_Identity=24.9307479224377, Blast_Score=102, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17552908, Length=204, Percent_Identity=26.4705882352941, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25144537, Length=488, Percent_Identity=21.9262295081967, Blast_Score=87, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI25144540, Length=229, Percent_Identity=28.3842794759825, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17508017, Length=226, Percent_Identity=26.5486725663717, Blast_Score=69, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17508019, Length=226, Percent_Identity=26.5486725663717, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45551969, Length=249, Percent_Identity=26.1044176706827, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI45550825, Length=249, Percent_Identity=26.1044176706827, Blast_Score=80, Evalue=6e-15,
Organism=Drosophila melanogaster, GI45553511, Length=249, Percent_Identity=26.1044176706827, Blast_Score=80, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24582032, Length=218, Percent_Identity=28.8990825688073, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 76077; Mature: 76077

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAPLLLALGAAGLALSAQAADPTPFTVQQLIKLNKMHSATVSHDGTKLVYGLKTVNDK
CCHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEECCCCCEEEEEEEECCCC
GEGSSDLYLLDLTDTKAKPLQLTSAAGTEHDVSFATDDKSIYFLAGRSGSSQLFQLPLTG
CCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEECCCEEEEEECCCCCCEEEEEECCC
GEAVQVSDLPLDIDGYKLSNDGKQVVLSMRVFPECKDLACSKDKFTAESERKSTGREYKQ
CCEEEEECCEEECCCEEECCCCCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHH
LMVRHWDTWEDHARSHLFVGAVNGEKLTKVVDVTQGLDTETPPKPFSGMEEVTFTPDGKF
HHHHCCCCHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCE
VVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDGRYMAYLAMKK
EEEECCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECC
PGFEADRYGIMLRDTTTGQTKEVAPLWDRSPSSLMFAPDNRTLYVTAQDIGQVSIFQVNT
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEEEC
QFGDVRSIYSDGTNSLIAVTNDELIFDSKTLVEPGDLYSITTDGQGLKRLTEVNKDKLAE
CCCHHHHHHCCCCCCEEEEECCCEEECCCCCCCCCCEEEEECCCHHHHHHHHCCHHHHHE
IKFGKFEQFSFKGWNNEDVYGYWIKPANFQEGKKYPIAYLVHGGPQGSFGNAFSGRWNAQ
EECCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCE
LWAGAGYGVVMVDFHGSTGYGQAFTDSISQDWGGKPLEDLQKGLAAVSQQQKWLDPQNAC
EEECCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHE
ALGGSYGGYMMNWIQGNWNDGFKCLVDHAGLFDMRSMYHVTEELWFPEYEFGGTYSDNKA
ECCCCCCCEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCHH
LYEKFNPVNYVENWKTPMLVIHGEKDFRVPYDQGLAAFSFMQRKGIPSELLIFPDENHWI
HHHHCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEE
LKPENLEQWYANVLGWMDRWTK
ECCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIAPLLLALGAAGLALSAQAADPTPFTVQQLIKLNKMHSATVSHDGTKLVYGLKTVNDK
CCHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEECCCCCEEEEEEEECCCC
GEGSSDLYLLDLTDTKAKPLQLTSAAGTEHDVSFATDDKSIYFLAGRSGSSQLFQLPLTG
CCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEECCCEEEEEECCCCCCEEEEEECCC
GEAVQVSDLPLDIDGYKLSNDGKQVVLSMRVFPECKDLACSKDKFTAESERKSTGREYKQ
CCEEEEECCEEECCCEEECCCCCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHH
LMVRHWDTWEDHARSHLFVGAVNGEKLTKVVDVTQGLDTETPPKPFSGMEEVTFTPDGKF
HHHHCCCCHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCE
VVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDGRYMAYLAMKK
EEEECCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECC
PGFEADRYGIMLRDTTTGQTKEVAPLWDRSPSSLMFAPDNRTLYVTAQDIGQVSIFQVNT
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEEEC
QFGDVRSIYSDGTNSLIAVTNDELIFDSKTLVEPGDLYSITTDGQGLKRLTEVNKDKLAE
CCCHHHHHHCCCCCCEEEEECCCEEECCCCCCCCCCEEEEECCCHHHHHHHHCCHHHHHE
IKFGKFEQFSFKGWNNEDVYGYWIKPANFQEGKKYPIAYLVHGGPQGSFGNAFSGRWNAQ
EECCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCE
LWAGAGYGVVMVDFHGSTGYGQAFTDSISQDWGGKPLEDLQKGLAAVSQQQKWLDPQNAC
EEECCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHE
ALGGSYGGYMMNWIQGNWNDGFKCLVDHAGLFDMRSMYHVTEELWFPEYEFGGTYSDNKA
ECCCCCCCEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCHH
LYEKFNPVNYVENWKTPMLVIHGEKDFRVPYDQGLAAFSFMQRKGIPSELLIFPDENHWI
HHHHCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEE
LKPENLEQWYANVLGWMDRWTK
ECCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]