| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is napD [C]
Identifier: 126174135
GI number: 126174135
Start: 2219084
End: 2219341
Strand: Direct
Name: napD [C]
Synonym: Sbal_1909
Alternate gene names: 126174135
Gene position: 2219084-2219341 (Clockwise)
Preceding gene: 126174134
Following gene: 126174136
Centisome position: 43.28
GC content: 48.84
Gene sequence:
>258_bases ATGAGCAACGAACTCCATATCACCAGTTTAGTGGTGCAGGTCTTACCGCAGAAAATGGCAGACGTTAGACAAGAGATCAT GACCATTGAAAATGCCGAACTTTCCGTCAACAACGAAGTGAAGTTGGTCGTAGTCATCGAGGGCGAGACTCAGCGCGCCT TGATGGACAGTATAGAAGCGATCAATGCCATTCCGGGCGTGTTATCCGCCACTATGGTTTACCACCAGAGTGAAGTGCTC GAAGAGGGTGAAGAATGA
Upstream 100 bases:
>100_bases CTTGGGCTTTGCAATTTGGTTTAGTCAGATTTTGACTGGACCACCGGGAATGGGTTAATCGCTTTATTATCAGAATATTA AATAAAGAGTGGAATGTCGG
Downstream 100 bases:
>100_bases ATATGAACAGACGTGATTTTATTAAAGCCAATGCGGTGATTGCTGCCGCAGGGGCCGCAGGATTAGCTTTGCCCGCAGGC GCAAGCAACCTTATTACCAG
Product: NapD family protein
Products: reduced acceptor; NO3- [C]
Alternate protein names: NapD Protein; NapD Protein Subunit Of Nitrate Reductase
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSNELHITSLVVQVLPQKMADVRQEIMTIENAELSVNNEVKLVVVIEGETQRALMDSIEAINAIPGVLSATMVYHQSEVL EEGEE
Sequences:
>Translated_85_residues MSNELHITSLVVQVLPQKMADVRQEIMTIENAELSVNNEVKLVVVIEGETQRALMDSIEAINAIPGVLSATMVYHQSEVL EEGEE >Mature_84_residues SNELHITSLVVQVLPQKMADVRQEIMTIENAELSVNNEVKLVVVIEGETQRALMDSIEAINAIPGVLSATMVYHQSEVLE EGEE
Specific function: Plays A Role In The Correct Assembly Of Subunits Of The Periplasmic Napab Enzyme. [C]
COG id: COG3062
COG function: function code P; Uncharacterized protein involved in formation of periplasmic nitrate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9406; Mature: 9275
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNELHITSLVVQVLPQKMADVRQEIMTIENAELSVNNEVKLVVVIEGETQRALMDSIEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEECCCHHHHHHHHHHH INAIPGVLSATMVYHQSEVLEEGEE HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SNELHITSLVVQVLPQKMADVRQEIMTIENAELSVNNEVKLVVVIEGETQRALMDSIEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEECCCHHHHHHHHHHH INAIPGVLSATMVYHQSEVLEEGEE HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acceptor; nitrite [C]
Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA