| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174118
Identifier: 126174118
GI number: 126174118
Start: 2192339
End: 2193658
Strand: Direct
Name: 126174118
Synonym: Sbal_1892
Alternate gene names: NA
Gene position: 2192339-2193658 (Clockwise)
Preceding gene: 126174117
Following gene: 126174119
Centisome position: 42.76
GC content: 47.65
Gene sequence:
>1320_bases ATGACCCAAAAAAAGAATCAAATAAATGCAAGACAATCGAAACAGATTGCGGGTGCGTTAGCCTTAGCCAGTTGTGGATT GTTTGCCACAAGTGGCCACGCGACTGAATTATCTAAAAAAGCTGACGACTGGAAGGTCGATGCCGCTTTAATGTATTACG GTGAGCAGGATAGAGTGCAGGCCGTTGAAGCCATAGGTACAGCGCAAAAAGCCTTTGGCGATGATAGCGTGCTGGATCTC AAACTGGTGGTCGACAGCTTGACCGGTGCATCGGCTTCGGGCGCTGTGGCCCAAAGTACCAGCCAAACCTTTACTCGTCC TTCGGGCAATGGCCAATACAGTGTGGCAGCGGGCGATACACCGCTTGATGACACGTTCCACGATACCCGCGTTCAAGGCA GCGTTAACTGGGCCCAAGCGCTTAATTCAGACTGGAAAGTCAACGCTGGTGTCTATGGTTCAAAAGAATTCGATTATATG TCAATGGGGCTCAATGCCAGTATTGAGCGCGGTTTTAACAAAGACAACACTACGTTATTTTTAGGCACAGCTTACAGCTT CGATGTGGTCGATCCTGTCGGTGGACGTCCGGTGGATTTATCCTCCATGGCGGTTCGCGATAACTTCGCCAGTGAAGCCG CCTACCGCACCGCATTTGATGCGACTCGCCAAAGTGGCAGTGATAACAAGCAAACCGCCGATGTGATGTTAGGCATCACC CAAGTGCTCAGTCAGCGCTGGTTGTTGCAGGCCAATTACGGCTTATCGAGTGTCAATGGCTATTTAACCGATCCCTACAA AGTGCTCAGTGTGGTGGATAACAATGGCATCACTCAGGATCTCTTGTATGAAAGCCGCCCCGATGCTCGCTTGAAGCATA GCTTCTATGTGATGACTAAAGGCGCGTTGGATGCGGGCGTGGTGGATTTTTCCTATCGTTATAATACTGATGATTGGGAT CTCACATCGCATACCTTAGAAACCCATTACCGTTATTACTTTACGGGCAATTTTTACGGTCAATTGCATCTACGTTATTA CCAACAAACGGCTGCTAACTTCTATCAACCTTTCTTGATGGCAGATACACCATTGCCAGAGTTTGCCAGTGCCGATTATC GTATCGGTGATATGTCGGCTTATACGATAGGGATTAAATTTGGTCATCGATTATCGGGCGGTCATGAGATGTCGTATCGC TTAGAGTATTACCAACAGGATCCGAAAAATAACGGCACTACTATTCCAGGAGAGCTGCAAAACTTTGATCTGTTCCCGAC GCAGAAGGCAATAACAGCACAGTTTAGTTATTCTTTTTAA
Upstream 100 bases:
>100_bases TTAGATGTAACGAATAGATGTGATGAGCAGATGTAATAAAATCTGGGGCGAAATCCCGCGGTATTGAATAGATGAAAGTG ACCTACAGGTGTTGTCAGCT
Downstream 100 bases:
>100_bases TACGAAATAATGCTACTGACTCAGATAGCAAGGCGTTAAACTGTATGGGTAGCTTAGCTACCCATACTCAATTTACCCCT GAGCTTATTTAAGCTGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MTQKKNQINARQSKQIAGALALASCGLFATSGHATELSKKADDWKVDAALMYYGEQDRVQAVEAIGTAQKAFGDDSVLDL KLVVDSLTGASASGAVAQSTSQTFTRPSGNGQYSVAAGDTPLDDTFHDTRVQGSVNWAQALNSDWKVNAGVYGSKEFDYM SMGLNASIERGFNKDNTTLFLGTAYSFDVVDPVGGRPVDLSSMAVRDNFASEAAYRTAFDATRQSGSDNKQTADVMLGIT QVLSQRWLLQANYGLSSVNGYLTDPYKVLSVVDNNGITQDLLYESRPDARLKHSFYVMTKGALDAGVVDFSYRYNTDDWD LTSHTLETHYRYYFTGNFYGQLHLRYYQQTAANFYQPFLMADTPLPEFASADYRIGDMSAYTIGIKFGHRLSGGHEMSYR LEYYQQDPKNNGTTIPGELQNFDLFPTQKAITAQFSYSF
Sequences:
>Translated_439_residues MTQKKNQINARQSKQIAGALALASCGLFATSGHATELSKKADDWKVDAALMYYGEQDRVQAVEAIGTAQKAFGDDSVLDL KLVVDSLTGASASGAVAQSTSQTFTRPSGNGQYSVAAGDTPLDDTFHDTRVQGSVNWAQALNSDWKVNAGVYGSKEFDYM SMGLNASIERGFNKDNTTLFLGTAYSFDVVDPVGGRPVDLSSMAVRDNFASEAAYRTAFDATRQSGSDNKQTADVMLGIT QVLSQRWLLQANYGLSSVNGYLTDPYKVLSVVDNNGITQDLLYESRPDARLKHSFYVMTKGALDAGVVDFSYRYNTDDWD LTSHTLETHYRYYFTGNFYGQLHLRYYQQTAANFYQPFLMADTPLPEFASADYRIGDMSAYTIGIKFGHRLSGGHEMSYR LEYYQQDPKNNGTTIPGELQNFDLFPTQKAITAQFSYSF >Mature_438_residues TQKKNQINARQSKQIAGALALASCGLFATSGHATELSKKADDWKVDAALMYYGEQDRVQAVEAIGTAQKAFGDDSVLDLK LVVDSLTGASASGAVAQSTSQTFTRPSGNGQYSVAAGDTPLDDTFHDTRVQGSVNWAQALNSDWKVNAGVYGSKEFDYMS MGLNASIERGFNKDNTTLFLGTAYSFDVVDPVGGRPVDLSSMAVRDNFASEAAYRTAFDATRQSGSDNKQTADVMLGITQ VLSQRWLLQANYGLSSVNGYLTDPYKVLSVVDNNGITQDLLYESRPDARLKHSFYVMTKGALDAGVVDFSYRYNTDDWDL TSHTLETHYRYYFTGNFYGQLHLRYYQQTAANFYQPFLMADTPLPEFASADYRIGDMSAYTIGIKFGHRLSGGHEMSYRL EYYQQDPKNNGTTIPGELQNFDLFPTQKAITAQFSYSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48516; Mature: 48385
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKKNQINARQSKQIAGALALASCGLFATSGHATELSKKADDWKVDAALMYYGEQDRVQ CCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCCCEEEEEEEEECCHHHHH AVEAIGTAQKAFGDDSVLDLKLVVDSLTGASASGAVAQSTSQTFTRPSGNGQYSVAAGDT HHHHHHHHHHHCCCCCEEEEEEEEEHHCCCCCCCCCCCCCCHHCCCCCCCCEEEEECCCC PLDDTFHDTRVQGSVNWAQALNSDWKVNAGVYGSKEFDYMSMGLNASIERGFNKDNTTLF CCCCCCCCCEECCCCHHHHHCCCCCEEECCCCCCCCCCEEECCCCCHHHCCCCCCCCEEE LGTAYSFDVVDPVGGRPVDLSSMAVRDNFASEAAYRTAFDATRQSGSDNKQTADVMLGIT EEECEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH QVLSQRWLLQANYGLSSVNGYLTDPYKVLSVVDNNGITQDLLYESRPDARLKHSFYVMTK HHHHHHEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCEEEEEEEEC GALDAGVVDFSYRYNTDDWDLTSHTLETHYRYYFTGNFYGQLHLRYYQQTAANFYQPFLM CCCCCCEEEEEEEECCCCCCCCHHEEECEEEEEEEECEEEEEEEEEHHHHHHHHHCCEEE ADTPLPEFASADYRIGDMSAYTIGIKFGHRLSGGHEMSYRLEYYQQDPKNNGTTIPGELQ ECCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC NFDLFPTQKAITAQFSYSF CCCCCCCCCEEEEEEECCC >Mature Secondary Structure TQKKNQINARQSKQIAGALALASCGLFATSGHATELSKKADDWKVDAALMYYGEQDRVQ CCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCCCEEEEEEEEECCHHHHH AVEAIGTAQKAFGDDSVLDLKLVVDSLTGASASGAVAQSTSQTFTRPSGNGQYSVAAGDT HHHHHHHHHHHCCCCCEEEEEEEEEHHCCCCCCCCCCCCCCHHCCCCCCCCEEEEECCCC PLDDTFHDTRVQGSVNWAQALNSDWKVNAGVYGSKEFDYMSMGLNASIERGFNKDNTTLF CCCCCCCCCEECCCCHHHHHCCCCCEEECCCCCCCCCCEEECCCCCHHHCCCCCCCCEEE LGTAYSFDVVDPVGGRPVDLSSMAVRDNFASEAAYRTAFDATRQSGSDNKQTADVMLGIT EEECEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH QVLSQRWLLQANYGLSSVNGYLTDPYKVLSVVDNNGITQDLLYESRPDARLKHSFYVMTK HHHHHHEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCEEEEEEEEC GALDAGVVDFSYRYNTDDWDLTSHTLETHYRYYFTGNFYGQLHLRYYQQTAANFYQPFLM CCCCCCEEEEEEEECCCCCCCCHHEEECEEEEEEEECEEEEEEEEEHHHHHHHHHCCEEE ADTPLPEFASADYRIGDMSAYTIGIKFGHRLSGGHEMSYRLEYYQQDPKNNGTTIPGELQ ECCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC NFDLFPTQKAITAQFSYSF CCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA