| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174104
Identifier: 126174104
GI number: 126174104
Start: 2178298
End: 2178594
Strand: Direct
Name: 126174104
Synonym: Sbal_1878
Alternate gene names: NA
Gene position: 2178298-2178594 (Clockwise)
Preceding gene: 126174103
Following gene: 126174116
Centisome position: 42.48
GC content: 45.45
Gene sequence:
>297_bases ATGTCGGACTTTCCAGAACTGACAACCTGCGATTGTTCTATTTGTCGACGTAAAAACGCACTCATGGTTAAAGTTCACCA GAGTCAGTTCAAGCTGCTTGAGGGCGCTGATTCGCTGACGCGCTATCAATTTCATACTTGCACTGCACAGCATTATTTCT GCAATGTTTGTGGTATTTATCCCTTTCATCGAAAACGTGTTACACCTGATTTCTTCGGGATCAATGTATTCTGTCTGGAG GGATTTGAGCCATCAGATATCCCTGTTAGGGCGACAGTTGGCGCTGGCATGGCGTAA
Upstream 100 bases:
>100_bases TCGAGCTGGAAGGCGCCTGTGTTTTCTATTTGGAAGGTGAGGTGTTGATTTGAAAAGCTTTAATGGTTCTTGTCATTGTG GGGCGGTGCGTTTTGAGATT
Downstream 100 bases:
>100_bases GAAATCATGCGTCAGTTAGTCTGCATTAAGGTATGACACAGGATAGAGCGCTGCTTTGAGGCTGATGACATCACCATTTA GCCCTAAAGTGGAATGTGAA
Product: glutathione-dependent formaldehyde-activating, GFA
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Inner Membrane Protein; Gfa-Like Protein; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSDFPELTTCDCSICRRKNALMVKVHQSQFKLLEGADSLTRYQFHTCTAQHYFCNVCGIYPFHRKRVTPDFFGINVFCLE GFEPSDIPVRATVGAGMA
Sequences:
>Translated_98_residues MSDFPELTTCDCSICRRKNALMVKVHQSQFKLLEGADSLTRYQFHTCTAQHYFCNVCGIYPFHRKRVTPDFFGINVFCLE GFEPSDIPVRATVGAGMA >Mature_97_residues SDFPELTTCDCSICRRKNALMVKVHQSQFKLLEGADSLTRYQFHTCTAQHYFCNVCGIYPFHRKRVTPDFFGINVFCLEG FEPSDIPVRATVGAGMA
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=71, Percent_Identity=46.4788732394366, Blast_Score=69, Evalue=7e-13, Organism=Caenorhabditis elegans, GI25149380, Length=72, Percent_Identity=41.6666666666667, Blast_Score=68, Evalue=8e-13, Organism=Caenorhabditis elegans, GI25149382, Length=64, Percent_Identity=43.75, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11116; Mature: 10985
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 7.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFPELTTCDCSICRRKNALMVKVHQSQFKLLEGADSLTRYQFHTCTAQHYFCNVCGIY CCCCCCCCCCCHHHHCCCCEEEEEEECCHHHHHCCCCCHHEEEEEEECCCCEEEEECCCC PFHRKRVTPDFFGINVFCLEGFEPSDIPVRATVGAGMA CCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCC >Mature Secondary Structure SDFPELTTCDCSICRRKNALMVKVHQSQFKLLEGADSLTRYQFHTCTAQHYFCNVCGIY CCCCCCCCCCHHHHCCCCEEEEEEECCHHHHHCCCCCHHEEEEEEECCCCEEEEECCCC PFHRKRVTPDFFGINVFCLEGFEPSDIPVRATVGAGMA CCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA