| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is ycgL [C]
Identifier: 126174095
GI number: 126174095
Start: 2168271
End: 2168588
Strand: Direct
Name: ycgL [C]
Synonym: Sbal_1869
Alternate gene names: 126174095
Gene position: 2168271-2168588 (Clockwise)
Preceding gene: 126174091
Following gene: 126174096
Centisome position: 42.29
GC content: 39.94
Gene sequence:
>318_bases TTGACTGGCAAGTTTGAACTATTGGATATTTGTACTCTTATGCTATGTGCCGTTTATAAAAGTAGCCGAAAGGCTGATAC TTATTTATTTGTGAAGAAAAGAGATTGTTTTGATGATGTTCCTGCGCCTTTGATGGAAATGTTCGGCGTGCCAAAGCTGG TGATGGTGTTTCCTATTGCGAAACGTGATGCGTTAGGCATGGCAGATATTCAAAAGGTGAGAGCTGCGATGGAAGAAAAC GGCTTTTATTTACAAATTCCACCTCCTCAGGTGAATTTATTGGCAGAGCATAAACTCAGTCTTGGGATCAAAGATTAA
Upstream 100 bases:
>100_bases AGCTAGGTTTTGACATCCCGGCACTATTCTCCAGAAATCATCAGTCGGTTCGCTGATTTTACAATTAAATTACTAGGCGA CCATGTTATAGTGTGCCCCA
Downstream 100 bases:
>100_bases GCCAATAGCATAAAAATAACAGGAAGGTATATGCATCGATACCGTACTTATCTAACCCAAGCTAATCAAACCAATGCTTT CCCAGTTAAGGTTTGTCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MTGKFELLDICTLMLCAVYKSSRKADTYLFVKKRDCFDDVPAPLMEMFGVPKLVMVFPIAKRDALGMADIQKVRAAMEEN GFYLQIPPPQVNLLAEHKLSLGIKD
Sequences:
>Translated_105_residues MTGKFELLDICTLMLCAVYKSSRKADTYLFVKKRDCFDDVPAPLMEMFGVPKLVMVFPIAKRDALGMADIQKVRAAMEEN GFYLQIPPPQVNLLAEHKLSLGIKD >Mature_104_residues TGKFELLDICTLMLCAVYKSSRKADTYLFVKKRDCFDDVPAPLMEMFGVPKLVMVFPIAKRDALGMADIQKVRAAMEENG FYLQIPPPQVNLLAEHKLSLGIKD
Specific function: Unknown
COG id: COG3100
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0745 family [H]
Homologues:
Organism=Escherichia coli, GI308199518, Length=91, Percent_Identity=47.2527472527472, Blast_Score=95, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007840 - ProDom: PD030374 [H]
Pfam domain/function: PF05166 YcgL [H]
EC number: NA
Molecular weight: Translated: 11840; Mature: 11709
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGKFELLDICTLMLCAVYKSSRKADTYLFVKKRDCFDDVPAPLMEMFGVPKLVMVFPIA CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCHHHCCCC KRDALGMADIQKVRAAMEENGFYLQIPPPQVNLLAEHKLSLGIKD CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHHCCCCCCC >Mature Secondary Structure TGKFELLDICTLMLCAVYKSSRKADTYLFVKKRDCFDDVPAPLMEMFGVPKLVMVFPIA CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCHHHCCCC KRDALGMADIQKVRAAMEENGFYLQIPPPQVNLLAEHKLSLGIKD CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA