| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174043
Identifier: 126174043
GI number: 126174043
Start: 2107692
End: 2108855
Strand: Direct
Name: 126174043
Synonym: Sbal_1816
Alternate gene names: NA
Gene position: 2107692-2108855 (Clockwise)
Preceding gene: 126174041
Following gene: 126174044
Centisome position: 41.11
GC content: 47.08
Gene sequence:
>1164_bases TTGAGCCAGATCAAATCTCAAGTGTGTGGCTGGGTTGAACAGGGACATGTCACGCAAGAGCAAGCGAATACGCTTTATCG GCAGGTCACAGTGTTGCCAGATGCGTCGAGCTGGCGTGGCTTAATCGCTAACTTATTACTCTGGTTTGGGGCCTTGAGCT TTGCCTCTGGGGTAATTTTTTTCTTTGCCTACAATTGGCAATCCCTCGGGCGTTTTGCCAAATTTGGCCTTATTGAAGTG GCGATAGTGCTCGCCATCGGCGCATTTGCTTGGCTCTATTATCGTGCTAATTCCCTTTCAGCTGCTTCCCATAGTCATAG TCATAGTAACCAAAGCAACGACAGTAGATTTGGTGGGACGACAGCCAATGGTGTGTTATTGGCCGCGAGCGTATTGGTGG GCGGCTTATTAGCACTGGTTGGGCAAACCTATCAAACGGGCGCCGATCCTTGGCAGTTATTCGCCCTGTGGGCGTTAGTT ATTTTGCCTTTTGCTTGGGTGGCGGGATTCGATGGTTTATGGCTGCTGCTGGTGGGGCTTATTAACCTAAGCATAGGGAT ATTTTTAGATTCCTTTTCCCATTTATGGGGAGCCTTCTTGGATGAACAAGGCCAACTGCTGATCTTTATCTGTTTGAATT TAGCTATCTATTACGCTTTTGTATTGTTAGACCGCAACGTCGCGGGGCGCTGGCATGCGCCAATCCTCGAATATGCGTGT TCACTGTTTGCGATGGGCTGTTTTACTTGGTTAATCACTTGGCTGATTTTCGATGATTTCTTTAAAGGTGATGGCTTTAG CACTGGTGTCATCAGTGGTTATCTTGCCCATCTGGTGTTGGGATTCGTTATTTTTCGCTATCGATTACCGCGCATTTATC CCTTAGCCTTGGGCGGTTTTAGCTTGATTGCCGTGGGCGCTGCGTTACTGATACGGTTGATGTTTGAGGACAATGATCCC ATAGGTGGTTTTTTGTTTATTGGGCTTTACATCATTTTGGCGAGCACAGGCTTGAGTATTTGGTTAAAGGAACTGAGTCG CAAGCTAAAACCACTGTCACAGTCTATGTCAGAATTAGAACCTGAACCTATGTCTGAATTAGAGCCTGATCCAGCAGCGA GAGCGACCCAAGGGAAAGTGGGAGACATTCATGAGCAACAATAA
Upstream 100 bases:
>100_bases ACAAGTATACACAATTTAATTTACTCAACGCTGTCGATATTGTGCGAATTTTGAATAGGTCATAGTAAGCTAGCGCAAAC AGGATGAGGGAGAACTCACA
Downstream 100 bases:
>100_bases TGGCTTACCGGATGGAGACATGATGACCAATCCTTTAACGGGTTCAGTAGCGACTCCTTTAAAGTCTCCTTCAAAAGAGA ATGCCGCTTTAATTGATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MSQIKSQVCGWVEQGHVTQEQANTLYRQVTVLPDASSWRGLIANLLLWFGALSFASGVIFFFAYNWQSLGRFAKFGLIEV AIVLAIGAFAWLYYRANSLSAASHSHSHSNQSNDSRFGGTTANGVLLAASVLVGGLLALVGQTYQTGADPWQLFALWALV ILPFAWVAGFDGLWLLLVGLINLSIGIFLDSFSHLWGAFLDEQGQLLIFICLNLAIYYAFVLLDRNVAGRWHAPILEYAC SLFAMGCFTWLITWLIFDDFFKGDGFSTGVISGYLAHLVLGFVIFRYRLPRIYPLALGGFSLIAVGAALLIRLMFEDNDP IGGFLFIGLYIILASTGLSIWLKELSRKLKPLSQSMSELEPEPMSELEPDPAARATQGKVGDIHEQQ
Sequences:
>Translated_387_residues MSQIKSQVCGWVEQGHVTQEQANTLYRQVTVLPDASSWRGLIANLLLWFGALSFASGVIFFFAYNWQSLGRFAKFGLIEV AIVLAIGAFAWLYYRANSLSAASHSHSHSNQSNDSRFGGTTANGVLLAASVLVGGLLALVGQTYQTGADPWQLFALWALV ILPFAWVAGFDGLWLLLVGLINLSIGIFLDSFSHLWGAFLDEQGQLLIFICLNLAIYYAFVLLDRNVAGRWHAPILEYAC SLFAMGCFTWLITWLIFDDFFKGDGFSTGVISGYLAHLVLGFVIFRYRLPRIYPLALGGFSLIAVGAALLIRLMFEDNDP IGGFLFIGLYIILASTGLSIWLKELSRKLKPLSQSMSELEPEPMSELEPDPAARATQGKVGDIHEQQ >Mature_386_residues SQIKSQVCGWVEQGHVTQEQANTLYRQVTVLPDASSWRGLIANLLLWFGALSFASGVIFFFAYNWQSLGRFAKFGLIEVA IVLAIGAFAWLYYRANSLSAASHSHSHSNQSNDSRFGGTTANGVLLAASVLVGGLLALVGQTYQTGADPWQLFALWALVI LPFAWVAGFDGLWLLLVGLINLSIGIFLDSFSHLWGAFLDEQGQLLIFICLNLAIYYAFVLLDRNVAGRWHAPILEYACS LFAMGCFTWLITWLIFDDFFKGDGFSTGVISGYLAHLVLGFVIFRYRLPRIYPLALGGFSLIAVGAALLIRLMFEDNDPI GGFLFIGLYIILASTGLSIWLKELSRKLKPLSQSMSELEPEPMSELEPDPAARATQGKVGDIHEQQ
Specific function: Unknown
COG id: COG4984
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42681; Mature: 42550
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIKSQVCGWVEQGHVTQEQANTLYRQVTVLPDASSWRGLIANLLLWFGALSFASGVIF CCHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH FFAYNWQSLGRFAKFGLIEVAIVLAIGAFAWLYYRANSLSAASHSHSHSNQSNDSRFGGT HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCC TANGVLLAASVLVGGLLALVGQTYQTGADPWQLFALWALVILPFAWVAGFDGLWLLLVGL CCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH INLSIGIFLDSFSHLWGAFLDEQGQLLIFICLNLAIYYAFVLLDRNVAGRWHAPILEYAC HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH SLFAMGCFTWLITWLIFDDFFKGDGFSTGVISGYLAHLVLGFVIFRYRLPRIYPLALGGF HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHH SLIAVGAALLIRLMFEDNDPIGGFLFIGLYIILASTGLSIWLKELSRKLKPLSQSMSELE HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC PEPMSELEPDPAARATQGKVGDIHEQQ CCCHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SQIKSQVCGWVEQGHVTQEQANTLYRQVTVLPDASSWRGLIANLLLWFGALSFASGVIF CHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH FFAYNWQSLGRFAKFGLIEVAIVLAIGAFAWLYYRANSLSAASHSHSHSNQSNDSRFGGT HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCC TANGVLLAASVLVGGLLALVGQTYQTGADPWQLFALWALVILPFAWVAGFDGLWLLLVGL CCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH INLSIGIFLDSFSHLWGAFLDEQGQLLIFICLNLAIYYAFVLLDRNVAGRWHAPILEYAC HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH SLFAMGCFTWLITWLIFDDFFKGDGFSTGVISGYLAHLVLGFVIFRYRLPRIYPLALGGF HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHH SLIAVGAALLIRLMFEDNDPIGGFLFIGLYIILASTGLSIWLKELSRKLKPLSQSMSELE HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC PEPMSELEPDPAARATQGKVGDIHEQQ CCCHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA