| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173996
Identifier: 126173996
GI number: 126173996
Start: 2060380
End: 2061321
Strand: Direct
Name: 126173996
Synonym: Sbal_1769
Alternate gene names: NA
Gene position: 2060380-2061321 (Clockwise)
Preceding gene: 126173995
Following gene: 126173997
Centisome position: 40.18
GC content: 47.35
Gene sequence:
>942_bases ATGTTTTTTGAAGGCTCAGAAAAGAAACTTGAGATCATCGTGGCGGCGTCTGCGCCGAATTTACGCGAACTCGATGTGAG CTTTTGGTCAGCCTTAGTCAATTGTGCCCATGCCGAGATTTTGTCGCAGTTAAGTAATGCTGATTGCGATGCCTACCTGT TGAGCGAATCCAGCTTATTCGTATGGCACGACAGATTTGTCATGCTCACCTGCGGCAATAGCACTTTAGTGGATGCCGCT TGTTATTTTATCGATGCGCTTGGCGTATCTGCGATGGCGCTGGTGAGTTATCAGCGTAAAAACGAATACCAAGCCCACCT ACAAGCCAGCAGTTTTGCCGATGATGTTGGCAAGTTGCGTCAGCGTATCGCGGGTAAGGCAATGAGAGTGGGGCATTTAG ACAGTCACCATCATTATTTTTTCTGCTCTGACAGCGATTATCGAGCACCAAAGGATGATCAAACCTGTGAGCTGCTGATG TACCACATTCGTGGTGAATTGGCCGACTATCTTAATGGTGGCTCGCAAAGCAAAGATGAAATTTGCGCCGCACTCGAACT TAACGATTTACTCCCCGAATTTGAGATTGACGCCCATTTATTTGACCCCTCAGGTTTTTCGATGAATGGCCTCTGGGGCA AATATTATGTCACCTTGCATATCACGCCCCAAAGCGAGAATGCCTGCGCCAGTTCCTATGTGAGCTTTGAAACGAATCTT GATTTAGCCCAGTATCCGCAAGATCTCTTGGGGCGACTATTAGCGCTGTTTTCTCCCGTCAGTTGGGACACCATCCGCTT TAATACTGACGACTTAACGCAGGGATTTCCTGCCCATTTATGCTTAGGGCGTGGCTCATTAACGACCGAGCAAGGTTATG ACATTAGTTTTAGTCACTATCAGCAGCTTGAGGCTGAAGTGCTGATCCCTGAATTCATGTAA
Upstream 100 bases:
>100_bases TGCTTTCTGGACGATAAATATTTATTGTTTGTGGGAGTCAAACCGGTGTAAAGAATGTCAACAGCAAGGGCGCATAGCAT TTAATGGGGTTAAGGATTTG
Downstream 100 bases:
>100_bases TTTTTTGGCATTTGTTTAAGGAAACCCCATGACAGATCTGAGTGATATCCGCCGCGAGTATGCTAAAGGCGGCTTAAGAC GTGCCGACTTACCGCAAAAC
Product: adenosylmethionine decarboxylase
Products: NA
Alternate protein names: S-Adenosylmethionine Decarboxylase; S-Adenosylmethionine Decarboxylase Pro
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MFFEGSEKKLEIIVAASAPNLRELDVSFWSALVNCAHAEILSQLSNADCDAYLLSESSLFVWHDRFVMLTCGNSTLVDAA CYFIDALGVSAMALVSYQRKNEYQAHLQASSFADDVGKLRQRIAGKAMRVGHLDSHHHYFFCSDSDYRAPKDDQTCELLM YHIRGELADYLNGGSQSKDEICAALELNDLLPEFEIDAHLFDPSGFSMNGLWGKYYVTLHITPQSENACASSYVSFETNL DLAQYPQDLLGRLLALFSPVSWDTIRFNTDDLTQGFPAHLCLGRGSLTTEQGYDISFSHYQQLEAEVLIPEFM
Sequences:
>Translated_313_residues MFFEGSEKKLEIIVAASAPNLRELDVSFWSALVNCAHAEILSQLSNADCDAYLLSESSLFVWHDRFVMLTCGNSTLVDAA CYFIDALGVSAMALVSYQRKNEYQAHLQASSFADDVGKLRQRIAGKAMRVGHLDSHHHYFFCSDSDYRAPKDDQTCELLM YHIRGELADYLNGGSQSKDEICAALELNDLLPEFEIDAHLFDPSGFSMNGLWGKYYVTLHITPQSENACASSYVSFETNL DLAQYPQDLLGRLLALFSPVSWDTIRFNTDDLTQGFPAHLCLGRGSLTTEQGYDISFSHYQQLEAEVLIPEFM >Mature_313_residues MFFEGSEKKLEIIVAASAPNLRELDVSFWSALVNCAHAEILSQLSNADCDAYLLSESSLFVWHDRFVMLTCGNSTLVDAA CYFIDALGVSAMALVSYQRKNEYQAHLQASSFADDVGKLRQRIAGKAMRVGHLDSHHHYFFCSDSDYRAPKDDQTCELLM YHIRGELADYLNGGSQSKDEICAALELNDLLPEFEIDAHLFDPSGFSMNGLWGKYYVTLHITPQSENACASSYVSFETNL DLAQYPQDLLGRLLALFSPVSWDTIRFNTDDLTQGFPAHLCLGRGSLTTEQGYDISFSHYQQLEAEVLIPEFM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74275346, Length=287, Percent_Identity=33.4494773519164, Blast_Score=118, Evalue=8e-27, Organism=Homo sapiens, GI74275348, Length=144, Percent_Identity=36.8055555555556, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17508719, Length=328, Percent_Identity=29.8780487804878, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24583360, Length=283, Percent_Identity=31.4487632508834, Blast_Score=113, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35099; Mature: 35099
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS01336 ADOMETDC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFEGSEKKLEIIVAASAPNLRELDVSFWSALVNCAHAEILSQLSNADCDAYLLSESSLF CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE VWHDRFVMLTCGNSTLVDAACYFIDALGVSAMALVSYQRKNEYQAHLQASSFADDVGKLR EEECEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QRIAGKAMRVGHLDSHHHYFFCSDSDYRAPKDDQTCELLMYHIRGELADYLNGGSQSKDE HHHHCCCEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH ICAALELNDLLPEFEIDAHLFDPSGFSMNGLWGKYYVTLHITPQSENACASSYVSFETNL HHHHHHHHHCCCCCCCCEEEECCCCCEECCCCEEEEEEEEEECCCCCCHHHHEEEEECCC DLAQYPQDLLGRLLALFSPVSWDTIRFNTDDLTQGFPAHLCLGRGSLTTEQGYDISFSHY CHHHCCHHHHHHHHHHHCCCCCCEEEECCHHHCCCCCCEEEECCCCCCCCCCCCCCHHHH QQLEAEVLIPEFM HHHHHEEECCCCC >Mature Secondary Structure MFFEGSEKKLEIIVAASAPNLRELDVSFWSALVNCAHAEILSQLSNADCDAYLLSESSLF CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE VWHDRFVMLTCGNSTLVDAACYFIDALGVSAMALVSYQRKNEYQAHLQASSFADDVGKLR EEECEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QRIAGKAMRVGHLDSHHHYFFCSDSDYRAPKDDQTCELLMYHIRGELADYLNGGSQSKDE HHHHCCCEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH ICAALELNDLLPEFEIDAHLFDPSGFSMNGLWGKYYVTLHITPQSENACASSYVSFETNL HHHHHHHHHCCCCCCCCEEEECCCCCEECCCCEEEEEEEEEECCCCCCHHHHEEEEECCC DLAQYPQDLLGRLLALFSPVSWDTIRFNTDDLTQGFPAHLCLGRGSLTTEQGYDISFSHY CHHHCCHHHHHHHHHHHCCCCCCEEEECCHHHCCCCCCEEEECCCCCCCCCCCCCCHHHH QQLEAEVLIPEFM HHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA