Click here to switch to the map view.

The map label for this gene is bioC [H]

Identifier: 126173987

GI number: 126173987

Start: 2050734

End: 2051696

Strand: Direct

Name: bioC [H]

Synonym: Sbal_1760

Alternate gene names: 126173987

Gene position: 2050734-2051696 (Clockwise)

Preceding gene: 126173986

Following gene: 126173988

Centisome position: 40.0

GC content: 47.66

Gene sequence:

>963_bases
ATGCAAGCTTTTGAAAAAAAAGCGATTGAAAAACAAGCTATTGGAAAAAGAGCAATTGACAAAGAATCCTATGTTCACGG
CGCTCAGATTGCTGAACGATTCTCAGCGGCGGCCCATAGTTACCAAGACCATAATCAGTTACAGCGTCTGAGCGCCGCCA
GTTTACTCAGTGAGTTTACCGCCAAAGGTCATCTGCTGGATATTGGCGCAGGCCCTGGGACAGATTTTTCGGCGTATCAC
TATGCGCATCAATCTGAACATAACTCTGAGCATGGTTCGATACAAAATCCACCGACAACTGTGTTTGCCGTGGATATCGC
CCTTGGTATGTTACATAAGCTAAAACAAACTTATCCCGATTATCACGGCGTTTGTGCCGATGCCGAGTGCTTACCCTTTG
TCGATGGTTGTATCGATGTAATTTATTCGAATCTGGCTTTGCAATGGTGTGCGGATTTTCCCGCTGCGGTAGCTGAAATG
GCAAGGGTACTAAAGCCGAATGGCGAGTGTCATTTGAGCTTAGTGGCGCAGGGGAGTCTGAATCAATTGGCCGAATTAGG
CTTAAGAGTAAATGACTTTTCGACGCTGGAGGCGCTAAAAGCGGCATTTAAACTCGATACATGGCAGTTCTTAGAGGTGC
AACTCATTCCTATGACAGTGTATTTTGATACTCTCAAAGCATTGCTCTATTCCATCAAAGGGGTGGGCGCCTCGGTGAAA
TCGGCCAGTGCAACCCATTCAGCTAGTTCAATCAGTTTAGCCAATTCAATCAGTTTAGATAGTTCAACGATTCAGTCAGC
AGGAGAGGTTGCCGGCGCAATAGCCGCTTCAGAACCTGCTCTGCGATTGCGTGGTCGCCAAGATTGGCAGGCAATGCAGG
CCAAAGCCGAATCCTTACGTGTGCCGCAAGGTTTGCCGTTAACCTACCAGATAGTGCAGATACGTGCTCGGCGCGGGATG
TAA

Upstream 100 bases:

>100_bases
GCTCCAGTCTAGTGAGCCCAAGTCGAGTGAGTCCAAATCGAGTGAGTCCAACTCTTGCGGGTCAACATTTCACGAGTTGA
ATGTGGGCGAATCTGCTGTA

Downstream 100 bases:

>100_bases
CAGTTTCACACTATGTTTTAGCTACAACAATATTCATGCACACATACTTAGCATTGATTAGCGATAGGGACTTTGATTTG
TGGACTTGTGGATTTAAAGG

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MQAFEKKAIEKQAIGKRAIDKESYVHGAQIAERFSAAAHSYQDHNQLQRLSAASLLSEFTAKGHLLDIGAGPGTDFSAYH
YAHQSEHNSEHGSIQNPPTTVFAVDIALGMLHKLKQTYPDYHGVCADAECLPFVDGCIDVIYSNLALQWCADFPAAVAEM
ARVLKPNGECHLSLVAQGSLNQLAELGLRVNDFSTLEALKAAFKLDTWQFLEVQLIPMTVYFDTLKALLYSIKGVGASVK
SASATHSASSISLANSISLDSSTIQSAGEVAGAIAASEPALRLRGRQDWQAMQAKAESLRVPQGLPLTYQIVQIRARRGM

Sequences:

>Translated_320_residues
MQAFEKKAIEKQAIGKRAIDKESYVHGAQIAERFSAAAHSYQDHNQLQRLSAASLLSEFTAKGHLLDIGAGPGTDFSAYH
YAHQSEHNSEHGSIQNPPTTVFAVDIALGMLHKLKQTYPDYHGVCADAECLPFVDGCIDVIYSNLALQWCADFPAAVAEM
ARVLKPNGECHLSLVAQGSLNQLAELGLRVNDFSTLEALKAAFKLDTWQFLEVQLIPMTVYFDTLKALLYSIKGVGASVK
SASATHSASSISLANSISLDSSTIQSAGEVAGAIAASEPALRLRGRQDWQAMQAKAESLRVPQGLPLTYQIVQIRARRGM
>Mature_320_residues
MQAFEKKAIEKQAIGKRAIDKESYVHGAQIAERFSAAAHSYQDHNQLQRLSAASLLSEFTAKGHLLDIGAGPGTDFSAYH
YAHQSEHNSEHGSIQNPPTTVFAVDIALGMLHKLKQTYPDYHGVCADAECLPFVDGCIDVIYSNLALQWCADFPAAVAEM
ARVLKPNGECHLSLVAQGSLNQLAELGLRVNDFSTLEALKAAFKLDTWQFLEVQLIPMTVYFDTLKALLYSIKGVGASVK
SASATHSASSISLANSISLDSSTIQSAGEVAGAIAASEPALRLRGRQDWQAMQAKAESLRVPQGLPLTYQIVQIRARRGM

Specific function: BioC is involved in an early, but chemically unexplored, step in the conversion of pimelic acid to biotin [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786994, Length=206, Percent_Identity=29.6116504854369, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011814
- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 34643; Mature: 34643

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAFEKKAIEKQAIGKRAIDKESYVHGAQIAERFSAAAHSYQDHNQLQRLSAASLLSEFT
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKGHLLDIGAGPGTDFSAYHYAHQSEHNSEHGSIQNPPTTVFAVDIALGMLHKLKQTYPD
CCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC
YHGVCADAECLPFVDGCIDVIYSNLALQWCADFPAAVAEMARVLKPNGECHLSLVAQGSL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCH
NQLAELGLRVNDFSTLEALKAAFKLDTWQFLEVQLIPMTVYFDTLKALLYSIKGVGASVK
HHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCHH
SASATHSASSISLANSISLDSSTIQSAGEVAGAIAASEPALRLRGRQDWQAMQAKAESLR
HCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCC
VPQGLPLTYQIVQIRARRGM
CCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQAFEKKAIEKQAIGKRAIDKESYVHGAQIAERFSAAAHSYQDHNQLQRLSAASLLSEFT
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKGHLLDIGAGPGTDFSAYHYAHQSEHNSEHGSIQNPPTTVFAVDIALGMLHKLKQTYPD
CCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC
YHGVCADAECLPFVDGCIDVIYSNLALQWCADFPAAVAEMARVLKPNGECHLSLVAQGSL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCH
NQLAELGLRVNDFSTLEALKAAFKLDTWQFLEVQLIPMTVYFDTLKALLYSIKGVGASVK
HHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCHH
SASATHSASSISLANSISLDSSTIQSAGEVAGAIAASEPALRLRGRQDWQAMQAKAESLR
HCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCC
VPQGLPLTYQIVQIRARRGM
CCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9063571 [H]