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The map label for this gene is tdhA [H]

Identifier: 126173635

GI number: 126173635

Start: 1606386

End: 1608605

Strand: Direct

Name: tdhA [H]

Synonym: Sbal_1397

Alternate gene names: 126173635

Gene position: 1606386-1608605 (Clockwise)

Preceding gene: 126173633

Following gene: 126173636

Centisome position: 31.33

GC content: 49.23

Gene sequence:

>2220_bases
ATGGGTTGCCTACCTAAATTTGGGAAATGGAAAGCGAATAGAAATCTGTCGCTGATGGGATTATGTTTGTTGCCCTCAAT
GCCGTTGTACGCAAATGAGGTATTGGGCGAGCCTAAGGTTGAGCCGATTGAAATCCTTCAGGTTCATGGGCAGCAATATC
GTAGGGCCATCACAGTCGCTAAACCCGGTGAAGCGATTATTTCCATGGAACAAATCGAGGAGATGCAGGCGACGACCTTC
GCCGAAGTGATTGATGATATGGCGGGGGCGCATATCGATGGCGGCACCCGCAGCGGCGGTGAGCGGATTAATATTTGGGG
CTTTGGCGAGACCGAAGATTTTAACGTTTATGTGGATAATGCTCCGGTGGGATTTGAGCAGTATCGCTATGGCTCATTTT
TCCTCGATCCTGATCTCATCAAACGAGTGGAAGTGATCAAAGGTGCCCATGATGTGCGCTCGGGCAATGGCGGTTTTGGT
GGGGCCATGTATGTGGTCACTAAATCGGCCGATGATTTTCTTAAATACGATCAAGCGATTGGCGCGCGAGTTAAAACCAG
CTACGCCAGTAATAATGACGCGGCGGGTTATACGGGAACTGTCTATGGCCGGGTGAATCCGCATTTATCGGGGTTGTTGC
ACCTTACACGCCGTGATGCGGGGGATGTGACTTTAGCCAATGGCGATGAGTTTGAATATTCGGGCTATGAGCAAGATAAC
TATCTAGGCAAGATTGATTATGAGCAGGGCGATCACCAACTGGCCTTGAGCGTGACCCATTATCTCGATGAGGGCCGCAA
ACCTTGGGCTAATCGTCGTGGCCCCATGCCTGCCATCTCAGACTACAACATCAAAAAGTACGGCTCCTACGAGCAGGCGC
TGTATGCCACAACCGCCTATAACACCTATGAAGACAACACTTGGTCTGCCAATTATCGTTATTCGCCGAGCAATCCGCTG
ATTGATACCCAAGTGGTGATCTCCCATTCGGCGAATGCGCGCCACTGGGTAAGACCCGATATTGCGTGGGAGAAAATGAC
AGTTTCCGTAGGCAACTTTGGCCACGAATCTTGGCTAGATTACAAACGTGATTATATTGATATCAACAACTTGAGTTTGA
TTGGCGATCACGAGATCACCACAGGATTGCAGTACCGCAGTCTCGACCGTACTTCGCTTGTGTTTAACAAGAGTTATGAG
AAGAATCCTGAGAAAAACTTTGGCTGGTACACACCTTATTATCAACCTGAAGGTCGCCAAGACACCTATGCCGTGTATGT
TCGTGATGCGATTCATCTCACCAACGACTTAACCGTCACTCCCTCGCTGCGATATGACTTTATCTACAGCATAGGTCGGC
CAAATATTGCGCCAGATTATAACGACATCAGCGCGGGGCACGATTATAGCTCGACTCACCACTCGGGGTTCTCACCCAGA
TTAGGCATAGATTACCAACTGACAAACTACGCTCGGTTAAACTTTGATTACGCTTATAGCCTGCAGGCCCCTGTGGTGGA
TGAGATTTATGCCGTGCAATACGCGAGAGCCAGCATTACCGGCACGAGTCGCGACATCGATGTCGAACGCTTACATGCCT
TCAAGTTAGGCTTGATGACACAGCACCAGCATCTGCTTGCCAATGATGATGCGCTGACGACGCAGCTTACTCTGTTTGCC
AACCTAGGCCGCGATGATATCGCCCAGCGCCGTGGGGCTAAGTCTGATAAAACCCAGTTAATTCAAAGCGGTTACACCAA
TCTTGATGGTTACCATATTTACGGTGCTGATTTTGAGGCCCAATATCGCTATCAAGACGTGTTCAGTGATCTGGCGGTTT
CATGGCTGCAAGGTCAACACAATGGCTCACTCAGAGACAGCCAAGATGACGACGAGTATTTAGCCAACATGGCACCGCTC
GATATTCGTTTGCGTTTAGGCATGTATATTACCGATGATATTTCAGTGGCTTGGCAGGGTGCTTGGTATGATGCGCAAAC
TAATGTTCCCCACGGCGATATCTTTAATGCCGAGTCTCCGAGCGAAAATTACTTCCTGCAGAACCTGTACCTCGCCTATG
AGCCCCAAGCCAGTTTAAAGGGATTAAGCGTGCGTTTGATGGTGAAAAACCTCACCAATCTGCAAGTGGTGCCGTTTCTC
TCCGATGGGATCCCAGCTGCTGGACGCGATGTTCGCTTGAGTTTAGCCTATGAATTTTAA

Upstream 100 bases:

>100_bases
ATTTACACGTAAAGCCAAGTGAGAACTATTCTTATCTTATTCGTTAGTGCCTATAATGCCGCCCTATTTTTAGATTAGTT
TGTTAATAGGAAGACGTTGA

Downstream 100 bases:

>100_bases
AGATTAATCACCAAGGCAGTGTGGGCGCGGTTTATAAAACTTATAAAAAATAGGGTTATATTGCCTCAGCCCCCTGCCGA
AAAAAGCCGGTTTATGGCAT

Product: TonB-dependent heme/hemoglobin receptor family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 739; Mature: 738

Protein sequence:

>739_residues
MGCLPKFGKWKANRNLSLMGLCLLPSMPLYANEVLGEPKVEPIEILQVHGQQYRRAITVAKPGEAIISMEQIEEMQATTF
AEVIDDMAGAHIDGGTRSGGERINIWGFGETEDFNVYVDNAPVGFEQYRYGSFFLDPDLIKRVEVIKGAHDVRSGNGGFG
GAMYVVTKSADDFLKYDQAIGARVKTSYASNNDAAGYTGTVYGRVNPHLSGLLHLTRRDAGDVTLANGDEFEYSGYEQDN
YLGKIDYEQGDHQLALSVTHYLDEGRKPWANRRGPMPAISDYNIKKYGSYEQALYATTAYNTYEDNTWSANYRYSPSNPL
IDTQVVISHSANARHWVRPDIAWEKMTVSVGNFGHESWLDYKRDYIDINNLSLIGDHEITTGLQYRSLDRTSLVFNKSYE
KNPEKNFGWYTPYYQPEGRQDTYAVYVRDAIHLTNDLTVTPSLRYDFIYSIGRPNIAPDYNDISAGHDYSSTHHSGFSPR
LGIDYQLTNYARLNFDYAYSLQAPVVDEIYAVQYARASITGTSRDIDVERLHAFKLGLMTQHQHLLANDDALTTQLTLFA
NLGRDDIAQRRGAKSDKTQLIQSGYTNLDGYHIYGADFEAQYRYQDVFSDLAVSWLQGQHNGSLRDSQDDDEYLANMAPL
DIRLRLGMYITDDISVAWQGAWYDAQTNVPHGDIFNAESPSENYFLQNLYLAYEPQASLKGLSVRLMVKNLTNLQVVPFL
SDGIPAAGRDVRLSLAYEF

Sequences:

>Translated_739_residues
MGCLPKFGKWKANRNLSLMGLCLLPSMPLYANEVLGEPKVEPIEILQVHGQQYRRAITVAKPGEAIISMEQIEEMQATTF
AEVIDDMAGAHIDGGTRSGGERINIWGFGETEDFNVYVDNAPVGFEQYRYGSFFLDPDLIKRVEVIKGAHDVRSGNGGFG
GAMYVVTKSADDFLKYDQAIGARVKTSYASNNDAAGYTGTVYGRVNPHLSGLLHLTRRDAGDVTLANGDEFEYSGYEQDN
YLGKIDYEQGDHQLALSVTHYLDEGRKPWANRRGPMPAISDYNIKKYGSYEQALYATTAYNTYEDNTWSANYRYSPSNPL
IDTQVVISHSANARHWVRPDIAWEKMTVSVGNFGHESWLDYKRDYIDINNLSLIGDHEITTGLQYRSLDRTSLVFNKSYE
KNPEKNFGWYTPYYQPEGRQDTYAVYVRDAIHLTNDLTVTPSLRYDFIYSIGRPNIAPDYNDISAGHDYSSTHHSGFSPR
LGIDYQLTNYARLNFDYAYSLQAPVVDEIYAVQYARASITGTSRDIDVERLHAFKLGLMTQHQHLLANDDALTTQLTLFA
NLGRDDIAQRRGAKSDKTQLIQSGYTNLDGYHIYGADFEAQYRYQDVFSDLAVSWLQGQHNGSLRDSQDDDEYLANMAPL
DIRLRLGMYITDDISVAWQGAWYDAQTNVPHGDIFNAESPSENYFLQNLYLAYEPQASLKGLSVRLMVKNLTNLQVVPFL
SDGIPAAGRDVRLSLAYEF
>Mature_738_residues
GCLPKFGKWKANRNLSLMGLCLLPSMPLYANEVLGEPKVEPIEILQVHGQQYRRAITVAKPGEAIISMEQIEEMQATTFA
EVIDDMAGAHIDGGTRSGGERINIWGFGETEDFNVYVDNAPVGFEQYRYGSFFLDPDLIKRVEVIKGAHDVRSGNGGFGG
AMYVVTKSADDFLKYDQAIGARVKTSYASNNDAAGYTGTVYGRVNPHLSGLLHLTRRDAGDVTLANGDEFEYSGYEQDNY
LGKIDYEQGDHQLALSVTHYLDEGRKPWANRRGPMPAISDYNIKKYGSYEQALYATTAYNTYEDNTWSANYRYSPSNPLI
DTQVVISHSANARHWVRPDIAWEKMTVSVGNFGHESWLDYKRDYIDINNLSLIGDHEITTGLQYRSLDRTSLVFNKSYEK
NPEKNFGWYTPYYQPEGRQDTYAVYVRDAIHLTNDLTVTPSLRYDFIYSIGRPNIAPDYNDISAGHDYSSTHHSGFSPRL
GIDYQLTNYARLNFDYAYSLQAPVVDEIYAVQYARASITGTSRDIDVERLHAFKLGLMTQHQHLLANDDALTTQLTLFAN
LGRDDIAQRRGAKSDKTQLIQSGYTNLDGYHIYGADFEAQYRYQDVFSDLAVSWLQGQHNGSLRDSQDDDEYLANMAPLD
IRLRLGMYITDDISVAWQGAWYDAQTNVPHGDIFNAESPSENYFLQNLYLAYEPQASLKGLSVRLMVKNLTNLQVVPFLS
DGIPAAGRDVRLSLAYEF

Specific function: Heme receptor [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR011276
- InterPro:   IPR010949 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 83402; Mature: 83271

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS00061 ADH_SHORT ; PS00539 PYROKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCLPKFGKWKANRNLSLMGLCLLPSMPLYANEVLGEPKVEPIEILQVHGQQYRRAITVA
CCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHCCHHHHEEEEEE
KPGEAIISMEQIEEMQATTFAEVIDDMAGAHIDGGTRSGGERINIWGFGETEDFNVYVDN
CCCHHHEEHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEECCCCCCEEEEECC
APVGFEQYRYGSFFLDPDLIKRVEVIKGAHDVRSGNGGFGGAMYVVTKSADDFLKYDQAI
CCCCHHHEECCCEEECHHHHHHHHHHHCHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHH
GARVKTSYASNNDAAGYTGTVYGRVNPHLSGLLHLTRRDAGDVTLANGDEFEYSGYEQDN
CCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHEECCCCCCEEECCCCCCEECCCCCCC
YLGKIDYEQGDHQLALSVTHYLDEGRKPWANRRGPMPAISDYNIKKYGSYEQALYATTAY
CEEEEECCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEC
NTYEDNTWSANYRYSPSNPLIDTQVVISHSANARHWVRPDIAWEKMTVSVGNFGHESWLD
CCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCEECCCCCCEEEEEEEECCCCCHHHHH
YKRDYIDINNLSLIGDHEITTGLQYRSLDRTSLVFNKSYEKNPEKNFGWYTPYYQPEGRQ
HHHCEEEECCEEEEECCCHHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
DTYAVYVRDAIHLTNDLTVTPSLRYDFIYSIGRPNIAPDYNDISAGHDYSSTHHSGFSPR
CEEEEEEEEEEEECCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LGIDYQLTNYARLNFDYAYSLQAPVVDEIYAVQYARASITGTSRDIDVERLHAFKLGLMT
CCCEEEECCEEEEEEEEEEEECCCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHH
QHQHLLANDDALTTQLTLFANLGRDDIAQRRGAKSDKTQLIQSGYTNLDGYHIYGADFEA
CCCHHHCCCCCCEEEEEEEECCCHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEECCCCCC
QYRYQDVFSDLAVSWLQGQHNGSLRDSQDDDEYLANMAPLDIRLRLGMYITDDISVAWQG
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECEEEECCCEEEEEC
AWYDAQTNVPHGDIFNAESPSENYFLQNLYLAYEPQASLKGLSVRLMVKNLTNLQVVPFL
EEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEE
SDGIPAAGRDVRLSLAYEF
CCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
GCLPKFGKWKANRNLSLMGLCLLPSMPLYANEVLGEPKVEPIEILQVHGQQYRRAITVA
CCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHCCHHHHEEEEEE
KPGEAIISMEQIEEMQATTFAEVIDDMAGAHIDGGTRSGGERINIWGFGETEDFNVYVDN
CCCHHHEEHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEECCCCCCEEEEECC
APVGFEQYRYGSFFLDPDLIKRVEVIKGAHDVRSGNGGFGGAMYVVTKSADDFLKYDQAI
CCCCHHHEECCCEEECHHHHHHHHHHHCHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHH
GARVKTSYASNNDAAGYTGTVYGRVNPHLSGLLHLTRRDAGDVTLANGDEFEYSGYEQDN
CCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHEECCCCCCEEECCCCCCEECCCCCCC
YLGKIDYEQGDHQLALSVTHYLDEGRKPWANRRGPMPAISDYNIKKYGSYEQALYATTAY
CEEEEECCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEC
NTYEDNTWSANYRYSPSNPLIDTQVVISHSANARHWVRPDIAWEKMTVSVGNFGHESWLD
CCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCEECCCCCCEEEEEEEECCCCCHHHHH
YKRDYIDINNLSLIGDHEITTGLQYRSLDRTSLVFNKSYEKNPEKNFGWYTPYYQPEGRQ
HHHCEEEECCEEEEECCCHHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
DTYAVYVRDAIHLTNDLTVTPSLRYDFIYSIGRPNIAPDYNDISAGHDYSSTHHSGFSPR
CEEEEEEEEEEEECCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LGIDYQLTNYARLNFDYAYSLQAPVVDEIYAVQYARASITGTSRDIDVERLHAFKLGLMT
CCCEEEECCEEEEEEEEEEEECCCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHH
QHQHLLANDDALTTQLTLFANLGRDDIAQRRGAKSDKTQLIQSGYTNLDGYHIYGADFEA
CCCHHHCCCCCCEEEEEEEECCCHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEECCCCCC
QYRYQDVFSDLAVSWLQGQHNGSLRDSQDDDEYLANMAPLDIRLRLGMYITDDISVAWQG
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECEEEECCCEEEEEC
AWYDAQTNVPHGDIFNAESPSENYFLQNLYLAYEPQASLKGLSVRLMVKNLTNLQVVPFL
EEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEE
SDGIPAAGRDVRLSLAYEF
CCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9712775 [H]