| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is glgP [H]
Identifier: 126173571
GI number: 126173571
Start: 1522257
End: 1524788
Strand: Direct
Name: glgP [H]
Synonym: Sbal_1333
Alternate gene names: 126173571
Gene position: 1522257-1524788 (Clockwise)
Preceding gene: 126173570
Following gene: 126173572
Centisome position: 29.69
GC content: 50.2
Gene sequence:
>2532_bases ATGACTGACGAAAGCGAACTGAGCCCAAATACCAGCGAAAAACCCGTATCATCCGCGCCAAAAGCGGCGAGTAAGAAGGC GCCAGCTAAGCGTCAGGCCAAACCTAAAGTCGTTGAGCCCTGCGAGCCCTGCGATGCCTTGCCCGCTTCTTTTGAGCGCC ATTTACGTTATGGACTCAGCCGTGGCGAAGGCGTGAGCTGCGAATTATTTCAAGCGTTGGCCTATAGCGTCAAAGAACAG ATGCTAGACAATTGGCGTCAGATCCGTGTGGATGACAGCCATTTTCAGCGCAAGCAAGTGGCGTATTTATCCCTTGAGTT TTTAATGGGCAGGGCGCTGGGCAATGCACTGCTGAGTCTAGATTTGCAACAAGATAGCCGTGATGCCTTGAGTAACTATG CCGTATCGCTGGAAGAGTTAGAAGAAGCCGAACATGATGCCGGTTTAGGTAACGGCGGTTTAGGTCGATTGGCGGCGTGT TTCCTTGATAGCTGCGCCAGCATGGATTTATCCGTGACGGGTTATGGCATACGTTACGAATATGGCATGTTTGCCCAGAA GATAGTTGATGGTTATCAGGTTGAGCGTCCCGATCGTTGGCTGCGCGAAGGCAACCCGTGGGAAGTGCGCGTGCCGACCC ACAACGTGACAGTGCCATTTTTTGGCCACACAGAATCCTATGTCGATAAACAGGGTCGTAGGCACATTATTTGGGTTGAA ACCCAAGATGTGCTCGCCGTCGCCTATGACATGCCAGTTCCCGGTTATCGCAATGGACGGGTGAATACCCTGAGATTGTG GAAGGCCGAAGCGACCGATGACTTTGATTTAGCTGAGTTTAACCAAGGCGACTACACAGAAGCCGTGGCCCGTAAAAACT TGGCCGAGCAGATCACTATGGTGCTCTATCCCAATGATGCGAGCGAGAACGGCAAAGAGCTGCGATTACGTCAGCAATAC TTTTTATCCTCCGCCAGTTTGCAAGATTTGCTCAAACGTTGGGTGAGTCGCCATGGCCATGATTTCACCCAGTTTGCCGC TAAAAATGTGATGCAGCTGAATGACACTCACCCCAGCATTGCCGTACCTGAGTTGATGCGGTTATTGATCGACGAATACG GTTTGGAATGGGACAGTGCGTGGGCGATTACCAGCCAAACCATGGCTTACACTAACCATACCCTATTGCCCGAAGCACTA GAGCGTTGGCCCGTGCGCATGATGGCGCAGATGCTGCCGCGTATTTTAGAAATCATTTATGAAATCAACGCCCGCTACCT AGATTTAGTCGCCCACCATTGGCCGGGGGACGCTAGCAAACTGGCGAGTATGTCGATTATTCAAGATGGCCCCCATCCCC ACGTGCGCATGGCATATCTGGCGATTGTGGCGAGTTTTTCGGTCAACGGCGTCGCGGGTTTACACACGCAACTGCTTAAA TCTGGGTTGTTTAAGGATTTCTATGAGTTGTGGCCGCACAAGTTTAATAACCGCACCAATGGCGTGACCCCAAGGCGTTG GCTTGCCCATTGTAATCCTGCCTTAGCTAAGTTATTGACCGCCCATTTAGGTAAAGAGTGGGTGACAGATTTAAGCCAGT TAACGGCGCTTAATGCCCTCACACAGGACACGGCATTTATCCAAAAATGGCGTGATGTGAAGCAAGCCAACAAGGCTTTG CTGGCGAAGATGATTGCTAAAGAATGTGGCGTCGAGTTCGATCCATCTATGTTGTTTGATGTGCAAGTGAAGCGTATTCA CGAATATAAACGTCAGCTACTCAATATCTTACATGTGGTTCATCTCTATCATCAGATCCAACAAGGCCACACCGAAAACA TGGTGCCACGTTGCGTGTTGATCGGCGGTAAAGCGGCGCCCGGTTACTTTATGGCTAAGTTGATCATCAAGCTCGCCAGC AATGTCGCCCATATGGTCAATTCCGATCCTTTGGTGACGCCTTACCTACGTTTTGCTTTCTTACCTAACTACAACGTTAG CGCCATGGAAAAAATCTGTCCGGGGACGGATTTGTCCGAGCAAATTTCGACTGCGGGTAAAGAAGCATCGGGCACGGGCA ATATGAAGTTTATGATGAACGGCGCACTGACGATTGGCACTATGGATGGCGCCAATATCGAGATGTTAGAGGAAGTGGGT TCTGAGAACTTCTTCCTGTTTGGACTCAATGCAGAGCAGGTCTCAGAGGTACGTAACCACTATCATCCACGCAGCATTAT TGACGATTCACCGGCGTTATCTGAGGTGATGAAGTTACTCAAAAGTGGTCATTTCAATCTGCTGGAGCCGGGGATTTTCG ATCCCATTATTGCCGCCATTGAATGTAGCGACGATCAATGGATGACGGCCGCTGACTTTGACAGTTATCGAGTCGTGCAA GAAGCCGTGGCGCGGGCCTATAAAGATCCGCAGGTATGGACGCAAATGAGTATTCGCAATACTGCCGCCAGCGGGCGTTT TTCGAGTGATGTGACGATCGCGGGTTATCGCGATGAAATTTGGAAACTGTAA
Upstream 100 bases:
>100_bases CGCTGGATGCTCAGATCTCTACGACGCGATACTTGCTGCAAGATCGCAGTCTCATGCTTTTTCATGCTGATTTGATTTTC AAGAAATGAAGGAATTAACT
Downstream 100 bases:
>100_bases GGGTTGGGCTCTGGGTAATAAGTTTTGTTATAGCGGATGAGTATAAGTGTTTGAAAGGAAAGCAACAATCAATGGAAGGA ATGGGGAATGCAAGTGAGAA
Product: glycogen/starch/alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 843; Mature: 842
Protein sequence:
>843_residues MTDESELSPNTSEKPVSSAPKAASKKAPAKRQAKPKVVEPCEPCDALPASFERHLRYGLSRGEGVSCELFQALAYSVKEQ MLDNWRQIRVDDSHFQRKQVAYLSLEFLMGRALGNALLSLDLQQDSRDALSNYAVSLEELEEAEHDAGLGNGGLGRLAAC FLDSCASMDLSVTGYGIRYEYGMFAQKIVDGYQVERPDRWLREGNPWEVRVPTHNVTVPFFGHTESYVDKQGRRHIIWVE TQDVLAVAYDMPVPGYRNGRVNTLRLWKAEATDDFDLAEFNQGDYTEAVARKNLAEQITMVLYPNDASENGKELRLRQQY FLSSASLQDLLKRWVSRHGHDFTQFAAKNVMQLNDTHPSIAVPELMRLLIDEYGLEWDSAWAITSQTMAYTNHTLLPEAL ERWPVRMMAQMLPRILEIIYEINARYLDLVAHHWPGDASKLASMSIIQDGPHPHVRMAYLAIVASFSVNGVAGLHTQLLK SGLFKDFYELWPHKFNNRTNGVTPRRWLAHCNPALAKLLTAHLGKEWVTDLSQLTALNALTQDTAFIQKWRDVKQANKAL LAKMIAKECGVEFDPSMLFDVQVKRIHEYKRQLLNILHVVHLYHQIQQGHTENMVPRCVLIGGKAAPGYFMAKLIIKLAS NVAHMVNSDPLVTPYLRFAFLPNYNVSAMEKICPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTMDGANIEMLEEVG SENFFLFGLNAEQVSEVRNHYHPRSIIDDSPALSEVMKLLKSGHFNLLEPGIFDPIIAAIECSDDQWMTAADFDSYRVVQ EAVARAYKDPQVWTQMSIRNTAASGRFSSDVTIAGYRDEIWKL
Sequences:
>Translated_843_residues MTDESELSPNTSEKPVSSAPKAASKKAPAKRQAKPKVVEPCEPCDALPASFERHLRYGLSRGEGVSCELFQALAYSVKEQ MLDNWRQIRVDDSHFQRKQVAYLSLEFLMGRALGNALLSLDLQQDSRDALSNYAVSLEELEEAEHDAGLGNGGLGRLAAC FLDSCASMDLSVTGYGIRYEYGMFAQKIVDGYQVERPDRWLREGNPWEVRVPTHNVTVPFFGHTESYVDKQGRRHIIWVE TQDVLAVAYDMPVPGYRNGRVNTLRLWKAEATDDFDLAEFNQGDYTEAVARKNLAEQITMVLYPNDASENGKELRLRQQY FLSSASLQDLLKRWVSRHGHDFTQFAAKNVMQLNDTHPSIAVPELMRLLIDEYGLEWDSAWAITSQTMAYTNHTLLPEAL ERWPVRMMAQMLPRILEIIYEINARYLDLVAHHWPGDASKLASMSIIQDGPHPHVRMAYLAIVASFSVNGVAGLHTQLLK SGLFKDFYELWPHKFNNRTNGVTPRRWLAHCNPALAKLLTAHLGKEWVTDLSQLTALNALTQDTAFIQKWRDVKQANKAL LAKMIAKECGVEFDPSMLFDVQVKRIHEYKRQLLNILHVVHLYHQIQQGHTENMVPRCVLIGGKAAPGYFMAKLIIKLAS NVAHMVNSDPLVTPYLRFAFLPNYNVSAMEKICPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTMDGANIEMLEEVG SENFFLFGLNAEQVSEVRNHYHPRSIIDDSPALSEVMKLLKSGHFNLLEPGIFDPIIAAIECSDDQWMTAADFDSYRVVQ EAVARAYKDPQVWTQMSIRNTAASGRFSSDVTIAGYRDEIWKL >Mature_842_residues TDESELSPNTSEKPVSSAPKAASKKAPAKRQAKPKVVEPCEPCDALPASFERHLRYGLSRGEGVSCELFQALAYSVKEQM LDNWRQIRVDDSHFQRKQVAYLSLEFLMGRALGNALLSLDLQQDSRDALSNYAVSLEELEEAEHDAGLGNGGLGRLAACF LDSCASMDLSVTGYGIRYEYGMFAQKIVDGYQVERPDRWLREGNPWEVRVPTHNVTVPFFGHTESYVDKQGRRHIIWVET QDVLAVAYDMPVPGYRNGRVNTLRLWKAEATDDFDLAEFNQGDYTEAVARKNLAEQITMVLYPNDASENGKELRLRQQYF LSSASLQDLLKRWVSRHGHDFTQFAAKNVMQLNDTHPSIAVPELMRLLIDEYGLEWDSAWAITSQTMAYTNHTLLPEALE RWPVRMMAQMLPRILEIIYEINARYLDLVAHHWPGDASKLASMSIIQDGPHPHVRMAYLAIVASFSVNGVAGLHTQLLKS GLFKDFYELWPHKFNNRTNGVTPRRWLAHCNPALAKLLTAHLGKEWVTDLSQLTALNALTQDTAFIQKWRDVKQANKALL AKMIAKECGVEFDPSMLFDVQVKRIHEYKRQLLNILHVVHLYHQIQQGHTENMVPRCVLIGGKAAPGYFMAKLIIKLASN VAHMVNSDPLVTPYLRFAFLPNYNVSAMEKICPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTMDGANIEMLEEVGS ENFFLFGLNAEQVSEVRNHYHPRSIIDDSPALSEVMKLLKSGHFNLLEPGIFDPIIAAIECSDDQWMTAADFDSYRVVQE AVARAYKDPQVWTQMSIRNTAASGRFSSDVTIAGYRDEIWKL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI5032009, Length=824, Percent_Identity=50.6067961165049, Blast_Score=796, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=804, Percent_Identity=52.1144278606965, Blast_Score=793, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=826, Percent_Identity=49.273607748184, Blast_Score=772, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=824, Percent_Identity=47.6941747572816, Blast_Score=730, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=664, Percent_Identity=52.5602409638554, Blast_Score=707, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=750, Percent_Identity=48.6666666666667, Blast_Score=718, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=811, Percent_Identity=46.4858199753391, Blast_Score=699, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=845, Percent_Identity=48.2840236686391, Blast_Score=787, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=829, Percent_Identity=48.6127864897467, Blast_Score=786, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=815, Percent_Identity=46.2576687116564, Blast_Score=682, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=805, Percent_Identity=49.9378881987578, Blast_Score=781, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=805, Percent_Identity=49.9378881987578, Blast_Score=781, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 95028; Mature: 94897
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDESELSPNTSEKPVSSAPKAASKKAPAKRQAKPKVVEPCEPCDALPASFERHLRYGLS CCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCC RGEGVSCELFQALAYSVKEQMLDNWRQIRVDDSHFQRKQVAYLSLEFLMGRALGNALLSL CCCCCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE DLQQDSRDALSNYAVSLEELEEAEHDAGLGNGGLGRLAACFLDSCASMDLSVTGYGIRYE ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECEEEEH YGMFAQKIVDGYQVERPDRWLREGNPWEVRVPTHNVTVPFFGHTESYVDKQGRRHIIWVE HHHHHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCEEEEECCCCHHHHHHCCCEEEEEEE TQDVLAVAYDMPVPGYRNGRVNTLRLWKAEATDDFDLAEFNQGDYTEAVARKNLAEQITM CCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHEEE VLYPNDASENGKELRLRQQYFLSSASLQDLLKRWVSRHGHDFTQFAAKNVMQLNDTHPSI EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC AVPELMRLLIDEYGLEWDSAWAITSQTMAYTNHTLLPEALERWPVRMMAQMLPRILEIIY CHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHH EINARYLDLVAHHWPGDASKLASMSIIQDGPHPHVRMAYLAIVASFSVNGVAGLHTQLLK HHCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH SGLFKDFYELWPHKFNNRTNGVTPRRWLAHCNPALAKLLTAHLGKEWVTDLSQLTALNAL HHHHHHHHHHCCHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHH TQDTAFIQKWRDVKQANKALLAKMIAKECGVEFDPSMLFDVQVKRIHEYKRQLLNILHVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HLYHQIQQGHTENMVPRCVLIGGKAAPGYFMAKLIIKLASNVAHMVNSDPLVTPYLRFAF HHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC LPNYNVSAMEKICPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTMDGANIEMLEEVG CCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEECEEEEEECCCCCHHHHHHCC SENFFLFGLNAEQVSEVRNHYHPRSIIDDSPALSEVMKLLKSGHFNLLEPGIFDPIIAAI CCCEEEEECCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHEE ECSDDQWMTAADFDSYRVVQEAVARAYKDPQVWTQMSIRNTAASGRFSSDVTIAGYRDEI ECCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHH WKL HCC >Mature Secondary Structure TDESELSPNTSEKPVSSAPKAASKKAPAKRQAKPKVVEPCEPCDALPASFERHLRYGLS CCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCC RGEGVSCELFQALAYSVKEQMLDNWRQIRVDDSHFQRKQVAYLSLEFLMGRALGNALLSL CCCCCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE DLQQDSRDALSNYAVSLEELEEAEHDAGLGNGGLGRLAACFLDSCASMDLSVTGYGIRYE ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECEEEEH YGMFAQKIVDGYQVERPDRWLREGNPWEVRVPTHNVTVPFFGHTESYVDKQGRRHIIWVE HHHHHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCEEEEECCCCHHHHHHCCCEEEEEEE TQDVLAVAYDMPVPGYRNGRVNTLRLWKAEATDDFDLAEFNQGDYTEAVARKNLAEQITM CCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHEEE VLYPNDASENGKELRLRQQYFLSSASLQDLLKRWVSRHGHDFTQFAAKNVMQLNDTHPSI EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC AVPELMRLLIDEYGLEWDSAWAITSQTMAYTNHTLLPEALERWPVRMMAQMLPRILEIIY CHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHH EINARYLDLVAHHWPGDASKLASMSIIQDGPHPHVRMAYLAIVASFSVNGVAGLHTQLLK HHCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH SGLFKDFYELWPHKFNNRTNGVTPRRWLAHCNPALAKLLTAHLGKEWVTDLSQLTALNAL HHHHHHHHHHCCHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHH TQDTAFIQKWRDVKQANKALLAKMIAKECGVEFDPSMLFDVQVKRIHEYKRQLLNILHVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HLYHQIQQGHTENMVPRCVLIGGKAAPGYFMAKLIIKLASNVAHMVNSDPLVTPYLRFAF HHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC LPNYNVSAMEKICPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTMDGANIEMLEEVG CCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEECEEEEEECCCCCHHHHHHCC SENFFLFGLNAEQVSEVRNHYHPRSIIDDSPALSEVMKLLKSGHFNLLEPGIFDPIIAAI CCCEEEEECCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHEE ECSDDQWMTAADFDSYRVVQEAVARAYKDPQVWTQMSIRNTAASGRFSSDVTIAGYRDEI ECCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHH WKL HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]