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The map label for this gene is glgB [H]

Identifier: 126173569

GI number: 126173569

Start: 1517811

End: 1520042

Strand: Direct

Name: glgB [H]

Synonym: Sbal_1331

Alternate gene names: 126173569

Gene position: 1517811-1520042 (Clockwise)

Preceding gene: 126173568

Following gene: 126173570

Centisome position: 29.6

GC content: 50.09

Gene sequence:

>2232_bases
ATGATGACTCAAGCCAATGCCTATTTCTACGATGGCGCCGACGTCGCCCTACTTAATGGTCAATACACTGATGTTTTTTC
GCTCTTGGGTATGCACAGTGCCAACGAGGGTAAGGCATTAATTGTTCGTTGTTTTTTACGTAATGCAATCAGTGTGGATG
TGATCAGCATTAAAGATGGCCGCAAAGTAGCGAGTCTAGACAAAGTCAACGAGCAGGGATTGTTCGCCGGTACGCTGGGG
CGACGCGTCAAACCGTTTCTCTATTTGCTACGGGTAGAATATCCCTTGTGTCAGTTAGATATAGTCGACCCTTATCAGTT
TGATTCATTGCTTAATAGTGACGATATTTACCTGTTTGGTGAAGGCAGCGCCGAGCGCGCCTATGAGTTTTTAGGCGCCA
ACTGGCGTCAAACCCAAGGCGTTGAAGGTGTGCATTTTTGTGTGTGGGCACCCAATGCCAAACGGGTTTCTGTGGTGGGG
GATTTCAACCATTGGGACGATACTCGCCATGTAATGCGCCAACATCTTGCCAATGGTTTGTGGGAGCTATTTCTGCCCAA
TGTGGTTGAAGGCGCCCACTATAAGTTTGATTTGGTTTATCAAAATGGTGAGCGTCATACCAAGTCCGACCCCATGGCGA
CCCAAATGGAATGCGCGCCCCATAATGCTTCTATCGTGCCCCCAAAAGCCCATCACAGTTGGAATGATACCGCTTGGATG
AGTAAGCGAGCGGCGACTGCTTGGCATAAAGCGCCCATGTCGGCCTACGAAGTGCACTTAGGTTCGTGGCGTCGTAAGGG
AGAGCAAGGCGAGCAATATCTTGATTATCAAGACTTGATTGAACAGCTTATTCCCTATGTGAAGGAGCAAGGTTTTACCC
ACATTGAACTGATGCCGATCAGCGAGTTTCCCTTCGATGGTTCGTGGGGATATCAGCCTGTGGGTCTCTATGCACCGACC
CACAGATTTGGCGATGCCAATGGGTTAAAAGCCTTTGTGGATGCCTGCCATCAGGCGGGAATTGGTATCATCCTCGATTG
GGTGTCGGCGCATTTTCCTAAGGATCCCCACGGCTTAGTGCGTTTCGATGGCACTTGTTTGTATGAGCACGAAGATCCTC
GCAAGGGCACACATCCCGATTGGGATACCCTGATTTATAACTATGATCGCGGTGAAGTGCGCAGTTTCTTGTTGAGTAAT
GCCTGTTACTGGCTGCGGGAGTTTCATTTTGATGGCCTGCGTCTCGATGCCGTGTCTTCTATGTTGTACCTCGATTACAG
CCGCGAGCCGGGCCAATGGCTGCCCAATGCCTATGGTGGACGGGAGAATCTCGAAGCCATTAGTTTCTTACAAATTTTGA
ATCAACGCCTGTACCAAGCTTTCCCCGGCATTTGCATGATTGCCGAAGAGTCCACCGCCTTTGCGGGGGTGACTAAGCCG
ACGGATCAGCAAGGTCTCGGCTTTGGCTTTAAATGGAACATGGGCTGGATGAATGACAGCTTAAGCTACTTAGGCCGAGA
TCCGCTTTACCGCCAATTCCACCATCATCAATTGACCTTCAGTTTGATGTACGCCTATACCGAGCAATTTATGTTGTCCG
TGAGTCACGATGAAGTGGTCCACGGCAAGGGCTCGTTGCTACATAAAATTCCCGGTGACGATTGGCAGAAATTTGCGACC
CTGCGTGCTTATTACGGTTTTATGTGGGGGCATCCCGGTAAGAAATTACTCTTTATGGGCTGCGAGTTTGGTCAGCGAAA
TGAGTGGAACCATAACCAGAGTTTAGATTGGCACTTATTGGCTTATGAACCGCACCAAGGTGTGCAACGTTGGCTTAAAG
ATCTCAATCACTTGTATCAAGCCATGCCTGCTTTATCAGTTCAGGATTACGAGGGGGCAGGATTCAGTTGGCTAGATTGT
GAAAATAGCCGCGACAGCATCTTTACCTTTGTGCGTTACGGCTTAGCGGGTGATGCGCCGTTAGTGTTTGTCATCAACAT
GACGCCCCAATTGCACACTGGGTTCCGTATTGGTTTGCCCTTGGCGGGGGATTACCGCGAATACCTGAATAGCGATAGCC
AGATTTATGGTGGCAGTAACCAAGGTAATGCGGGCACTGTCGTTGCTGAGTCGCTGCCGTGGCAGGGCATGGCGCAGAGC
GCGCTGATCACTGTGCCGCCCTTGGGTTGTCTAGTGATTGGGCCTGCAACTGGATTGGCTGAGGCGAACTAG

Upstream 100 bases:

>100_bases
TGCCACATTATGCCATCCCTAAAGGTTCGATAATTAGGGGGTGTTATGCGGATAAAGAGTGCCAATTTGCAAGTTTAATT
GACTGATAAACGGAAGAAAA

Downstream 100 bases:

>100_bases
TATGCAAAAGCCCACAGCTGATGATATCAAGCTCAACCCTGACGCTAAACATAACCCTTCTCAAAATGAGAAATGGGCCT
TGGGAGCCGGTGAGCCTTTT

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 743; Mature: 743

Protein sequence:

>743_residues
MMTQANAYFYDGADVALLNGQYTDVFSLLGMHSANEGKALIVRCFLRNAISVDVISIKDGRKVASLDKVNEQGLFAGTLG
RRVKPFLYLLRVEYPLCQLDIVDPYQFDSLLNSDDIYLFGEGSAERAYEFLGANWRQTQGVEGVHFCVWAPNAKRVSVVG
DFNHWDDTRHVMRQHLANGLWELFLPNVVEGAHYKFDLVYQNGERHTKSDPMATQMECAPHNASIVPPKAHHSWNDTAWM
SKRAATAWHKAPMSAYEVHLGSWRRKGEQGEQYLDYQDLIEQLIPYVKEQGFTHIELMPISEFPFDGSWGYQPVGLYAPT
HRFGDANGLKAFVDACHQAGIGIILDWVSAHFPKDPHGLVRFDGTCLYEHEDPRKGTHPDWDTLIYNYDRGEVRSFLLSN
ACYWLREFHFDGLRLDAVSSMLYLDYSREPGQWLPNAYGGRENLEAISFLQILNQRLYQAFPGICMIAEESTAFAGVTKP
TDQQGLGFGFKWNMGWMNDSLSYLGRDPLYRQFHHHQLTFSLMYAYTEQFMLSVSHDEVVHGKGSLLHKIPGDDWQKFAT
LRAYYGFMWGHPGKKLLFMGCEFGQRNEWNHNQSLDWHLLAYEPHQGVQRWLKDLNHLYQAMPALSVQDYEGAGFSWLDC
ENSRDSIFTFVRYGLAGDAPLVFVINMTPQLHTGFRIGLPLAGDYREYLNSDSQIYGGSNQGNAGTVVAESLPWQGMAQS
ALITVPPLGCLVIGPATGLAEAN

Sequences:

>Translated_743_residues
MMTQANAYFYDGADVALLNGQYTDVFSLLGMHSANEGKALIVRCFLRNAISVDVISIKDGRKVASLDKVNEQGLFAGTLG
RRVKPFLYLLRVEYPLCQLDIVDPYQFDSLLNSDDIYLFGEGSAERAYEFLGANWRQTQGVEGVHFCVWAPNAKRVSVVG
DFNHWDDTRHVMRQHLANGLWELFLPNVVEGAHYKFDLVYQNGERHTKSDPMATQMECAPHNASIVPPKAHHSWNDTAWM
SKRAATAWHKAPMSAYEVHLGSWRRKGEQGEQYLDYQDLIEQLIPYVKEQGFTHIELMPISEFPFDGSWGYQPVGLYAPT
HRFGDANGLKAFVDACHQAGIGIILDWVSAHFPKDPHGLVRFDGTCLYEHEDPRKGTHPDWDTLIYNYDRGEVRSFLLSN
ACYWLREFHFDGLRLDAVSSMLYLDYSREPGQWLPNAYGGRENLEAISFLQILNQRLYQAFPGICMIAEESTAFAGVTKP
TDQQGLGFGFKWNMGWMNDSLSYLGRDPLYRQFHHHQLTFSLMYAYTEQFMLSVSHDEVVHGKGSLLHKIPGDDWQKFAT
LRAYYGFMWGHPGKKLLFMGCEFGQRNEWNHNQSLDWHLLAYEPHQGVQRWLKDLNHLYQAMPALSVQDYEGAGFSWLDC
ENSRDSIFTFVRYGLAGDAPLVFVINMTPQLHTGFRIGLPLAGDYREYLNSDSQIYGGSNQGNAGTVVAESLPWQGMAQS
ALITVPPLGCLVIGPATGLAEAN
>Mature_743_residues
MMTQANAYFYDGADVALLNGQYTDVFSLLGMHSANEGKALIVRCFLRNAISVDVISIKDGRKVASLDKVNEQGLFAGTLG
RRVKPFLYLLRVEYPLCQLDIVDPYQFDSLLNSDDIYLFGEGSAERAYEFLGANWRQTQGVEGVHFCVWAPNAKRVSVVG
DFNHWDDTRHVMRQHLANGLWELFLPNVVEGAHYKFDLVYQNGERHTKSDPMATQMECAPHNASIVPPKAHHSWNDTAWM
SKRAATAWHKAPMSAYEVHLGSWRRKGEQGEQYLDYQDLIEQLIPYVKEQGFTHIELMPISEFPFDGSWGYQPVGLYAPT
HRFGDANGLKAFVDACHQAGIGIILDWVSAHFPKDPHGLVRFDGTCLYEHEDPRKGTHPDWDTLIYNYDRGEVRSFLLSN
ACYWLREFHFDGLRLDAVSSMLYLDYSREPGQWLPNAYGGRENLEAISFLQILNQRLYQAFPGICMIAEESTAFAGVTKP
TDQQGLGFGFKWNMGWMNDSLSYLGRDPLYRQFHHHQLTFSLMYAYTEQFMLSVSHDEVVHGKGSLLHKIPGDDWQKFAT
LRAYYGFMWGHPGKKLLFMGCEFGQRNEWNHNQSLDWHLLAYEPHQGVQRWLKDLNHLYQAMPALSVQDYEGAGFSWLDC
ENSRDSIFTFVRYGLAGDAPLVFVINMTPQLHTGFRIGLPLAGDYREYLNSDSQIYGGSNQGNAGTVVAESLPWQGMAQS
ALITVPPLGCLVIGPATGLAEAN

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=712, Percent_Identity=27.1067415730337, Blast_Score=182, Evalue=8e-46,
Organism=Escherichia coli, GI1789839, Length=721, Percent_Identity=49.9306518723994, Blast_Score=709, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=624, Percent_Identity=26.6025641025641, Blast_Score=191, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI32564391, Length=588, Percent_Identity=26.0204081632653, Blast_Score=165, Evalue=7e-41,
Organism=Saccharomyces cerevisiae, GI6320826, Length=689, Percent_Identity=24.2380261248186, Blast_Score=167, Evalue=4e-42,
Organism=Drosophila melanogaster, GI28573410, Length=611, Percent_Identity=28.3142389525368, Blast_Score=194, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 84309; Mature: 84309

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTQANAYFYDGADVALLNGQYTDVFSLLGMHSANEGKALIVRCFLRNAISVDVISIKDG
CCCCCCEEEECCCCEEEECCCHHHHHHHHHCCCCCCCCEEHHHHHHHCCCEEEEEEECCC
RKVASLDKVNEQGLFAGTLGRRVKPFLYLLRVEYPLCQLDIVDPYQFDSLLNSDDIYLFG
CEEHHHHHCCCCCEEEHHHHHHHHHHHEEEEECCCEEEEEECCCHHHHHHCCCCCEEEEE
EGSAERAYEFLGANWRQTQGVEGVHFCVWAPNAKRVSVVGDFNHWDDTRHVMRQHLANGL
CCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
WELFLPNVVEGAHYKFDLVYQNGERHTKSDPMATQMECAPHNASIVPPKAHHSWNDTAWM
HHHHCHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHH
SKRAATAWHKAPMSAYEVHLGSWRRKGEQGEQYLDYQDLIEQLIPYVKEQGFTHIELMPI
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEEEEC
SEFPFDGSWGYQPVGLYAPTHRFGDANGLKAFVDACHQAGIGIILDWVSAHFPKDPHGLV
CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCEE
RFDGTCLYEHEDPRKGTHPDWDTLIYNYDRGEVRSFLLSNACYWLREFHFDGLRLDAVSS
EECCEEEECCCCCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHE
MLYLDYSREPGQWLPNAYGGRENLEAISFLQILNQRLYQAFPGICMIAEESTAFAGVTKP
EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCC
TDQQGLGFGFKWNMGWMNDSLSYLGRDPLYRQFHHHQLTFSLMYAYTEQFMLSVSHDEVV
CCCCCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEE
HGKGSLLHKIPGDDWQKFATLRAYYGFMWGHPGKKLLFMGCEFGQRNEWNHNQSLDWHLL
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE
AYEPHQGVQRWLKDLNHLYQAMPALSVQDYEGAGFSWLDCENSRDSIFTFVRYGLAGDAP
EECCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHCCCCCCC
LVFVINMTPQLHTGFRIGLPLAGDYREYLNSDSQIYGGSNQGNAGTVVAESLPWQGMAQS
EEEEEECCCCCCCCEEECCCCCCCHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCCCCC
ALITVPPLGCLVIGPATGLAEAN
EEEEECCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MMTQANAYFYDGADVALLNGQYTDVFSLLGMHSANEGKALIVRCFLRNAISVDVISIKDG
CCCCCCEEEECCCCEEEECCCHHHHHHHHHCCCCCCCCEEHHHHHHHCCCEEEEEEECCC
RKVASLDKVNEQGLFAGTLGRRVKPFLYLLRVEYPLCQLDIVDPYQFDSLLNSDDIYLFG
CEEHHHHHCCCCCEEEHHHHHHHHHHHEEEEECCCEEEEEECCCHHHHHHCCCCCEEEEE
EGSAERAYEFLGANWRQTQGVEGVHFCVWAPNAKRVSVVGDFNHWDDTRHVMRQHLANGL
CCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
WELFLPNVVEGAHYKFDLVYQNGERHTKSDPMATQMECAPHNASIVPPKAHHSWNDTAWM
HHHHCHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHH
SKRAATAWHKAPMSAYEVHLGSWRRKGEQGEQYLDYQDLIEQLIPYVKEQGFTHIELMPI
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEEEEC
SEFPFDGSWGYQPVGLYAPTHRFGDANGLKAFVDACHQAGIGIILDWVSAHFPKDPHGLV
CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCEE
RFDGTCLYEHEDPRKGTHPDWDTLIYNYDRGEVRSFLLSNACYWLREFHFDGLRLDAVSS
EECCEEEECCCCCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHE
MLYLDYSREPGQWLPNAYGGRENLEAISFLQILNQRLYQAFPGICMIAEESTAFAGVTKP
EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCC
TDQQGLGFGFKWNMGWMNDSLSYLGRDPLYRQFHHHQLTFSLMYAYTEQFMLSVSHDEVV
CCCCCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEE
HGKGSLLHKIPGDDWQKFATLRAYYGFMWGHPGKKLLFMGCEFGQRNEWNHNQSLDWHLL
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE
AYEPHQGVQRWLKDLNHLYQAMPALSVQDYEGAGFSWLDCENSRDSIFTFVRYGLAGDAP
EECCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHCCCCCCC
LVFVINMTPQLHTGFRIGLPLAGDYREYLNSDSQIYGGSNQGNAGTVVAESLPWQGMAQS
EEEEEECCCCCCCCEEECCCCCCCHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCCCCC
ALITVPPLGCLVIGPATGLAEAN
EEEEECCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA