| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173473
Identifier: 126173473
GI number: 126173473
Start: 1421338
End: 1421688
Strand: Reverse
Name: 126173473
Synonym: Sbal_1235
Alternate gene names: NA
Gene position: 1421688-1421338 (Counterclockwise)
Preceding gene: 126173474
Following gene: 126173472
Centisome position: 27.73
GC content: 47.29
Gene sequence:
>351_bases ATGATGCCAGAATTTATCCCTGTACTTGGGATCTTAGGCTTAAGTTATCTCTCACTGGCCCTATTCGCCTTAGCTAAGTT TGGCCATTTTAAGGATGTGTTTAACCGTCCACCAGCACAATGGCAAAGCCATTTGCTCACCTTGTTTGCTTGGTTATTAC TGGCATTTAGCTTAAGTGCCTGCGCGAGCGATCAAGGCTGGGCCTACGGTAGCATTTTGTTTATGGGGATCATTTCCCTC GCGGCCATGCTGGTCATACTGACGTTAAGCTACAGTCCACGCCATTTACCGATTGGTATCGTCGCTGGTAGCGTACTCAC AAGCAGTCTATTACTGAGTGCTGGGCTATAA
Upstream 100 bases:
>100_bases ATGCGCCGAATGCCAAGGCGAATAAGGCGCGCCGCAGTGAGCCAAAAACATCCCTAGCCAACGAACTTACCTCGCCGTCT TCATTGGAGGAAGCCAAATC
Downstream 100 bases:
>100_bases CTTCTCCGCACTAATCTATAACTTCCTGCCGCACTGAGCCACAGGTCATGGCTAAGTGCGCACCGCTAGGCTATAGTGCC CTGATGTCCTTCAGATAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MMPEFIPVLGILGLSYLSLALFALAKFGHFKDVFNRPPAQWQSHLLTLFAWLLLAFSLSACASDQGWAYGSILFMGIISL AAMLVILTLSYSPRHLPIGIVAGSVLTSSLLLSAGL
Sequences:
>Translated_116_residues MMPEFIPVLGILGLSYLSLALFALAKFGHFKDVFNRPPAQWQSHLLTLFAWLLLAFSLSACASDQGWAYGSILFMGIISL AAMLVILTLSYSPRHLPIGIVAGSVLTSSLLLSAGL >Mature_116_residues MMPEFIPVLGILGLSYLSLALFALAKFGHFKDVFNRPPAQWQSHLLTLFAWLLLAFSLSACASDQGWAYGSILFMGIISL AAMLVILTLSYSPRHLPIGIVAGSVLTSSLLLSAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12482; Mature: 12482
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPEFIPVLGILGLSYLSLALFALAKFGHFKDVFNRPPAQWQSHLLTLFAWLLLAFSLSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH CASDQGWAYGSILFMGIISLAAMLVILTLSYSPRHLPIGIVAGSVLTSSLLLSAGL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMPEFIPVLGILGLSYLSLALFALAKFGHFKDVFNRPPAQWQSHLLTLFAWLLLAFSLSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH CASDQGWAYGSILFMGIISLAAMLVILTLSYSPRHLPIGIVAGSVLTSSLLLSAGL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA