| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173472
Identifier: 126173472
GI number: 126173472
Start: 1420793
End: 1421230
Strand: Reverse
Name: 126173472
Synonym: Sbal_1234
Alternate gene names: NA
Gene position: 1421230-1420793 (Counterclockwise)
Preceding gene: 126173473
Following gene: 126173471
Centisome position: 27.72
GC content: 46.58
Gene sequence:
>438_bases ATGGGCTTTAACTTAACGGTTAACTGGCAAACCTCGCCCGCCGAAGAAGGCGAATTTTGTCGAGACCACAGTATTACATT TGGCAGCGGCCAGACGATTCAAGCCTCGTCGGCACCGGAATATAAAGGCAATGGGCAGAATGTAAACCCAGAGGAAAGCC TGCTAGCGGCGTTATCCTCATGTCATATGTTGACCTTTCTCGCGATTGCACATCTTAAGCGCTTACCTGTCACGTCCTAT GTGGACAATGCCACTGCAGAGCTGGGTAAAAATGAAGCAGGCAAGTTGGCCGTCACTAAGATGGTGCTGAATCCTAAGGT CATGTTTGCCGAAGGGATTGAAGTCAGCCAAGAAACCCTTGAGAAAATTCACGAAAAAGCACATGCAAATTGCTTTATCG CCAATAGTTTAGCGACAGATATTCACATCAAGTTTTAA
Upstream 100 bases:
>100_bases GCACTAATCTATAACTTCCTGCCGCACTGAGCCACAGGTCATGGCTAAGTGCGCACCGCTAGGCTATAGTGCCCTGATGT CCTTCAGATAGGAGAAAATA
Downstream 100 bases:
>100_bases GATTTGTGCTGATATCTACGGCCCGCTAATGGTTTCCCTAAGCGGGCTTTTTTATTGCCGCACCGCAGATCATTACCAGT CTGACTCATTGCCATCACCG
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; Redox Protein; OsmC/Ohr Family Protein; Osmc Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; Truncated Hemoglobin; Peroxiredoxin OsmC; Regulator Of Disulfide Bond Formation; OsmC-Family Protein Like; Stress-Induced Protein OsmC-Like Protein; OsmC-Like Family; Osmotically Inducible Protein
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MGFNLTVNWQTSPAEEGEFCRDHSITFGSGQTIQASSAPEYKGNGQNVNPEESLLAALSSCHMLTFLAIAHLKRLPVTSY VDNATAELGKNEAGKLAVTKMVLNPKVMFAEGIEVSQETLEKIHEKAHANCFIANSLATDIHIKF
Sequences:
>Translated_145_residues MGFNLTVNWQTSPAEEGEFCRDHSITFGSGQTIQASSAPEYKGNGQNVNPEESLLAALSSCHMLTFLAIAHLKRLPVTSY VDNATAELGKNEAGKLAVTKMVLNPKVMFAEGIEVSQETLEKIHEKAHANCFIANSLATDIHIKF >Mature_144_residues GFNLTVNWQTSPAEEGEFCRDHSITFGSGQTIQASSAPEYKGNGQNVNPEESLLAALSSCHMLTFLAIAHLKRLPVTSYV DNATAELGKNEAGKLAVTKMVLNPKVMFAEGIEVSQETLEKIHEKAHANCFIANSLATDIHIKF
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15764; Mature: 15633
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFNLTVNWQTSPAEEGEFCRDHSITFGSGQTIQASSAPEYKGNGQNVNPEESLLAALSS CCCEEEEEECCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHH CHMLTFLAIAHLKRLPVTSYVDNATAELGKNEAGKLAVTKMVLNPKVMFAEGIEVSQETL HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEHHCCCEEEECCCCCCHHHH EKIHEKAHANCFIANSLATDIHIKF HHHHHHHCCCEEEECCCCCEEEEEC >Mature Secondary Structure GFNLTVNWQTSPAEEGEFCRDHSITFGSGQTIQASSAPEYKGNGQNVNPEESLLAALSS CCEEEEEECCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHH CHMLTFLAIAHLKRLPVTSYVDNATAELGKNEAGKLAVTKMVLNPKVMFAEGIEVSQETL HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEHHCCCEEEECCCCCCHHHH EKIHEKAHANCFIANSLATDIHIKF HHHHHHHCCCEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA