| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126173405
Identifier: 126173405
GI number: 126173405
Start: 1345482
End: 1345862
Strand: Reverse
Name: 126173405
Synonym: Sbal_1166
Alternate gene names: NA
Gene position: 1345862-1345482 (Counterclockwise)
Preceding gene: 126173406
Following gene: 126173404
Centisome position: 26.25
GC content: 46.19
Gene sequence:
>381_bases ATGAGCAAGACTGTTAAAACCCTCGCTGAGACAGCAGCAATGACACCAGAAGCCCGTTACGATTACCTCGTTGAGCAAGT CAAAGAACATAAAGTTCTTTGGACATTACAAGACCAAGACGGTTGCGTAATGCTGACCACTGAAGAAGAAGATTGCATTC CAATGTGGCCAACCGAAGAAGCGGCTGAATCTTGGGCTGTGGATGAGTGGAGCGATTGCCAAACATTAGCGATCCCATTC GATGAGTTTCACGAAAGATGGGTGCCAGGCATGGAAGATGACGACCTGTTCGTTGCCGTTTTCCCAGTATTAGATGATTT AGGTGTGGTTATCCCACCTTATGAGTTAGATCAACGATTAGCGCCTAAGCAAAGCCATTAA
Upstream 100 bases:
>100_bases ATGTTACCATTTAGCCAACTGGTGAATTTTGCTGTGCCCTAGGTTTTTACATTAGAGACACAACAGGCTTCGCCCTATTC AAGCAAAAGAGATATTTTTC
Downstream 100 bases:
>100_bases TCTCAATCGCTAAGCGAGAATGTCTATGAGCGAGCAAGAATCGGCTATACCGACACCTAAGGCTGACGCGGCCGTGAGTT CACGTTTACCCAAACGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSKTVKTLAETAAMTPEARYDYLVEQVKEHKVLWTLQDQDGCVMLTTEEEDCIPMWPTEEAAESWAVDEWSDCQTLAIPF DEFHERWVPGMEDDDLFVAVFPVLDDLGVVIPPYELDQRLAPKQSH
Sequences:
>Translated_126_residues MSKTVKTLAETAAMTPEARYDYLVEQVKEHKVLWTLQDQDGCVMLTTEEEDCIPMWPTEEAAESWAVDEWSDCQTLAIPF DEFHERWVPGMEDDDLFVAVFPVLDDLGVVIPPYELDQRLAPKQSH >Mature_125_residues SKTVKTLAETAAMTPEARYDYLVEQVKEHKVLWTLQDQDGCVMLTTEEEDCIPMWPTEEAAESWAVDEWSDCQTLAIPFD EFHERWVPGMEDDDLFVAVFPVLDDLGVVIPPYELDQRLAPKQSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14503; Mature: 14372
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTVKTLAETAAMTPEARYDYLVEQVKEHKVLWTLQDQDGCVMLTTEEEDCIPMWPTEE CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCCCCCCCCHH AAESWAVDEWSDCQTLAIPFDEFHERWVPGMEDDDLFVAVFPVLDDLGVVIPPYELDQRL HHHHCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCEEEEHHHHHHCCCCEECCHHHHHCC APKQSH CCCCCC >Mature Secondary Structure SKTVKTLAETAAMTPEARYDYLVEQVKEHKVLWTLQDQDGCVMLTTEEEDCIPMWPTEE CHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCCCCCCCCHH AAESWAVDEWSDCQTLAIPFDEFHERWVPGMEDDDLFVAVFPVLDDLGVVIPPYELDQRL HHHHCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCEEEEHHHHHHCCCCEECCHHHHHCC APKQSH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA