| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is insG [H]
Identifier: 126173403
GI number: 126173403
Start: 1343624
End: 1344946
Strand: Direct
Name: insG [H]
Synonym: Sbal_1164
Alternate gene names: 126173403
Gene position: 1343624-1344946 (Clockwise)
Preceding gene: 126173402
Following gene: 126173409
Centisome position: 26.2
GC content: 48.22
Gene sequence:
>1323_bases ATGCAACTCTCAGAAGCACTCGCCCGCACTCATATTACCCGCCTAACTGAATTCACCTGCTTAGCTGATGTGTTAGAACC TGAGTTAATTCAATCTTGTTTGGACTCTCAGGGCGTTGCGACATTAAGACGGCGTAAATTGCCGATGGACGCGATGATTT GGGCCGTTATCGGAATGGCTTTGTTCCGAGGGGAGTCTGTTCGGTCACTCATCAACAAACTCGACATTGTTTTGCCGCAA GAGATTGATTATGTTGCACGCAGCGCCGTGACTCAGGCGCGTAAACGATTGGGCAGTGAGGTTATTCGAGAAGTGTTTAG TCGCAGCGCCAATACCTGGCACGCAAGAGCTGAACACCCTCATTGGTGCGGTCTTAACTTGTATGGTGTTGACGGTGTAG TGTGGCGGACACCCGATAGTGTCCAAAATCAAGCCGCCTTTGCGCGTACCGCAAACGCTTCAGGCGAAGCGGCTTATCCG CAAATTCGCATGGTTTGCTTGATGGAGTTAAGCAGCCATTTGTTGGTCAATAGCGCCTTTGATTCGGTTGCCGAAAATGA AATGAACTTAGCATCTCAGCTCATTCCTAGCATTCCCAATCACAGCCTAACCCTATTTGACCGAGGATTTTACTCGCTCG GCCTGTTACATGCTTGGCAGCAAGCACAACCTGATAGCCACTGGTTGTTGCCATTGAAGAAAGGCACTCAATATGAGGTG GTGCGAACATTGGGAAAACATGACCAGTGGGTGAAACTCACCACCACGCCTCTGGCCAGAAAGAAATGGCCGCAGCTCCC TGATACCCTTGAAGCGCGTTTACTCACTAAGACAGTGAAAGGTAAGTCAGTCGCCATTTTGACCTCGTTGACTGACCCGA TGCGTTACCCCAGCGAAGACATCGTCGACTTATATGGCCATCGATGGGAAATCGAACTGGGCTACAGAGAGATGAAACAA CATCTGTTGGAGAGTCGTTTTACGCTACGCAGTCAACTACCGGAGCTGGTGACTCAAGAGTTGTGGGGCGTGCTACTGGC CTATAATCTTATTAGATATAAGATGTTGCTGATGGCTAAAAGCTTGCCATCGGTCCATCCTAATCAACTGAGTTTTAGGG ATGCGGCGAGTTATATCATCTTCAAGTTGACACAACTGCCATCACAAACACCGGGGAATGTCCCGAGAGACGTATTGGAT ATAGAACGAAATGCACGGCAATTTAAGTTGGATGGTAAACGGGAAAGGGCTTATCCAAGAGTCCTTAAAATGAGCAAAAA CAAGTATCCGGTTAGACCAAAGAAAAATGCCGTTCACTCTTAA
Upstream 100 bases:
>100_bases AAGCCGTCACAATGACTAATGCCGATCAGTTAAGACAGATCGCTTGACGATCTCGCTGAAAAGATCAAAATCCGATGACT TCTTGTCATCGGATTTTTTT
Downstream 100 bases:
>100_bases GTGAACGGCATTAGTCACAATGACGGCTTTTTGTTGGGCAAAATTCAGTATGCTACGAACTTAACTCATGATGTTCAGGT TAAGCTTAGGTTTAAACCAC
Product: transposase, IS4 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MQLSEALARTHITRLTEFTCLADVLEPELIQSCLDSQGVATLRRRKLPMDAMIWAVIGMALFRGESVRSLINKLDIVLPQ EIDYVARSAVTQARKRLGSEVIREVFSRSANTWHARAEHPHWCGLNLYGVDGVVWRTPDSVQNQAAFARTANASGEAAYP QIRMVCLMELSSHLLVNSAFDSVAENEMNLASQLIPSIPNHSLTLFDRGFYSLGLLHAWQQAQPDSHWLLPLKKGTQYEV VRTLGKHDQWVKLTTTPLARKKWPQLPDTLEARLLTKTVKGKSVAILTSLTDPMRYPSEDIVDLYGHRWEIELGYREMKQ HLLESRFTLRSQLPELVTQELWGVLLAYNLIRYKMLLMAKSLPSVHPNQLSFRDAASYIIFKLTQLPSQTPGNVPRDVLD IERNARQFKLDGKRERAYPRVLKMSKNKYPVRPKKNAVHS
Sequences:
>Translated_440_residues MQLSEALARTHITRLTEFTCLADVLEPELIQSCLDSQGVATLRRRKLPMDAMIWAVIGMALFRGESVRSLINKLDIVLPQ EIDYVARSAVTQARKRLGSEVIREVFSRSANTWHARAEHPHWCGLNLYGVDGVVWRTPDSVQNQAAFARTANASGEAAYP QIRMVCLMELSSHLLVNSAFDSVAENEMNLASQLIPSIPNHSLTLFDRGFYSLGLLHAWQQAQPDSHWLLPLKKGTQYEV VRTLGKHDQWVKLTTTPLARKKWPQLPDTLEARLLTKTVKGKSVAILTSLTDPMRYPSEDIVDLYGHRWEIELGYREMKQ HLLESRFTLRSQLPELVTQELWGVLLAYNLIRYKMLLMAKSLPSVHPNQLSFRDAASYIIFKLTQLPSQTPGNVPRDVLD IERNARQFKLDGKRERAYPRVLKMSKNKYPVRPKKNAVHS >Mature_440_residues MQLSEALARTHITRLTEFTCLADVLEPELIQSCLDSQGVATLRRRKLPMDAMIWAVIGMALFRGESVRSLINKLDIVLPQ EIDYVARSAVTQARKRLGSEVIREVFSRSANTWHARAEHPHWCGLNLYGVDGVVWRTPDSVQNQAAFARTANASGEAAYP QIRMVCLMELSSHLLVNSAFDSVAENEMNLASQLIPSIPNHSLTLFDRGFYSLGLLHAWQQAQPDSHWLLPLKKGTQYEV VRTLGKHDQWVKLTTTPLARKKWPQLPDTLEARLLTKTVKGKSVAILTSLTDPMRYPSEDIVDLYGHRWEIELGYREMKQ HLLESRFTLRSQLPELVTQELWGVLLAYNLIRYKMLLMAKSLPSVHPNQLSFRDAASYIIFKLTQLPSQTPGNVPRDVLD IERNARQFKLDGKRERAYPRVLKMSKNKYPVRPKKNAVHS
Specific function: Involved in the transposition of the insertion sequence IS4 [H]
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1790729, Length=419, Percent_Identity=53.2219570405728, Blast_Score=469, Evalue=1e-133,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 50211; Mature: 50211
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSEALARTHITRLTEFTCLADVLEPELIQSCLDSQGVATLRRRKLPMDAMIWAVIGMA CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHH LFRGESVRSLINKLDIVLPQEIDYVARSAVTQARKRLGSEVIREVFSRSANTWHARAEHP HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC HWCGLNLYGVDGVVWRTPDSVQNQAAFARTANASGEAAYPQIRMVCLMELSSHLLVNSAF CCCCCEEECCCEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DSVAENEMNLASQLIPSIPNHSLTLFDRGFYSLGLLHAWQQAQPDSHWLLPLKKGTQYEV HHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH VRTLGKHDQWVKLTTTPLARKKWPQLPDTLEARLLTKTVKGKSVAILTSLTDPMRYPSED HHHHCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHH IVDLYGHRWEIELGYREMKQHLLESRFTLRSQLPELVTQELWGVLLAYNLIRYKMLLMAK HHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLPSVHPNQLSFRDAASYIIFKLTQLPSQTPGNVPRDVLDIERNARQFKLDGKRERAYPR HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHEECCCCHHHHHHH VLKMSKNKYPVRPKKNAVHS HHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MQLSEALARTHITRLTEFTCLADVLEPELIQSCLDSQGVATLRRRKLPMDAMIWAVIGMA CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHH LFRGESVRSLINKLDIVLPQEIDYVARSAVTQARKRLGSEVIREVFSRSANTWHARAEHP HHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC HWCGLNLYGVDGVVWRTPDSVQNQAAFARTANASGEAAYPQIRMVCLMELSSHLLVNSAF CCCCCEEECCCEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DSVAENEMNLASQLIPSIPNHSLTLFDRGFYSLGLLHAWQQAQPDSHWLLPLKKGTQYEV HHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH VRTLGKHDQWVKLTTTPLARKKWPQLPDTLEARLLTKTVKGKSVAILTSLTDPMRYPSED HHHHCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHH IVDLYGHRWEIELGYREMKQHLLESRFTLRSQLPELVTQELWGVLLAYNLIRYKMLLMAK HHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLPSVHPNQLSFRDAASYIIFKLTQLPSQTPGNVPRDVLDIERNARQFKLDGKRERAYPR HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHEECCCCHHHHHHH VLKMSKNKYPVRPKKNAVHS HHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6268937; 7610040; 9278503 [H]