| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173323
Identifier: 126173323
GI number: 126173323
Start: 1241952
End: 1242869
Strand: Reverse
Name: 126173323
Synonym: Sbal_1080
Alternate gene names: NA
Gene position: 1242869-1241952 (Counterclockwise)
Preceding gene: 126173331
Following gene: 126173322
Centisome position: 24.24
GC content: 44.66
Gene sequence:
>918_bases ATGAGTCCCCTTAACACATTAGTGCCCAGTAATACCCAATCTGCTCCGCGCTTAACTCGGCACTACCGAAACCTCAGTTT GATATTGCTACTTTGTGGAGCTTGGTTATTTTGGGCGAGCCATTTTCATTCGCCATTTGATCTTATCCAAGAATATGGCC GCTTTATTTTTCTGGGTATTACAGGAGCGATATTTGCCAATTCGACAGGAGCTGGCGGTGGCGTCATCTTTATTCCTGTT TTTTCGAGCCTCAACTTTAGTGAGTCTCAAAGTGTTGCGACTTCATTTATGATCCAATGCTTTGGTATGACAGCAGGCGC GATTTCATGGTCACTGTATTATAAAAAGCGCCACCTAGAAGATGCCGCCTGGTCTGGTTTTGTGAAAGCAGCATTACTTG CCGCCTTCTTTTCTGTCTTAGGTTTCTGGAGTAGTCAATTACTACAACTCAACTCCCCCTCTTCGCTACACACAAGTTTC AGCATCTTCTCGATTGTACTCGGTATCGCCATCGTTATTAGTAGCAAAAGTAGCACGCCAATAACTCGCGCTATAATGCC AGTCGATTTTCTTTGGCTCGCTCTCATTGGCTATTTCGGCGGCATTATCACAGCTTGGTTATCGGTAGGCGTCGGTGAAT TAGTCGTCATTTATCTGATGTTACGGGGACTATGCACCAAAATGGCGATCGCCACCGGCGTCATTGTCTCTGCAATTACA GTTTGGTCGGCAAGCCCTATTCATATTTTTTCAACAAATAGCCATGCCCTCTTTGAGTTAGTGTTATTCGCAGGCCCAGG TGCCGTCATCGGAGGATTACTCGCTCGTAAATTAGCGCTATATCTCCCAGTAAAAGTATTAAAACTTTTTTTCTCCATTT GGATAATTTTGACGGGTAGCGTCATGTTGGCGAGTTAA
Upstream 100 bases:
>100_bases ATTACTTAAAATGTTTAATTTATTTATTCAAGCTTATGTGACAACGTTGTCTTTCATTGGTAACATGGCGATAACATGAC AAAGATCACGGTAGCTATCG
Downstream 100 bases:
>100_bases TAGGAAGCATTAAGATGAATAATTCTCCGCTAAAAAGTATCACTATTGTCGGTGGCGGTAGCACAGGTTGGATGACGGCT CTCTACTTGAGTAAGTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSPLNTLVPSNTQSAPRLTRHYRNLSLILLLCGAWLFWASHFHSPFDLIQEYGRFIFLGITGAIFANSTGAGGGVIFIPV FSSLNFSESQSVATSFMIQCFGMTAGAISWSLYYKKRHLEDAAWSGFVKAALLAAFFSVLGFWSSQLLQLNSPSSLHTSF SIFSIVLGIAIVISSKSSTPITRAIMPVDFLWLALIGYFGGIITAWLSVGVGELVVIYLMLRGLCTKMAIATGVIVSAIT VWSASPIHIFSTNSHALFELVLFAGPGAVIGGLLARKLALYLPVKVLKLFFSIWIILTGSVMLAS
Sequences:
>Translated_305_residues MSPLNTLVPSNTQSAPRLTRHYRNLSLILLLCGAWLFWASHFHSPFDLIQEYGRFIFLGITGAIFANSTGAGGGVIFIPV FSSLNFSESQSVATSFMIQCFGMTAGAISWSLYYKKRHLEDAAWSGFVKAALLAAFFSVLGFWSSQLLQLNSPSSLHTSF SIFSIVLGIAIVISSKSSTPITRAIMPVDFLWLALIGYFGGIITAWLSVGVGELVVIYLMLRGLCTKMAIATGVIVSAIT VWSASPIHIFSTNSHALFELVLFAGPGAVIGGLLARKLALYLPVKVLKLFFSIWIILTGSVMLAS >Mature_304_residues SPLNTLVPSNTQSAPRLTRHYRNLSLILLLCGAWLFWASHFHSPFDLIQEYGRFIFLGITGAIFANSTGAGGGVIFIPVF SSLNFSESQSVATSFMIQCFGMTAGAISWSLYYKKRHLEDAAWSGFVKAALLAAFFSVLGFWSSQLLQLNSPSSLHTSFS IFSIVLGIAIVISSKSSTPITRAIMPVDFLWLALIGYFGGIITAWLSVGVGELVVIYLMLRGLCTKMAIATGVIVSAITV WSASPIHIFSTNSHALFELVLFAGPGAVIGGLLARKLALYLPVKVLKLFFSIWIILTGSVMLAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32988; Mature: 32857
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLNTLVPSNTQSAPRLTRHYRNLSLILLLCGAWLFWASHFHSPFDLIQEYGRFIFLGI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEE TGAIFANSTGAGGGVIFIPVFSSLNFSESQSVATSFMIQCFGMTAGAISWSLYYKKRHLE HHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH DAAWSGFVKAALLAAFFSVLGFWSSQLLQLNSPSSLHTSFSIFSIVLGIAIVISSKSSTP HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCC ITRAIMPVDFLWLALIGYFGGIITAWLSVGVGELVVIYLMLRGLCTKMAIATGVIVSAIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWSASPIHIFSTNSHALFELVLFAGPGAVIGGLLARKLALYLPVKVLKLFFSIWIILTGS HHCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VMLAS HHCCC >Mature Secondary Structure SPLNTLVPSNTQSAPRLTRHYRNLSLILLLCGAWLFWASHFHSPFDLIQEYGRFIFLGI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEE TGAIFANSTGAGGGVIFIPVFSSLNFSESQSVATSFMIQCFGMTAGAISWSLYYKKRHLE HHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH DAAWSGFVKAALLAAFFSVLGFWSSQLLQLNSPSSLHTSFSIFSIVLGIAIVISSKSSTP HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCC ITRAIMPVDFLWLALIGYFGGIITAWLSVGVGELVVIYLMLRGLCTKMAIATGVIVSAIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWSASPIHIFSTNSHALFELVLFAGPGAVIGGLLARKLALYLPVKVLKLFFSIWIILTGS HHCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VMLAS HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA