| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173322
Identifier: 126173322
GI number: 126173322
Start: 1240411
End: 1241937
Strand: Reverse
Name: 126173322
Synonym: Sbal_1079
Alternate gene names: NA
Gene position: 1241937-1240411 (Counterclockwise)
Preceding gene: 126173323
Following gene: 126173317
Centisome position: 24.22
GC content: 38.77
Gene sequence:
>1527_bases ATGAATAATTCTCCGCTAAAAAGTATCACTATTGTCGGTGGCGGTAGCACAGGTTGGATGACGGCTCTCTACTTGAGTAA GTTATATAACCATTCGTCTAATATCATTGATATTAGACTTATCGAAAGTAAAGAAATTGGTATTATTGGCGTTGGTGAAG CTACCGTTCATAGTCTACGATTCTTCTTTGCAGCTATGGGATTAGATGAAAATGAACTACTTAGAGAAACTAACGCAACA TTAAAGACCGGCATATTATTTCGTAACTGGATGAAACCAGTCGATGGTAAAATGCATGAATATTTCCATCCATTTGAGCA ACAAAAACCATCTGGAAAAATTGATAATGCAAGTGCTTGGATTTTAAATAATCAGATTAATGAATCAAACAGCACTCCCT TTGCTGAAGCAACAAGTCTTTCATTTAGCTTAATGCAAAATAACTTAAGCCCTAAAACGCATTACTTGAATCAATATCAA GGTATTGTCCCCTATGGTTACCACTTAGACGCGACGCTCATGGCGGCCTTTTTAAAGCGTAAAGCCACCCAAGCAGGTGT AGAGCATATTGAAGCAAATGTAACGGACGTTCTGGTTAATGATGGCAACATCACTGAGGTTGTAACTGACCTAGGCTCAT TCAAGAGCGACATATTTATCGACTGCACAGGCTTTAAAGGGCTTTTAATTCAAAGCCTAAAGAATGATAACTGGCAATCA TTCGAAACTGAATTACCTTGCAATAAAGCCGTTGCAATGCAGCGGGAATATCTGCCTCACCAGCTACCAAGAGCCTATAC GACAGCAACAGCGCTTAGTCATGGTTGGGTTTGGGAAATTGACCTAACGAATCGTCAAGGAACGGGTTATGTCTACGATG GCAATAGTCTAACGAGGGAGCAAGCTGAGGCTGAATTAAAAGCTTATCTTGGCGATGAACAAGAGATCATAAGAACTGTT CACTTAGATATGAAGATAGGTTGTAGACGTGAATTTTGGGTTGGAAATTGTATTGCAATGGGGCTCGCAGGTGGATTTAT TGAGCCCTTAGAATCGACAGGCTTGCATCTTATAAACTTGGGGGCAAGATTGCTAGCGACGCATTTAACGTCATCAAATC CCTCCCAAGCAATAAGGACGTCATATAATACCGCAATGAAAGGCTTGTATACCGATCTTAGACAGTTTATCGTACTTCAT TACTGCTTAACTGATAGAGATGATAATGAATTTTGGCAAAAAGCCGCACAAAGCTCAGCATTCATCCCTGCTCTAGAACA AAAAATGACACTATGGAAAGACAAGGTTTGTGAGTATGTCGATCTTGCCAATGGATATAGTTCAGTTTTTACAGATGAGA ATTATCGCTACGTACTTTATGGTATGCAGCATATTCCTGAAATCCATATACCTTGTCCCAAAACTGAAATATCAAGAATA CTCGACAACTTAAAAACACAACAGTTTAGAGCCAAAGAGCAATCTTTATCACATCAAGAATTTTTAGCAAAAATTAAAAA ATTTTAA
Upstream 100 bases:
>100_bases TAGCGCTATATCTCCCAGTAAAAGTATTAAAACTTTTTTTCTCCATTTGGATAATTTTGACGGGTAGCGTCATGTTGGCG AGTTAATAGGAAGCATTAAG
Downstream 100 bases:
>100_bases AACAATAAAGAGCAAGATTAACAATCGTGCTCTACATGCCGTTTAATTAAACCATTAATTAAGTTGGATGCCATACAACT TGATGCGTTCAATTAACTCC
Product: tryptophan halogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MNNSPLKSITIVGGGSTGWMTALYLSKLYNHSSNIIDIRLIESKEIGIIGVGEATVHSLRFFFAAMGLDENELLRETNAT LKTGILFRNWMKPVDGKMHEYFHPFEQQKPSGKIDNASAWILNNQINESNSTPFAEATSLSFSLMQNNLSPKTHYLNQYQ GIVPYGYHLDATLMAAFLKRKATQAGVEHIEANVTDVLVNDGNITEVVTDLGSFKSDIFIDCTGFKGLLIQSLKNDNWQS FETELPCNKAVAMQREYLPHQLPRAYTTATALSHGWVWEIDLTNRQGTGYVYDGNSLTREQAEAELKAYLGDEQEIIRTV HLDMKIGCRREFWVGNCIAMGLAGGFIEPLESTGLHLINLGARLLATHLTSSNPSQAIRTSYNTAMKGLYTDLRQFIVLH YCLTDRDDNEFWQKAAQSSAFIPALEQKMTLWKDKVCEYVDLANGYSSVFTDENYRYVLYGMQHIPEIHIPCPKTEISRI LDNLKTQQFRAKEQSLSHQEFLAKIKKF
Sequences:
>Translated_508_residues MNNSPLKSITIVGGGSTGWMTALYLSKLYNHSSNIIDIRLIESKEIGIIGVGEATVHSLRFFFAAMGLDENELLRETNAT LKTGILFRNWMKPVDGKMHEYFHPFEQQKPSGKIDNASAWILNNQINESNSTPFAEATSLSFSLMQNNLSPKTHYLNQYQ GIVPYGYHLDATLMAAFLKRKATQAGVEHIEANVTDVLVNDGNITEVVTDLGSFKSDIFIDCTGFKGLLIQSLKNDNWQS FETELPCNKAVAMQREYLPHQLPRAYTTATALSHGWVWEIDLTNRQGTGYVYDGNSLTREQAEAELKAYLGDEQEIIRTV HLDMKIGCRREFWVGNCIAMGLAGGFIEPLESTGLHLINLGARLLATHLTSSNPSQAIRTSYNTAMKGLYTDLRQFIVLH YCLTDRDDNEFWQKAAQSSAFIPALEQKMTLWKDKVCEYVDLANGYSSVFTDENYRYVLYGMQHIPEIHIPCPKTEISRI LDNLKTQQFRAKEQSLSHQEFLAKIKKF >Mature_508_residues MNNSPLKSITIVGGGSTGWMTALYLSKLYNHSSNIIDIRLIESKEIGIIGVGEATVHSLRFFFAAMGLDENELLRETNAT LKTGILFRNWMKPVDGKMHEYFHPFEQQKPSGKIDNASAWILNNQINESNSTPFAEATSLSFSLMQNNLSPKTHYLNQYQ GIVPYGYHLDATLMAAFLKRKATQAGVEHIEANVTDVLVNDGNITEVVTDLGSFKSDIFIDCTGFKGLLIQSLKNDNWQS FETELPCNKAVAMQREYLPHQLPRAYTTATALSHGWVWEIDLTNRQGTGYVYDGNSLTREQAEAELKAYLGDEQEIIRTV HLDMKIGCRREFWVGNCIAMGLAGGFIEPLESTGLHLINLGARLLATHLTSSNPSQAIRTSYNTAMKGLYTDLRQFIVLH YCLTDRDDNEFWQKAAQSSAFIPALEQKMTLWKDKVCEYVDLANGYSSVFTDENYRYVLYGMQHIPEIHIPCPKTEISRI LDNLKTQQFRAKEQSLSHQEFLAKIKKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006905 [H]
Pfam domain/function: PF04820 Trp_halogenase [H]
EC number: NA
Molecular weight: Translated: 57429; Mature: 57429
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSPLKSITIVGGGSTGWMTALYLSKLYNHSSNIIDIRLIESKEIGIIGVGEATVHSLR CCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCHHHHHHHH FFFAAMGLDENELLRETNATLKTGILFRNWMKPVDGKMHEYFHPFEQQKPSGKIDNASAW HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCCHHHCCCCCCCCCCEEE ILNNQINESNSTPFAEATSLSFSLMQNNLSPKTHYLNQYQGIVPYGYHLDATLMAAFLKR EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHH KATQAGVEHIEANVTDVLVNDGNITEVVTDLGSFKSDIFIDCTGFKGLLIQSLKNDNWQS HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCC FETELPCNKAVAMQREYLPHQLPRAYTTATALSHGWVWEIDLTNRQGTGYVYDGNSLTRE CCCCCCCCHHHHHHHHHCHHHCCHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCHH QAEAELKAYLGDEQEIIRTVHLDMKIGCRREFWVGNCIAMGLAGGFIEPLESTGLHLINL HHHHHHHHHHCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCCCCHHHHCCCEEEHH GARLLATHLTSSNPSQAIRTSYNTAMKGLYTDLRQFIVLHYCLTDRDDNEFWQKAAQSSA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC FIPALEQKMTLWKDKVCEYVDLANGYSSVFTDENYRYVLYGMQHIPEIHIPCPKTEISRI CCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEHHHCCEEECCCCHHHHHHH LDNLKTQQFRAKEQSLSHQEFLAKIKKF HHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MNNSPLKSITIVGGGSTGWMTALYLSKLYNHSSNIIDIRLIESKEIGIIGVGEATVHSLR CCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCHHHHHHHH FFFAAMGLDENELLRETNATLKTGILFRNWMKPVDGKMHEYFHPFEQQKPSGKIDNASAW HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCCHHHCCCCCCCCCCEEE ILNNQINESNSTPFAEATSLSFSLMQNNLSPKTHYLNQYQGIVPYGYHLDATLMAAFLKR EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHH KATQAGVEHIEANVTDVLVNDGNITEVVTDLGSFKSDIFIDCTGFKGLLIQSLKNDNWQS HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCC FETELPCNKAVAMQREYLPHQLPRAYTTATALSHGWVWEIDLTNRQGTGYVYDGNSLTRE CCCCCCCCHHHHHHHHHCHHHCCHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCHH QAEAELKAYLGDEQEIIRTVHLDMKIGCRREFWVGNCIAMGLAGGFIEPLESTGLHLINL HHHHHHHHHHCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCCCCHHHHCCCEEEHH GARLLATHLTSSNPSQAIRTSYNTAMKGLYTDLRQFIVLHYCLTDRDDNEFWQKAAQSSA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC FIPALEQKMTLWKDKVCEYVDLANGYSSVFTDENYRYVLYGMQHIPEIHIPCPKTEISRI CCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEHHHCCEEECCCCHHHHHHH LDNLKTQQFRAKEQSLSHQEFLAKIKKF HHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]