Click here to switch to the map view.

The map label for this gene is yfiH [H]

Identifier: 126173262

GI number: 126173262

Start: 1163108

End: 1163842

Strand: Direct

Name: yfiH [H]

Synonym: Sbal_1018

Alternate gene names: 126173262

Gene position: 1163108-1163842 (Clockwise)

Preceding gene: 126173261

Following gene: 126173263

Centisome position: 22.68

GC content: 49.93

Gene sequence:

>735_bases
GTGTTTGATCACGATTGGCCTGTTCCTGCTAATGTTGGCATCGCTATGACAAATCGTCATGGCGGTGTGAGCGTGCATCC
CTATGACAGTTTGAATCTTGGACTGCATGTCGGTGATGCTGAACAGCAGGTGATGGCTAATCGTGAATTACTCTGCAAAC
AATTAGCGTTAACTGCCGATCCTGTCTGGCTTGAGCAAGTCCATGGTACCCATGTGCTCAATTTAGACACGCTGAGCTTA
GCTCAGACAGCGGGTATGCCGATTGCCGATGCCAGTTATAGCCGAACTGCGAGCCAAGTTTGCGCTGTAATGACCGCCGA
TTGTTTACCTGTATTGCTGTGTAATCAAGCGGGAACCGAAGTGGCTGCGGCCCATGCCGGTTGGCGCGGTTTATGTGATG
GCGTGATTGAGGCCACCGCGGCGCAGTTTAGTTCTCCTATGGATGAGTTGATTGCTTACCTAGGCCCGGCTATTGGTCCG
CAAAAATTTGAAGTCGGCGTCGAAGTCAAGCATGCATTCTGTGGGTTACATCCACAGGCGGCAGCGTGTTTTATTCCCAG
TGGTGACAAGTATCTGGCCGATATTATTGGCTTGGCTAAATTACGCTTGAGTTTACTCGGCATCAAGCATATTTATAGCG
CCGATATCTGCACTGTCAGTGACACTGATTACTTCTCTTATCGTCGCGATAAGGTGACGGGGCGCATGGCATCGTTGATC
TGGCTTAAGTCTTAA

Upstream 100 bases:

>100_bases
TGAAATCATGAGCTGGCAAGCGCCAATTCCTGAAGACATGGTGATTTTGACTAAAGCACTGCGTCAAGACACGGTAGAGC
ATCCGATCGAGTATCTCTAA

Downstream 100 bases:

>100_bases
GTTAATTCCCCTACAATTTATATTTATTTCCGCGTTATCCGCTTGAATTTGGCTAAATAGCCCCCATCTTTTAACTAACG
AAATGTAATACCAATCCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MFDHDWPVPANVGIAMTNRHGGVSVHPYDSLNLGLHVGDAEQQVMANRELLCKQLALTADPVWLEQVHGTHVLNLDTLSL
AQTAGMPIADASYSRTASQVCAVMTADCLPVLLCNQAGTEVAAAHAGWRGLCDGVIEATAAQFSSPMDELIAYLGPAIGP
QKFEVGVEVKHAFCGLHPQAAACFIPSGDKYLADIIGLAKLRLSLLGIKHIYSADICTVSDTDYFSYRRDKVTGRMASLI
WLKS

Sequences:

>Translated_244_residues
MFDHDWPVPANVGIAMTNRHGGVSVHPYDSLNLGLHVGDAEQQVMANRELLCKQLALTADPVWLEQVHGTHVLNLDTLSL
AQTAGMPIADASYSRTASQVCAVMTADCLPVLLCNQAGTEVAAAHAGWRGLCDGVIEATAAQFSSPMDELIAYLGPAIGP
QKFEVGVEVKHAFCGLHPQAAACFIPSGDKYLADIIGLAKLRLSLLGIKHIYSADICTVSDTDYFSYRRDKVTGRMASLI
WLKS
>Mature_244_residues
MFDHDWPVPANVGIAMTNRHGGVSVHPYDSLNLGLHVGDAEQQVMANRELLCKQLALTADPVWLEQVHGTHVLNLDTLSL
AQTAGMPIADASYSRTASQVCAVMTADCLPVLLCNQAGTEVAAAHAGWRGLCDGVIEATAAQFSSPMDELIAYLGPAIGP
QKFEVGVEVKHAFCGLHPQAAACFIPSGDKYLADIIGLAKLRLSLLGIKHIYSADICTVSDTDYFSYRRDKVTGRMASLI
WLKS

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=238, Percent_Identity=56.3025210084034, Blast_Score=263, Evalue=5e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26190; Mature: 26190

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDHDWPVPANVGIAMTNRHGGVSVHPYDSLNLGLHVGDAEQQVMANRELLCKQLALTAD
CCCCCCCCCCCCCEEEECCCCCEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCC
PVWLEQVHGTHVLNLDTLSLAQTAGMPIADASYSRTASQVCAVMTADCLPVLLCNQAGTE
CHHHHHHCCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VAAAHAGWRGLCDGVIEATAAQFSSPMDELIAYLGPAIGPQKFEVGVEVKHAFCGLHPQA
HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECEEEEHHHHCCCCCC
AACFIPSGDKYLADIIGLAKLRLSLLGIKHIYSADICTVSDTDYFSYRRDKVTGRMASLI
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHEE
WLKS
EECC
>Mature Secondary Structure
MFDHDWPVPANVGIAMTNRHGGVSVHPYDSLNLGLHVGDAEQQVMANRELLCKQLALTAD
CCCCCCCCCCCCCEEEECCCCCEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCC
PVWLEQVHGTHVLNLDTLSLAQTAGMPIADASYSRTASQVCAVMTADCLPVLLCNQAGTE
CHHHHHHCCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VAAAHAGWRGLCDGVIEATAAQFSSPMDELIAYLGPAIGPQKFEVGVEVKHAFCGLHPQA
HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECEEEEHHHHCCCCCC
AACFIPSGDKYLADIIGLAKLRLSLLGIKHIYSADICTVSDTDYFSYRRDKVTGRMASLI
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHEE
WLKS
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1906060; 9205837; 9278503; 2066329 [H]