| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is ydhL [H]
Identifier: 126173244
GI number: 126173244
Start: 1146537
End: 1146842
Strand: Direct
Name: ydhL [H]
Synonym: Sbal_1000
Alternate gene names: 126173244
Gene position: 1146537-1146842 (Clockwise)
Preceding gene: 126173242
Following gene: 126173250
Centisome position: 22.36
GC content: 50.0
Gene sequence:
>306_bases ATGGAACAGTTAGCCTTTTTTGATATCCCCAGTCCCTGTATCGGTGTGTGTGCCACCGATGCGCGCGGTTACTGTAATGG TTGCCTGCGAAGCCGTGACGAAAGATTCAATTGGTTAACGTTTTCAGATGCGCAAAAGTACGATGTCATTCGGCTGTGCA CTCAACGTAAACGCCGTCGCCAGTTGGCGATGATGAAAGCAAGGCAAGCGCAAATTGAGCAAGAAAGGGCGGCGTTAAAT CCGCAGTTGAATTTTGAGCCTGAGCCCGAAGCCGATCTGGATTTTGGTGGCTTCGAGCTAGACTAA
Upstream 100 bases:
>100_bases TTCTGCAGCTTCGTTTTGGGCACGGGTCGTTTAACCATGGTTCATCTGAGCATGCTTCATTTGAGAACAGCTCATTTTGA CAGAGGAATAGCGGCGGGTT
Downstream 100 bases:
>100_bases GTTGTTGAATAATTTGTGAAATATTCTTGTTTAACTGACTTGTTTAACTGATTTGTTTAACTGACTTGTTTTATTGGCTT GTAGAATTAGCGCGTTAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MEQLAFFDIPSPCIGVCATDARGYCNGCLRSRDERFNWLTFSDAQKYDVIRLCTQRKRRRQLAMMKARQAQIEQERAALN PQLNFEPEPEADLDFGGFELD
Sequences:
>Translated_101_residues MEQLAFFDIPSPCIGVCATDARGYCNGCLRSRDERFNWLTFSDAQKYDVIRLCTQRKRRRQLAMMKARQAQIEQERAALN PQLNFEPEPEADLDFGGFELD >Mature_101_residues MEQLAFFDIPSPCIGVCATDARGYCNGCLRSRDERFNWLTFSDAQKYDVIRLCTQRKRRRQLAMMKARQAQIEQERAALN PQLNFEPEPEADLDFGGFELD
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081952, Length=73, Percent_Identity=53.4246575342466, Blast_Score=83, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010710 [H]
Pfam domain/function: PF06945 DUF1289 [H]
EC number: NA
Molecular weight: Translated: 11723; Mature: 11723
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLAFFDIPSPCIGVCATDARGYCNGCLRSRDERFNWLTFSDAQKYDVIRLCTQRKRRR CCCCCCCCCCCHHHHEECCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHH QLAMMKARQAQIEQERAALNPQLNFEPEPEADLDFGGFELD HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure MEQLAFFDIPSPCIGVCATDARGYCNGCLRSRDERFNWLTFSDAQKYDVIRLCTQRKRRR CCCCCCCCCCCHHHHEECCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHH QLAMMKARQAQIEQERAALNPQLNFEPEPEADLDFGGFELD HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]