BacMap

Definition	Shewanella baltica OS155 chromosome, complete genome.
Accession	NC_009052
Length	5,127,376

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The map label for this gene is hflB [C]

Identifier: 126173236

GI number: 126173236

Start: 1138826

End: 1140337

Strand: Direct

Name: hflB [C]

Synonym: Sbal_0992

Alternate gene names: 126173236

Gene position: 1138826-1140337 (Clockwise)

Preceding gene: 126173235

Following gene: 126173242

Centisome position: 22.21

GC content: 48.94

Gene sequence:

>1512_bases
ATGCAAGATATTCGCGATTTAACCTCAGTGCTGCGCTCCAATACGCCGATCGTAGTGATTGAAACCTATGAAGAATATCG
CGTGGTCGAGTTACTTAAACGGGTCGCCAGTGTGCTTTATCAACCTGTGTTTACTTGGAGTATTACCCAAGGTTTAGCAC
GGGTCGATAAACCTATGGCGGCGCAAAAGTTTAATAGCGAACCCACAGATCTACTCGGGCAAATTAAATCAACCTCGCAA
CAGGGGATTTATGTGCTGTGCGACTTTCATCCCTTTGTGATTGATGCGCCAAAGAATGTCCGTTTACTCAAAGAAATCGC
CCTCGAATACGAGACACTGCAACACACATTAGTGCTGGTGAGCCATGCCTTTGATATCCCCCCCGAAATCAAACGTTATT
GCGCCTATTTTCAATTAACCTTGCCAAGTACAGTGCAATTGCAAAACCTGATTTACCTTGAGGTCGATAAAATTCGTCAC
CAAGGCACGCCGTTATTGGTCGATGATACCGCTGTGGTCAAATTGGCGGAGAATCTGCGGGGCGTGACTTTAGACGATGC
CCGCCGTCTGGTACGCAAAGCCATAGTCGATGATGGTGCTATTACCTTGTCTGATATTGATGCTATCAATAAAGCTAAGT
TTCAGTTACTCGACTTAAATGGCGTGCTGCAATTTGAATACGACACCAGTGATTTCTCGCAGGTCGCTGGGCTGCATAAT
CTTAAAAAATGGCTCAAGCAGCGCGCGCCTATAGCGGCTGTCAGCACCCTTGACCAAGCCGATAAGCCGACTTCTGTTCA
GCACGTTAAAGCGCTCGATGCGCCCAAGGGGATTTTACTGCTCGGCGTTCAGGGCAGTGGTAAGAGCCTCGCAGCTAAGG
CCGTTGCGGGCGTTTGGCAGCGACCTTTGCTCAGGCTCGATATGGCTGCCTTATATAACAAATACATAGGTGAAACTGAG
AAGAACCTACGTAATGCACTGGATCTTGCCGACATGATGTCGCCCTGCGTGCTTTGGATCGATGAAATTGAAAAAGGCTT
AAGCGGCAGTAGCAGCGATGAGGGCACCTCGACGCGTATTCTCGGCACCTTACTCACTTGGATGGCGGAGCGTAAATCTG
AAGTGTTTGTGGTGGCGACCGCCAATGACATTCAAGCTCTGCCGCCAGAATTGATGCGAAAGGGCAGGATGGATGAAATC
TTCTTTGTCGATTTACCCGACGAAGCCATACGCAAAGCCATCTTCTTAATCCACTGTCAGCGCCGTGGAATCGATGTGGC
GAGCTTAGATCTCGCCCAATTATCGGCCCGCAGCCAAGGATTTTCTGGCGCCGAAATCGAACAAGCGGTTATTGCTGCCA
TGTATACCGCAAGAAGCGTTGAGCGCAGTGTTGATCAAGTGTTACTACTCGAAGAACTCAGTAAAACTCGGCCTTTATCT
GTGGTCATGAGCGATAAAATCAATGCGCTACGACAATGGGCCGCAAGCCGAACCGTGAATGCCCATGAGTAA

Upstream 100 bases:

>100_bases
TGAGTACTTTGTTCAGTTCTGTGCAAAGGTTGGTATAAAGTCCAGTTCGCTGGACTTTTTTGTGGCAATTTTTAGGTTAG
TTAAAAGGGATGTGAACGAC

Downstream 100 bases:

>100_bases
GATTTCTGCTTCATGCCATGAGTTCTAGCTAGATCCGGCTGACGGCTTTAGCGGTATCTTGGGCCTCTTCATTACTGCTA
GCATCGAAATCAAAGCTGTC

Product: ATPase central domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MQDIRDLTSVLRSNTPIVVIETYEEYRVVELLKRVASVLYQPVFTWSITQGLARVDKPMAAQKFNSEPTDLLGQIKSTSQ
QGIYVLCDFHPFVIDAPKNVRLLKEIALEYETLQHTLVLVSHAFDIPPEIKRYCAYFQLTLPSTVQLQNLIYLEVDKIRH
QGTPLLVDDTAVVKLAENLRGVTLDDARRLVRKAIVDDGAITLSDIDAINKAKFQLLDLNGVLQFEYDTSDFSQVAGLHN
LKKWLKQRAPIAAVSTLDQADKPTSVQHVKALDAPKGILLLGVQGSGKSLAAKAVAGVWQRPLLRLDMAALYNKYIGETE
KNLRNALDLADMMSPCVLWIDEIEKGLSGSSSDEGTSTRILGTLLTWMAERKSEVFVVATANDIQALPPELMRKGRMDEI
FFVDLPDEAIRKAIFLIHCQRRGIDVASLDLAQLSARSQGFSGAEIEQAVIAAMYTARSVERSVDQVLLLEELSKTRPLS
VVMSDKINALRQWAASRTVNAHE

Sequences:

>Translated_503_residues
MQDIRDLTSVLRSNTPIVVIETYEEYRVVELLKRVASVLYQPVFTWSITQGLARVDKPMAAQKFNSEPTDLLGQIKSTSQ
QGIYVLCDFHPFVIDAPKNVRLLKEIALEYETLQHTLVLVSHAFDIPPEIKRYCAYFQLTLPSTVQLQNLIYLEVDKIRH
QGTPLLVDDTAVVKLAENLRGVTLDDARRLVRKAIVDDGAITLSDIDAINKAKFQLLDLNGVLQFEYDTSDFSQVAGLHN
LKKWLKQRAPIAAVSTLDQADKPTSVQHVKALDAPKGILLLGVQGSGKSLAAKAVAGVWQRPLLRLDMAALYNKYIGETE
KNLRNALDLADMMSPCVLWIDEIEKGLSGSSSDEGTSTRILGTLLTWMAERKSEVFVVATANDIQALPPELMRKGRMDEI
FFVDLPDEAIRKAIFLIHCQRRGIDVASLDLAQLSARSQGFSGAEIEQAVIAAMYTARSVERSVDQVLLLEELSKTRPLS
VVMSDKINALRQWAASRTVNAHE
>Mature_503_residues
MQDIRDLTSVLRSNTPIVVIETYEEYRVVELLKRVASVLYQPVFTWSITQGLARVDKPMAAQKFNSEPTDLLGQIKSTSQ
QGIYVLCDFHPFVIDAPKNVRLLKEIALEYETLQHTLVLVSHAFDIPPEIKRYCAYFQLTLPSTVQLQNLIYLEVDKIRH
QGTPLLVDDTAVVKLAENLRGVTLDDARRLVRKAIVDDGAITLSDIDAINKAKFQLLDLNGVLQFEYDTSDFSQVAGLHN
LKKWLKQRAPIAAVSTLDQADKPTSVQHVKALDAPKGILLLGVQGSGKSLAAKAVAGVWQRPLLRLDMAALYNKYIGETE
KNLRNALDLADMMSPCVLWIDEIEKGLSGSSSDEGTSTRILGTLLTWMAERKSEVFVVATANDIQALPPELMRKGRMDEI
FFVDLPDEAIRKAIFLIHCQRRGIDVASLDLAQLSARSQGFSGAEIEQAVIAAMYTARSVERSVDQVLLLEELSKTRPLS
VVMSDKINALRQWAASRTVNAHE

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI153792536, Length=195, Percent_Identity=32.3076923076923, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI6005942, Length=179, Percent_Identity=31.2849162011173, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI157671927, Length=183, Percent_Identity=33.3333333333333, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI195539395, Length=239, Percent_Identity=29.7071129707113, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI24430151, Length=190, Percent_Identity=33.6842105263158, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI24497618, Length=197, Percent_Identity=32.48730964467, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI45643123, Length=149, Percent_Identity=37.5838926174497, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI45643125, Length=149, Percent_Identity=37.5838926174497, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI4506209, Length=215, Percent_Identity=29.7674418604651, Blast_Score=90, Evalue=6e-18,
Organism=Homo sapiens, GI300192933, Length=258, Percent_Identity=28.6821705426357, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI21361144, Length=282, Percent_Identity=25.177304964539, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI4507173, Length=244, Percent_Identity=32.7868852459016, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI5729991, Length=182, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI89064750, Length=182, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI24430155, Length=182, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI21327685, Length=212, Percent_Identity=32.0754716981132, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI7657689, Length=212, Percent_Identity=32.0754716981132, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI24497435, Length=211, Percent_Identity=30.3317535545024, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI7019569, Length=257, Percent_Identity=26.0700389105058, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI31377644, Length=187, Percent_Identity=28.3422459893048, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI11875211, Length=182, Percent_Identity=30.2197802197802, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI40806170, Length=182, Percent_Identity=30.2197802197802, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI4505725, Length=185, Percent_Identity=28.6486486486486, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI17865802, Length=235, Percent_Identity=27.2340425531915, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI31742536, Length=229, Percent_Identity=28.3842794759825, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI112789543, Length=229, Percent_Identity=28.3842794759825, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI5901990, Length=192, Percent_Identity=30.2083333333333, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI226371754, Length=200, Percent_Identity=30.5, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI229577436, Length=221, Percent_Identity=29.4117647058824, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI156564401, Length=233, Percent_Identity=28.755364806867, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI310125282, Length=233, Percent_Identity=28.755364806867, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI310125280, Length=233, Percent_Identity=28.755364806867, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI194018488, Length=129, Percent_Identity=34.8837209302326, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI14149767, Length=181, Percent_Identity=28.1767955801105, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI62177112, Length=181, Percent_Identity=28.1767955801105, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1789568, Length=202, Percent_Identity=32.6732673267327, Blast_Score=97, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17532375, Length=250, Percent_Identity=31.6, Blast_Score=114, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI17508053, Length=306, Percent_Identity=28.1045751633987, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17531535, Length=260, Percent_Identity=28.0769230769231, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17554786, Length=207, Percent_Identity=31.4009661835749, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71987372, Length=236, Percent_Identity=30.0847457627119, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71987364, Length=236, Percent_Identity=30.0847457627119, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17563250, Length=189, Percent_Identity=31.7460317460317, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71994521, Length=251, Percent_Identity=30.2788844621514, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17505546, Length=198, Percent_Identity=32.3232323232323, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17537217, Length=228, Percent_Identity=31.5789473684211, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17554264, Length=187, Percent_Identity=32.620320855615, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17563248, Length=215, Percent_Identity=29.7674418604651, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17508701, Length=278, Percent_Identity=24.8201438848921, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25144281, Length=205, Percent_Identity=29.2682926829268, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI25144278, Length=205, Percent_Identity=29.2682926829268, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI193206116, Length=186, Percent_Identity=31.1827956989247, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI133931034, Length=186, Percent_Identity=31.1827956989247, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193206114, Length=186, Percent_Identity=31.1827956989247, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562804, Length=200, Percent_Identity=32.5, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI25146157, Length=252, Percent_Identity=27.3809523809524, Blast_Score=82, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17554784, Length=182, Percent_Identity=31.8681318681319, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI86561515, Length=234, Percent_Identity=28.2051282051282, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI115534323, Length=298, Percent_Identity=27.5167785234899, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI25153574, Length=195, Percent_Identity=28.2051282051282, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193209502, Length=195, Percent_Identity=28.2051282051282, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI133901658, Length=203, Percent_Identity=31.0344827586207, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI133901662, Length=203, Percent_Identity=31.0344827586207, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17541226, Length=253, Percent_Identity=26.4822134387352, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17541224, Length=253, Percent_Identity=26.4822134387352, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32563584, Length=228, Percent_Identity=27.6315789473684, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17508421, Length=228, Percent_Identity=27.6315789473684, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6320077, Length=221, Percent_Identity=32.1266968325792, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6324833, Length=202, Percent_Identity=32.6732673267327, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6324691, Length=339, Percent_Identity=28.6135693215339, Blast_Score=97, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6322994, Length=246, Percent_Identity=29.2682926829268, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6323429, Length=235, Percent_Identity=28.936170212766, Blast_Score=94, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6320854, Length=249, Percent_Identity=31.3253012048193, Blast_Score=93, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6324000, Length=230, Percent_Identity=31.304347826087, Blast_Score=90, Evalue=7e-19,
Organism=Saccharomyces cerevisiae, GI6321709, Length=253, Percent_Identity=28.0632411067194, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6320602, Length=230, Percent_Identity=30, Blast_Score=88, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6320197, Length=189, Percent_Identity=30.1587301587302, Blast_Score=88, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6321390, Length=191, Percent_Identity=29.3193717277487, Blast_Score=86, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6322704, Length=213, Percent_Identity=28.169014084507, Blast_Score=84, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6322651, Length=197, Percent_Identity=29.4416243654822, Blast_Score=84, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6321465, Length=189, Percent_Identity=27.5132275132275, Blast_Score=81, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6323736, Length=201, Percent_Identity=32.3383084577114, Blast_Score=80, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6325183, Length=245, Percent_Identity=30.2040816326531, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6325281, Length=196, Percent_Identity=30.6122448979592, Blast_Score=78, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6325431, Length=230, Percent_Identity=29.5652173913043, Blast_Score=74, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6319554, Length=251, Percent_Identity=27.8884462151394, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320887, Length=236, Percent_Identity=27.1186440677966, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281365776, Length=197, Percent_Identity=32.48730964467, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24660075, Length=197, Percent_Identity=32.48730964467, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI45552965, Length=197, Percent_Identity=32.48730964467, Blast_Score=105, Evalue=8e-23,
Organism=Drosophila melanogaster, GI161076488, Length=231, Percent_Identity=29.004329004329, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI17137560, Length=231, Percent_Identity=29.004329004329, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI161076486, Length=231, Percent_Identity=29.004329004329, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24652279, Length=179, Percent_Identity=32.4022346368715, Blast_Score=102, Evalue=8e-22,
Organism=Drosophila melanogaster, GI24639391, Length=279, Percent_Identity=31.1827956989247, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24649446, Length=189, Percent_Identity=32.2751322751323, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI281363136, Length=201, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=7e-20,
Organism=Drosophila melanogaster, GI78707192, Length=201, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=7e-20,
Organism=Drosophila melanogaster, GI20129423, Length=205, Percent_Identity=33.1707317073171, Blast_Score=96, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24640100, Length=200, Percent_Identity=32, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24665814, Length=242, Percent_Identity=31.8181818181818, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28574878, Length=242, Percent_Identity=31.8181818181818, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI20129529, Length=226, Percent_Identity=31.4159292035398, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI17137738, Length=215, Percent_Identity=29.7674418604651, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI19920408, Length=211, Percent_Identity=31.2796208530806, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24656820, Length=229, Percent_Identity=29.2576419213974, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24663015, Length=203, Percent_Identity=31.0344827586207, Blast_Score=90, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24656825, Length=229, Percent_Identity=29.2576419213974, Blast_Score=90, Evalue=5e-18,
Organism=Drosophila melanogaster, GI21355121, Length=233, Percent_Identity=28.755364806867, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI17738151, Length=290, Percent_Identity=26.2068965517241, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI18860063, Length=182, Percent_Identity=30.2197802197802, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI281361487, Length=196, Percent_Identity=30.1020408163265, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24644145, Length=223, Percent_Identity=30.4932735426009, Blast_Score=86, Evalue=9e-17,
Organism=Drosophila melanogaster, GI18859657, Length=183, Percent_Identity=32.2404371584699, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24651451, Length=213, Percent_Identity=30.9859154929577, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI19921202, Length=205, Percent_Identity=29.2682926829268, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24581396, Length=227, Percent_Identity=30.3964757709251, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24658770, Length=212, Percent_Identity=30.6603773584906, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571849, Length=244, Percent_Identity=30.7377049180328, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571847, Length=244, Percent_Identity=30.7377049180328, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281360144, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281360140, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281360136, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24644411, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281360142, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI21357333, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281360146, Length=206, Percent_Identity=29.126213592233, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI281360138, Length=206, Percent_Identity=29.126213592233, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28573010, Length=210, Percent_Identity=28.0952380952381, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR001984
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 56036; Mature: 56036

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDIRDLTSVLRSNTPIVVIETYEEYRVVELLKRVASVLYQPVFTWSITQGLARVDKPMA
CCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AQKFNSEPTDLLGQIKSTSQQGIYVLCDFHPFVIDAPKNVRLLKEIALEYETLQHTLVLV
HHHCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
SHAFDIPPEIKRYCAYFQLTLPSTVQLQNLIYLEVDKIRHQGTPLLVDDTAVVKLAENLR
HHHCCCCHHHHHHHHHEEEECCCCEEHHHEEEEEEHHHHCCCCCEEECCHHHHHHHHHCC
GVTLDDARRLVRKAIVDDGAITLSDIDAINKAKFQLLDLNGVLQFEYDTSDFSQVAGLHN
CCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCEEEEEECCCEEEEEECCCHHHHHHHHHH
LKKWLKQRAPIAAVSTLDQADKPTSVQHVKALDAPKGILLLGVQGSGKSLAAKAVAGVWQ
HHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
RPLLRLDMAALYNKYIGETEKNLRNALDLADMMSPCVLWIDEIEKGLSGSSSDEGTSTRI
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
LGTLLTWMAERKSEVFVVATANDIQALPPELMRKGRMDEIFFVDLPDEAIRKAIFLIHCQ
HHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHEEC
RRGIDVASLDLAQLSARSQGFSGAEIEQAVIAAMYTARSVERSVDQVLLLEELSKTRPLS
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VVMSDKINALRQWAASRTVNAHE
EEHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQDIRDLTSVLRSNTPIVVIETYEEYRVVELLKRVASVLYQPVFTWSITQGLARVDKPMA
CCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AQKFNSEPTDLLGQIKSTSQQGIYVLCDFHPFVIDAPKNVRLLKEIALEYETLQHTLVLV
HHHCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
SHAFDIPPEIKRYCAYFQLTLPSTVQLQNLIYLEVDKIRHQGTPLLVDDTAVVKLAENLR
HHHCCCCHHHHHHHHHEEEECCCCEEHHHEEEEEEHHHHCCCCCEEECCHHHHHHHHHCC
GVTLDDARRLVRKAIVDDGAITLSDIDAINKAKFQLLDLNGVLQFEYDTSDFSQVAGLHN
CCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCEEEEEECCCEEEEEECCCHHHHHHHHHH
LKKWLKQRAPIAAVSTLDQADKPTSVQHVKALDAPKGILLLGVQGSGKSLAAKAVAGVWQ
HHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
RPLLRLDMAALYNKYIGETEKNLRNALDLADMMSPCVLWIDEIEKGLSGSSSDEGTSTRI
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
LGTLLTWMAERKSEVFVVATANDIQALPPELMRKGRMDEIFFVDLPDEAIRKAIFLIHCQ
HHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHEEC
RRGIDVASLDLAQLSARSQGFSGAEIEQAVIAAMYTARSVERSVDQVLLLEELSKTRPLS
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VVMSDKINALRQWAASRTVNAHE
EEHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]