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The map label for this gene is glpD [H]

Identifier: 126173112

GI number: 126173112

Start: 978284

End: 979459

Strand: Direct

Name: glpD [H]

Synonym: Sbal_0867

Alternate gene names: 126173112

Gene position: 978284-979459 (Clockwise)

Preceding gene: 126173111

Following gene: 126173113

Centisome position: 19.08

GC content: 49.83

Gene sequence:

>1176_bases
ATGGCCAGTTTCGATATAGCCATTATTGGCGGTGGGATCAGCGGTGTCGGCATTGCCCAATATGCGGTAGCGGCGGGCTA
TTCTACCTTGCTGATTGAAAAGGGCGAAATTGGCGGCCAAACCTCAGCTAATTCCAGCAAGCTTATCCATGGCGGCTTGC
GCTATTTAGAAACGGGGCAAATCAATTTAGTCCGTAAGTCCTTGCTTGAACGGCGCCATTTACTCAATCTAGCGCCCACT
CTGGTTAAAGCTGTGCCTTTTTATATTCCAGTGTATGACAACAGTCAGCGCAGTCCCTGGACTATTCGCGCGGGCTTAAG
CATGTATGCGCTGCTGAGTGAGTTTGATCCCTTGGGCCAATTTGTGTCAGTGCCTGCCGTGCATTGGCATCGTTTTAAAG
GATTGAAACTCAATGGATTAAAGGCGGTGTTTCAGTATTGGGATGCGCAGACCGACGATAAGTTGTTAACTCAAGCGGTG
GCGCGCAGCGCGCAGGCATTGGGCGCCGAAGTCTATGCCGAGGCTGAATTTCTTGAGCTGGAACATAGGCGCGAAACTTG
TGAGCTAAGTTTTAGCCACAGGGGCGAAATCCATAAAGCCGAGGCGAGTCTAGTCATCAATGCTGCCGGCCCTTGGGTGA
ATGCGGTTTTAAGCAAAGTCTTGCCTCCACTTGCGGGTGTTGAACTCGATTGTGTGCAAGGCGCCCATGTGCTACTGGAT
ATTCCTGCGCCCGATGGCATCTTGTATTTAGAGTCTTGCTTCGATAAGCGGGTCATATTTGTGATGCCTTGGTATGGGCA
AACCTTGGTTGGCACCACAGAAACGGAACTGGCTTCTTTGGATAAACCACCCGAAGCGACCGAGTCTGAAATTAATTATC
TGCTTGGTATTTATAAGCATTACTTCCCGCTAACGCCGGAGATTGATGAGCTTAAGACAAAGATAACCCAGACCTTCTGC
GGCATTCGGGTTTTACCTAAGCAAAATAGCCAAGCCTTTGAGCGGCCGCGGGATACTTTGATGAAAACATCGATTTCCCA
TCCGCGCATCCTCAGTTTATACGGCGGTAAGTTAACGACGTTTCGCAGCACCTCGGCAGAAGTACTTGAATGGATTGAAA
AGGCCCTTGGTAAGCGCGAGGCGATTGCCGATGTTGATAAGCTCAGCTTGTCTTGA

Upstream 100 bases:

>100_bases
TTATTGACATATTAACGCTTATTAGCTGTTCGACTGAGCTTGATTGAATGCATGAGGCTCAGTAGGTCGGTCGTCTATGG
AACGTTAGCGAGAGTGAGTT

Downstream 100 bases:

>100_bases
ATAAACCTAAAATTGCGCCCTTGGTACTGGTTGAGTGTGTTTCGAGATGATTTTTACCCGTAAAACCGCTACAGTGTGGC
GCTTTTTTACTGAATCTAGG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MASFDIAIIGGGISGVGIAQYAVAAGYSTLLIEKGEIGGQTSANSSKLIHGGLRYLETGQINLVRKSLLERRHLLNLAPT
LVKAVPFYIPVYDNSQRSPWTIRAGLSMYALLSEFDPLGQFVSVPAVHWHRFKGLKLNGLKAVFQYWDAQTDDKLLTQAV
ARSAQALGAEVYAEAEFLELEHRRETCELSFSHRGEIHKAEASLVINAAGPWVNAVLSKVLPPLAGVELDCVQGAHVLLD
IPAPDGILYLESCFDKRVIFVMPWYGQTLVGTTETELASLDKPPEATESEINYLLGIYKHYFPLTPEIDELKTKITQTFC
GIRVLPKQNSQAFERPRDTLMKTSISHPRILSLYGGKLTTFRSTSAEVLEWIEKALGKREAIADVDKLSLS

Sequences:

>Translated_391_residues
MASFDIAIIGGGISGVGIAQYAVAAGYSTLLIEKGEIGGQTSANSSKLIHGGLRYLETGQINLVRKSLLERRHLLNLAPT
LVKAVPFYIPVYDNSQRSPWTIRAGLSMYALLSEFDPLGQFVSVPAVHWHRFKGLKLNGLKAVFQYWDAQTDDKLLTQAV
ARSAQALGAEVYAEAEFLELEHRRETCELSFSHRGEIHKAEASLVINAAGPWVNAVLSKVLPPLAGVELDCVQGAHVLLD
IPAPDGILYLESCFDKRVIFVMPWYGQTLVGTTETELASLDKPPEATESEINYLLGIYKHYFPLTPEIDELKTKITQTFC
GIRVLPKQNSQAFERPRDTLMKTSISHPRILSLYGGKLTTFRSTSAEVLEWIEKALGKREAIADVDKLSLS
>Mature_390_residues
ASFDIAIIGGGISGVGIAQYAVAAGYSTLLIEKGEIGGQTSANSSKLIHGGLRYLETGQINLVRKSLLERRHLLNLAPTL
VKAVPFYIPVYDNSQRSPWTIRAGLSMYALLSEFDPLGQFVSVPAVHWHRFKGLKLNGLKAVFQYWDAQTDDKLLTQAVA
RSAQALGAEVYAEAEFLELEHRRETCELSFSHRGEIHKAEASLVINAAGPWVNAVLSKVLPPLAGVELDCVQGAHVLLDI
PAPDGILYLESCFDKRVIFVMPWYGQTLVGTTETELASLDKPPEATESEINYLLGIYKHYFPLTPEIDELKTKITQTFCG
IRVLPKQNSQAFERPRDTLMKTSISHPRILSLYGGKLTTFRSTSAEVLEWIEKALGKREAIADVDKLSLS

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=394, Percent_Identity=29.4416243654822, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI285002231, Length=394, Percent_Identity=29.4416243654822, Blast_Score=144, Evalue=2e-34,
Organism=Escherichia coli, GI2367226, Length=355, Percent_Identity=33.2394366197183, Blast_Score=151, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI115534726, Length=393, Percent_Identity=29.0076335877863, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17509253, Length=393, Percent_Identity=27.4809160305344, Blast_Score=115, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6322036, Length=400, Percent_Identity=27.75, Blast_Score=119, Evalue=1e-27,
Organism=Drosophila melanogaster, GI161077125, Length=396, Percent_Identity=29.2929292929293, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24653942, Length=396, Percent_Identity=29.2929292929293, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24653944, Length=396, Percent_Identity=29.2929292929293, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI20130025, Length=396, Percent_Identity=29.2929292929293, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24586295, Length=384, Percent_Identity=29.4270833333333, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI19921278, Length=402, Percent_Identity=25.6218905472637, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 43141; Mature: 43010

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFDIAIIGGGISGVGIAQYAVAAGYSTLLIEKGEIGGQTSANSSKLIHGGLRYLETGQ
CCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCHHHHCCCC
INLVRKSLLERRHLLNLAPTLVKAVPFYIPVYDNSQRSPWTIRAGLSMYALLSEFDPLGQ
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEECCHHHHHHHHHCCHHHH
FVSVPAVHWHRFKGLKLNGLKAVFQYWDAQTDDKLLTQAVARSAQALGAEVYAEAEFLEL
HHCCCCHHHHHCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
EHRRETCELSFSHRGEIHKAEASLVINAAGPWVNAVLSKVLPPLAGVELDCVQGAHVLLD
HHHHHHEEECCCCCCCEEECCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEE
IPAPDGILYLESCFDKRVIFVMPWYGQTLVGTTETELASLDKPPEATESEINYLLGIYKH
CCCCCCEEEEEHHHCCCEEEEECCCCCEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
YFPLTPEIDELKTKITQTFCGIRVLPKQNSQAFERPRDTLMKTSISHPRILSLYGGKLTT
HCCCCCCHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEE
FRSTSAEVLEWIEKALGKREAIADVDKLSLS
ECCCHHHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure 
ASFDIAIIGGGISGVGIAQYAVAAGYSTLLIEKGEIGGQTSANSSKLIHGGLRYLETGQ
CCEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCHHHHCCCC
INLVRKSLLERRHLLNLAPTLVKAVPFYIPVYDNSQRSPWTIRAGLSMYALLSEFDPLGQ
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEECCHHHHHHHHHCCHHHH
FVSVPAVHWHRFKGLKLNGLKAVFQYWDAQTDDKLLTQAVARSAQALGAEVYAEAEFLEL
HHCCCCHHHHHCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
EHRRETCELSFSHRGEIHKAEASLVINAAGPWVNAVLSKVLPPLAGVELDCVQGAHVLLD
HHHHHHEEECCCCCCCEEECCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEE
IPAPDGILYLESCFDKRVIFVMPWYGQTLVGTTETELASLDKPPEATESEINYLLGIYKH
CCCCCCEEEEEHHHCCCEEEEECCCCCEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
YFPLTPEIDELKTKITQTFCGIRVLPKQNSQAFERPRDTLMKTSISHPRILSLYGGKLTT
HCCCCCCHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEE
FRSTSAEVLEWIEKALGKREAIADVDKLSLS
ECCCHHHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]