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The map label for this gene is recJ [H]

Identifier: 126173090

GI number: 126173090

Start: 954926

End: 956659

Strand: Direct

Name: recJ [H]

Synonym: Sbal_0845

Alternate gene names: 126173090

Gene position: 954926-956659 (Clockwise)

Preceding gene: 126173089

Following gene: 126173091

Centisome position: 18.62

GC content: 52.19

Gene sequence:

>1734_bases
TTGAGTCCCTTGATCCATAAGATAGTCCGTCGCCCAACCGTTGATGATAGCCATTTACCCGCTCATCTTTCGCCGCTATT
GAAGCAGCTTTACGCTCGCCGCGGTGCGCTCACCCACGAATGCGAACTTGTCCTCAAGGGTCTATTAAGACCTGAAACCA
TGAAAGGCCTGCCCGAAGCTGCGGCGCTTATTGCCGATGCCATGCAGGCGAATAAGTCGATTTTGATCGTCGGTGATTTT
GATGCCGATGGCGCGACCTCAACCAGCGTATGTATGCTGGCGCTACGGATGATGGGCGCAGTTAAAGTGGATTATTTGAT
CCCCAATCGCTTCGATTACGGCTACGGCTTAAGCCCTGAAATTGTTGCGGTTGCGGCGTCTAAACAGGCTGAAATGCTGA
TCACTGTCGATAACGGTATTTCATCGATTGATGGCGTTGCTGCGGCCAAAGCCTTTGGTATGCAAGTGGTGATTACTGAC
CATCATTTACCCGGACACGAGTTGCCTGCTGCTGATGCGATAGTGAATCCGAATCAACCCGATTGCCCCTTTGCGAGTAA
ATCGATTGCCGGTGTCGGTGTCGCCTTTTATTTGATGACGGCATTAAGGGCTGAACTGCGAACGCGAAACTGGTATCAAA
CGCGCGGTATTGCTGAGCCTAATCTAGGGACGCTGCTCGACATTGTTGCCCTAGGTACCGTTGCCGATGTGGTATCACTC
GATGCCAATAATCGCATTTTAGTCGAAGCGGGTTTGCAGCGCGTGCGAGCGGGCCGCTGCCGTGTGGGCATTACCGCGCT
GCTTGAAGTCGCGAAACGCAACCCCGCGCGTATTGTTGCATCTGATTTTGGTTTTGCCGTGGGCCCAAGGCTTAATGCCG
CAGGCCGGCTGGATGAAATGGCGCTTGGGGTCGAAACCTTACTCTGTGAAGACATGATGTACGCGCGGCGTATGGCGGCC
GAGCTCGATGGGTTAAACCAAGAGCGTCGTGAGCTGGAAGTCGGCATGCAGCAGGAAGCCTTAAAAAGCCTTGAGCACTT
AAAGCTCAACGAAGACGAGTTACCTTGGGGTATCGCGCTATTTCAAGAAGATTGGCACCAAGGCGTCATTGGTATTTTGG
CCTCGCGCATTAAAGACAAATACCACAGACCCGTGATCGCCTTTGCCGATGCGGGCAATGGTCAAATTAAAGGCTCGGCG
CGTTCAATCAAAGGCTTGCATATGCGCGACTTGCTGGAGCTGGTCAACACGCGCCACCCAGGATTGATTATCAAGTTTGG
TGGCCATGCGATGGCGGCGGGCTTATCACTCAAAGCCGGTAGTTTTGCGACATTTGCCAAAGCCTATGATGATGCGGTGC
GTGAACTGCTCAAACCTGAACTGCTAACTGGCGAGCTGTGGTCCGATGGTGAACTCACTCCCACTGAACTGAATCTTGAG
ATGGCCCAGTTACTGCGCAATGCTGGGCCTTGGGGACAAGCCTTTGAAGAGCCACTGTTTGATGGCTATTTTACGATAGT
GCAGCAACGCCTCGTCGGCGAGCGCCATCTTAAGCTTGTACTCGAAACCCAGTGCGGCACTGTGATGCTCGATGCGATTG
CTTTTAATGTGGATTTACACACTTGGCCCGATGCGACCATTCACCATGCTCGTATCGTTTATAAGCTTGATGTGAATGAG
TATCGAGGTAATTTCACCTTGCAACTCATGGTTGAGCAGATTGAAGCCATGTAG

Upstream 100 bases:

>100_bases
GAAGCGCGTCAGTAACAGTCAAAATAGTAAAATTTATCCCACTAAAGGTGAGCTTAAGGCTCACCTTTTTGTTATCTTAT
CGCCACGATTTCATGAGAGT

Downstream 100 bases:

>100_bases
TTGCTGCAATGGATAACGTGGTTATAGCCTAGATATTGAATGCCAAATGCTGCACTTAATTGGGGATAAAAAGGGAATTG
AGTCATGCCGACATATAGTG

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 577; Mature: 576

Protein sequence:

>577_residues
MSPLIHKIVRRPTVDDSHLPAHLSPLLKQLYARRGALTHECELVLKGLLRPETMKGLPEAAALIADAMQANKSILIVGDF
DADGATSTSVCMLALRMMGAVKVDYLIPNRFDYGYGLSPEIVAVAASKQAEMLITVDNGISSIDGVAAAKAFGMQVVITD
HHLPGHELPAADAIVNPNQPDCPFASKSIAGVGVAFYLMTALRAELRTRNWYQTRGIAEPNLGTLLDIVALGTVADVVSL
DANNRILVEAGLQRVRAGRCRVGITALLEVAKRNPARIVASDFGFAVGPRLNAAGRLDEMALGVETLLCEDMMYARRMAA
ELDGLNQERRELEVGMQQEALKSLEHLKLNEDELPWGIALFQEDWHQGVIGILASRIKDKYHRPVIAFADAGNGQIKGSA
RSIKGLHMRDLLELVNTRHPGLIIKFGGHAMAAGLSLKAGSFATFAKAYDDAVRELLKPELLTGELWSDGELTPTELNLE
MAQLLRNAGPWGQAFEEPLFDGYFTIVQQRLVGERHLKLVLETQCGTVMLDAIAFNVDLHTWPDATIHHARIVYKLDVNE
YRGNFTLQLMVEQIEAM

Sequences:

>Translated_577_residues
MSPLIHKIVRRPTVDDSHLPAHLSPLLKQLYARRGALTHECELVLKGLLRPETMKGLPEAAALIADAMQANKSILIVGDF
DADGATSTSVCMLALRMMGAVKVDYLIPNRFDYGYGLSPEIVAVAASKQAEMLITVDNGISSIDGVAAAKAFGMQVVITD
HHLPGHELPAADAIVNPNQPDCPFASKSIAGVGVAFYLMTALRAELRTRNWYQTRGIAEPNLGTLLDIVALGTVADVVSL
DANNRILVEAGLQRVRAGRCRVGITALLEVAKRNPARIVASDFGFAVGPRLNAAGRLDEMALGVETLLCEDMMYARRMAA
ELDGLNQERRELEVGMQQEALKSLEHLKLNEDELPWGIALFQEDWHQGVIGILASRIKDKYHRPVIAFADAGNGQIKGSA
RSIKGLHMRDLLELVNTRHPGLIIKFGGHAMAAGLSLKAGSFATFAKAYDDAVRELLKPELLTGELWSDGELTPTELNLE
MAQLLRNAGPWGQAFEEPLFDGYFTIVQQRLVGERHLKLVLETQCGTVMLDAIAFNVDLHTWPDATIHHARIVYKLDVNE
YRGNFTLQLMVEQIEAM
>Mature_576_residues
SPLIHKIVRRPTVDDSHLPAHLSPLLKQLYARRGALTHECELVLKGLLRPETMKGLPEAAALIADAMQANKSILIVGDFD
ADGATSTSVCMLALRMMGAVKVDYLIPNRFDYGYGLSPEIVAVAASKQAEMLITVDNGISSIDGVAAAKAFGMQVVITDH
HLPGHELPAADAIVNPNQPDCPFASKSIAGVGVAFYLMTALRAELRTRNWYQTRGIAEPNLGTLLDIVALGTVADVVSLD
ANNRILVEAGLQRVRAGRCRVGITALLEVAKRNPARIVASDFGFAVGPRLNAAGRLDEMALGVETLLCEDMMYARRMAAE
LDGLNQERRELEVGMQQEALKSLEHLKLNEDELPWGIALFQEDWHQGVIGILASRIKDKYHRPVIAFADAGNGQIKGSAR
SIKGLHMRDLLELVNTRHPGLIIKFGGHAMAAGLSLKAGSFATFAKAYDDAVRELLKPELLTGELWSDGELTPTELNLEM
AQLLRNAGPWGQAFEEPLFDGYFTIVQQRLVGERHLKLVLETQCGTVMLDAIAFNVDLHTWPDATIHHARIVYKLDVNEY
RGNFTLQLMVEQIEAM

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=568, Percent_Identity=57.3943661971831, Blast_Score=672, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 63166; Mature: 63035

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLIHKIVRRPTVDDSHLPAHLSPLLKQLYARRGALTHECELVLKGLLRPETMKGLPEA
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCHHH
AALIADAMQANKSILIVGDFDADGATSTSVCMLALRMMGAVKVDYLIPNRFDYGYGLSPE
HHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCC
IVAVAASKQAEMLITVDNGISSIDGVAAAKAFGMQVVITDHHLPGHELPAADAIVNPNQP
EEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCEECCCCC
DCPFASKSIAGVGVAFYLMTALRAELRTRNWYQTRGIAEPNLGTLLDIVALGTVADVVSL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHEE
DANNRILVEAGLQRVRAGRCRVGITALLEVAKRNPARIVASDFGFAVGPRLNAAGRLDEM
CCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCEECCCCCCCCCCHHHH
ALGVETLLCEDMMYARRMAAELDGLNQERRELEVGMQQEALKSLEHLKLNEDELPWGIAL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHH
FQEDWHQGVIGILASRIKDKYHRPVIAFADAGNGQIKGSARSIKGLHMRDLLELVNTRHP
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCHHHHCCCCHHHHHHHHCCCCC
GLIIKFGGHAMAAGLSLKAGSFATFAKAYDDAVRELLKPELLTGELWSDGELTPTELNLE
CEEEEECCCEEECCCEECCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHCCHH
MAQLLRNAGPWGQAFEEPLFDGYFTIVQQRLVGERHLKLVLETQCGTVMLDAIAFNVDLH
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCEEEEEEEEEEEEE
TWPDATIHHARIVYKLDVNEYRGNFTLQLMVEQIEAM
CCCCCCEEEEEEEEEEECHHHCCCEEEEHHHHHHHCC
>Mature Secondary Structure 
SPLIHKIVRRPTVDDSHLPAHLSPLLKQLYARRGALTHECELVLKGLLRPETMKGLPEA
CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCHHH
AALIADAMQANKSILIVGDFDADGATSTSVCMLALRMMGAVKVDYLIPNRFDYGYGLSPE
HHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCC
IVAVAASKQAEMLITVDNGISSIDGVAAAKAFGMQVVITDHHLPGHELPAADAIVNPNQP
EEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCEECCCCC
DCPFASKSIAGVGVAFYLMTALRAELRTRNWYQTRGIAEPNLGTLLDIVALGTVADVVSL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHEE
DANNRILVEAGLQRVRAGRCRVGITALLEVAKRNPARIVASDFGFAVGPRLNAAGRLDEM
CCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCEECCCCCCCCCCHHHH
ALGVETLLCEDMMYARRMAAELDGLNQERRELEVGMQQEALKSLEHLKLNEDELPWGIAL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHH
FQEDWHQGVIGILASRIKDKYHRPVIAFADAGNGQIKGSARSIKGLHMRDLLELVNTRHP
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCHHHHCCCCHHHHHHHHCCCCC
GLIIKFGGHAMAAGLSLKAGSFATFAKAYDDAVRELLKPELLTGELWSDGELTPTELNLE
CEEEEECCCEEECCCEECCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHCCHH
MAQLLRNAGPWGQAFEEPLFDGYFTIVQQRLVGERHLKLVLETQCGTVMLDAIAFNVDLH
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCEEEEEEEEEEEEE
TWPDATIHHARIVYKLDVNEYRGNFTLQLMVEQIEAM
CCCCCCEEEEEEEEEEECHHHCCCEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]