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The map label for this gene is ychQ [C]

Identifier: 126172948

GI number: 126172948

Start: 794436

End: 794831

Strand: Direct

Name: ychQ [C]

Synonym: Sbal_0700

Alternate gene names: 126172948

Gene position: 794436-794831 (Clockwise)

Preceding gene: 126172945

Following gene: 126172949

Centisome position: 15.49

GC content: 43.43

Gene sequence:

>396_bases
ATGGAAACTTTTTACAGTCTATATCCTGCGGTTAAACATCTGCATTTTACCTTTATCGCGTTGAGCGTGTTGCTGCTTAC
CGTGCGCTTTGTCCTGCATCTGCGCCAATCGGCTTTGATGGAGAAGAAACTGCTCAAGATAGCGCCCCATGTTATCGACA
CTTTCTTACTGCTGTCGGGCTTAACTCTGTGTTTTATGATCCAGCAATTTCCTTTTGTCGATCCTTGGATGACCGAAAAA
ATCGGTGCTGTGGTTGCCTATATTGTACTAGGCGCGATTGCTATAAAGGCGAACAGAAACAAGTTGTTCAAAGTGTTTGC
TTACTTAGGCGCGATAGGCTGGTTGGTTTATGCTGCTAAATTGGCTCATTTTAAACAAGCGGTATTATTGGGTTAA

Upstream 100 bases:

>100_bases
TTTTATGATGTTAGCTCTGGCTATCTAGGCTGATAGGCATTGGTATGCCGTCACGGATTAGGGTAAACTAGCGCCTTTGT
CACTGGCCATAAGTATCGTA

Downstream 100 bases:

>100_bases
TGGGTAACTACACTCTGCAAGATGGCATTTCATTGCCCGAGTCGGCATTGGATGTAGGTGCGCACCTTGGATTTTCTAAA
CTAGAAGCCGCTAAATGGGC

Product: invasion gene expression up-regulator SirB

Products: NA

Alternate protein names: Transcriptional Regulator; SirB Family Protein; Protein SirB Invasion Gene Expression Up-Regulator; Invasion Gene Expression Up-Regulator

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
METFYSLYPAVKHLHFTFIALSVLLLTVRFVLHLRQSALMEKKLLKIAPHVIDTFLLLSGLTLCFMIQQFPFVDPWMTEK
IGAVVAYIVLGAIAIKANRNKLFKVFAYLGAIGWLVYAAKLAHFKQAVLLG

Sequences:

>Translated_131_residues
METFYSLYPAVKHLHFTFIALSVLLLTVRFVLHLRQSALMEKKLLKIAPHVIDTFLLLSGLTLCFMIQQFPFVDPWMTEK
IGAVVAYIVLGAIAIKANRNKLFKVFAYLGAIGWLVYAAKLAHFKQAVLLG
>Mature_131_residues
METFYSLYPAVKHLHFTFIALSVLLLTVRFVLHLRQSALMEKKLLKIAPHVIDTFLLLSGLTLCFMIQQFPFVDPWMTEK
IGAVVAYIVLGAIAIKANRNKLFKVFAYLGAIGWLVYAAKLAHFKQAVLLG

Specific function: Unknown

COG id: COG3094

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787464, Length=88, Percent_Identity=43.1818181818182, Blast_Score=59, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14810; Mature: 14810

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METFYSLYPAVKHLHFTFIALSVLLLTVRFVLHLRQSALMEKKLLKIAPHVIDTFLLLSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLCFMIQQFPFVDPWMTEKIGAVVAYIVLGAIAIKANRNKLFKVFAYLGAIGWLVYAAK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LAHFKQAVLLG
HHHHHHHHHCC
>Mature Secondary Structure
METFYSLYPAVKHLHFTFIALSVLLLTVRFVLHLRQSALMEKKLLKIAPHVIDTFLLLSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLCFMIQQFPFVDPWMTEKIGAVVAYIVLGAIAIKANRNKLFKVFAYLGAIGWLVYAAK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LAHFKQAVLLG
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA