| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is ywrD [H]
Identifier: 126172853
GI number: 126172853
Start: 689113
End: 690825
Strand: Direct
Name: ywrD [H]
Synonym: Sbal_0604
Alternate gene names: 126172853
Gene position: 689113-690825 (Clockwise)
Preceding gene: 126172852
Following gene: 126172854
Centisome position: 13.44
GC content: 49.04
Gene sequence:
>1713_bases ATGATAAAAACAATAAAATCAATTTGTACCTTAGTGACAGTGGCGACGGCAATATCGTCTTCAGGAGTGATGGCCATGGA TAGGATCACGGGTAAAGCCTTTGCGACGCGCTCAGAAGTGTATGCCACCCATGGAATGGCGGCGACCAGTCAACCACTCG CCACGCAAGTCGCTATTGATATACTCAAGCAGGGCGGCAGCGCGGTCGATGCGGCGATTGCCGCCAATGCCATGCTAGGG TTAGTCGAACCAACGGGTTCGGGTGTTGGTGGTGACTTGTTTGCCATCGTCTGGAGCGCGAAAGATCAACGTCTCTATGG CCTTAACGCTTCGGGTCGCAGTCCAAAATCCTTAAGTTTAGAAAAGCTTAAATCCCTCGGCTTAGACTATTTGCCACCGC TTGGGCCTTTGCCTGTTTCTGTGCCCGGCGCTGTGGATGGTTGGTATGAACTGCATAATAAGTTCGGCAAATTAGCTATG GCCGCTAATCTCGCGCCCGCAATCCACTATGCCCGTGATGGTTTTCCTGTCTCCGAATTGATTGCTTATTATCTTGAGGG TAGCGGTAAAAAACTCGCAAAATTCCCCGGTTTTAAAGAAACTTATATGCCTAATGGCAAGATGCCAGCGGTGGGCGAAA TCTTTAAAAACCCAGCGCTTGCTAATACCTATGAGAAAATTGCCAAGGGTGGCCGCGATGCTTTCTATAAAGGCGATATC GCCAAAAGTATCGATAAGTACATGAAATCCCAAGGTGGTTATTTAAGTTATGATGACTTAGCCAGCCATACTAGCGACTG GATAGAGCCGGTTTCGGTGAACTACCGTGGTTACGATGTATGGGAACTGCCGCCCAATGGTCAAGGTATTGCGGCGCTGC AAATCCTAAAAACCATGGAACCCTTTAATGTGGCTGCTATGGGCTTTAATAGCCCCGAATATGTGCATTTATTTGTCGAA GCCAAAAAACTCGCCTTTGCCGACAGAGCTAAGTTTTATGCCGACATGGCCTTTAATAAAGTGCCGGTTAACGAGTTGAT TTCGCAGCAATACAATTATGATCGCGCTAAGTTAATCGATCCCAATAAAGCGGCCAAGAGTGTTGATGCGGGTAATCCAG CATTGCAACATGGCGATACTGTGTACCTGACCACCGCCGACAAAGATGGCAACATGGTGTCACTCATTCAAAGTAACTAC CGTGGTATGGGTTCAGGGATGACACCGCCGGATCTCGGCTTTGTGCTGCAAGACCGTGGGCAAATGTTTGATTTAACGGA AGGGCGTTTTAATACCTACGCACCTGGCAAGCGTCCATTTCATACTATCATTCCCGCTTTTGTGACCAAAGACGGCAAAC CTTGGCTCAGCTTTGGGGTGATGGGCGGCGCGACTCAACCACAAATGCACGCGCAGATTGTAATGAACCTGATTGATTTT AAAATGAACTTGCAAGAAGCGGGCGATGCCCCCAGAATTTTGCATATGGGTTCAACTGAGCCCACCGGCGAAGTGATGAA TGACGGCGGCTACGTCAGTCTGGAATCGGGCTTCCCTGTGGAAACGCGCCGTGAGCTTATCAAGAAAGGTCATGTGCTGC GTGACGGCCTTGGCGATTTTGGCGGCTATCAAGCTATTGGATTTAATGCTGAAACGGGCGTGTATCGTGCGGCTTCTGAG AGCCGTAAAGATGGTCATGCCGCCGGTTATTAA
Upstream 100 bases:
>100_bases ACGACATTTTTGCTTACGTTTAACTTGGGCCAATGCGGTATTGGTTGGTGATATTTTCGACCATCCTTGTTACCTTAATT TCTCCAGAGTGGGAGGAATT
Downstream 100 bases:
>100_bases CTTCAGCGTCACGCTAAGGTAAGCTTGAGGCAGAGTAAGCTTTGCTTCATTTATCCGATTAAACTGATTGACGAGACTTT TACAGTCTCGTCAATTTTTA
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MIKTIKSICTLVTVATAISSSGVMAMDRITGKAFATRSEVYATHGMAATSQPLATQVAIDILKQGGSAVDAAIAANAMLG LVEPTGSGVGGDLFAIVWSAKDQRLYGLNASGRSPKSLSLEKLKSLGLDYLPPLGPLPVSVPGAVDGWYELHNKFGKLAM AANLAPAIHYARDGFPVSELIAYYLEGSGKKLAKFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKGGRDAFYKGDI AKSIDKYMKSQGGYLSYDDLASHTSDWIEPVSVNYRGYDVWELPPNGQGIAALQILKTMEPFNVAAMGFNSPEYVHLFVE AKKLAFADRAKFYADMAFNKVPVNELISQQYNYDRAKLIDPNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNY RGMGSGMTPPDLGFVLQDRGQMFDLTEGRFNTYAPGKRPFHTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQIVMNLIDF KMNLQEAGDAPRILHMGSTEPTGEVMNDGGYVSLESGFPVETRRELIKKGHVLRDGLGDFGGYQAIGFNAETGVYRAASE SRKDGHAAGY
Sequences:
>Translated_570_residues MIKTIKSICTLVTVATAISSSGVMAMDRITGKAFATRSEVYATHGMAATSQPLATQVAIDILKQGGSAVDAAIAANAMLG LVEPTGSGVGGDLFAIVWSAKDQRLYGLNASGRSPKSLSLEKLKSLGLDYLPPLGPLPVSVPGAVDGWYELHNKFGKLAM AANLAPAIHYARDGFPVSELIAYYLEGSGKKLAKFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKGGRDAFYKGDI AKSIDKYMKSQGGYLSYDDLASHTSDWIEPVSVNYRGYDVWELPPNGQGIAALQILKTMEPFNVAAMGFNSPEYVHLFVE AKKLAFADRAKFYADMAFNKVPVNELISQQYNYDRAKLIDPNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNY RGMGSGMTPPDLGFVLQDRGQMFDLTEGRFNTYAPGKRPFHTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQIVMNLIDF KMNLQEAGDAPRILHMGSTEPTGEVMNDGGYVSLESGFPVETRRELIKKGHVLRDGLGDFGGYQAIGFNAETGVYRAASE SRKDGHAAGY >Mature_570_residues MIKTIKSICTLVTVATAISSSGVMAMDRITGKAFATRSEVYATHGMAATSQPLATQVAIDILKQGGSAVDAAIAANAMLG LVEPTGSGVGGDLFAIVWSAKDQRLYGLNASGRSPKSLSLEKLKSLGLDYLPPLGPLPVSVPGAVDGWYELHNKFGKLAM AANLAPAIHYARDGFPVSELIAYYLEGSGKKLAKFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKGGRDAFYKGDI AKSIDKYMKSQGGYLSYDDLASHTSDWIEPVSVNYRGYDVWELPPNGQGIAALQILKTMEPFNVAAMGFNSPEYVHLFVE AKKLAFADRAKFYADMAFNKVPVNELISQQYNYDRAKLIDPNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNY RGMGSGMTPPDLGFVLQDRGQMFDLTEGRFNTYAPGKRPFHTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQIVMNLIDF KMNLQEAGDAPRILHMGSTEPTGEVMNDGGYVSLESGFPVETRRELIKKGHVLRDGLGDFGGYQAIGFNAETGVYRAASE SRKDGHAAGY
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=562, Percent_Identity=27.9359430604982, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI73915090, Length=562, Percent_Identity=27.9359430604982, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI73915096, Length=562, Percent_Identity=27.9359430604982, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI73915094, Length=562, Percent_Identity=27.9359430604982, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI113429324, Length=556, Percent_Identity=25.8992805755396, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI113429326, Length=561, Percent_Identity=25.8467023172906, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI153266885, Length=557, Percent_Identity=24.4165170556553, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI153266901, Length=558, Percent_Identity=24.3727598566308, Blast_Score=118, Evalue=2e-26, Organism=Homo sapiens, GI109148539, Length=469, Percent_Identity=26.226012793177, Blast_Score=118, Evalue=2e-26, Organism=Homo sapiens, GI153266907, Length=557, Percent_Identity=23.5188509874327, Blast_Score=105, Evalue=1e-22, Organism=Escherichia coli, GI1789856, Length=565, Percent_Identity=31.5044247787611, Blast_Score=233, Evalue=3e-62, Organism=Caenorhabditis elegans, GI193208245, Length=520, Percent_Identity=27.3076923076923, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI193208247, Length=520, Percent_Identity=27.3076923076923, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17542894, Length=498, Percent_Identity=25.9036144578313, Blast_Score=131, Evalue=1e-30, Organism=Caenorhabditis elegans, GI212646519, Length=559, Percent_Identity=25.4025044722719, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI72000294, Length=559, Percent_Identity=25.4025044722719, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17506189, Length=529, Percent_Identity=24.5746691871456, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI161077880, Length=551, Percent_Identity=27.9491833030853, Blast_Score=162, Evalue=7e-40, Organism=Drosophila melanogaster, GI24642670, Length=551, Percent_Identity=27.9491833030853, Blast_Score=162, Evalue=7e-40, Organism=Drosophila melanogaster, GI24642666, Length=551, Percent_Identity=27.9491833030853, Blast_Score=162, Evalue=7e-40, Organism=Drosophila melanogaster, GI161077878, Length=551, Percent_Identity=27.9491833030853, Blast_Score=162, Evalue=8e-40, Organism=Drosophila melanogaster, GI45551474, Length=551, Percent_Identity=27.9491833030853, Blast_Score=162, Evalue=8e-40, Organism=Drosophila melanogaster, GI18859893, Length=461, Percent_Identity=26.0303687635575, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI161077496, Length=555, Percent_Identity=24.8648648648649, Blast_Score=125, Evalue=8e-29, Organism=Drosophila melanogaster, GI18859741, Length=469, Percent_Identity=23.6673773987207, Blast_Score=118, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 61476; Mature: 61476
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTIKSICTLVTVATAISSSGVMAMDRITGKAFATRSEVYATHGMAATSQPLATQVAID CCHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ILKQGGSAVDAAIAANAMLGLVEPTGSGVGGDLFAIVWSAKDQRLYGLNASGRSPKSLSL HHHCCCCHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCH EKLKSLGLDYLPPLGPLPVSVPGAVDGWYELHNKFGKLAMAANLAPAIHYARDGFPVSEL HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IAYYLEGSGKKLAKFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKGGRDAFYKGDI HHHHHCCCCCHHHHCCCCCHHCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCEECCHH AKSIDKYMKSQGGYLSYDDLASHTSDWIEPVSVNYRGYDVWELPPNGQGIAALQILKTME HHHHHHHHHCCCCEECHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCCHHHHHHHHHCC PFNVAAMGFNSPEYVHLFVEAKKLAFADRAKFYADMAFNKVPVNELISQQYNYDRAKLID CCCEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEC PNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNYRGMGSGMTPPDLGFVLQDRG CCHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEHEEHHCCCCCCCCCCCCCCCCEECCCC QMFDLTEGRFNTYAPGKRPFHTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQIVMNLIDF CEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH KMNLQEAGDAPRILHMGSTEPTGEVMNDGGYVSLESGFPVETRRELIKKGHVLRDGLGDF HHCHHHCCCCCEEEECCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHHCCCHHHHCCCCC GGYQAIGFNAETGVYRAASESRKDGHAAGY CCCEEEECCCCCCCEECCHHCCCCCCCCCC >Mature Secondary Structure MIKTIKSICTLVTVATAISSSGVMAMDRITGKAFATRSEVYATHGMAATSQPLATQVAID CCHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ILKQGGSAVDAAIAANAMLGLVEPTGSGVGGDLFAIVWSAKDQRLYGLNASGRSPKSLSL HHHCCCCHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCH EKLKSLGLDYLPPLGPLPVSVPGAVDGWYELHNKFGKLAMAANLAPAIHYARDGFPVSEL HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IAYYLEGSGKKLAKFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKGGRDAFYKGDI HHHHHCCCCCHHHHCCCCCHHCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCEECCHH AKSIDKYMKSQGGYLSYDDLASHTSDWIEPVSVNYRGYDVWELPPNGQGIAALQILKTME HHHHHHHHHCCCCEECHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCCHHHHHHHHHCC PFNVAAMGFNSPEYVHLFVEAKKLAFADRAKFYADMAFNKVPVNELISQQYNYDRAKLID CCCEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEC PNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNYRGMGSGMTPPDLGFVLQDRG CCHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEHEEHHCCCCCCCCCCCCCCCCEECCCC QMFDLTEGRFNTYAPGKRPFHTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQIVMNLIDF CEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH KMNLQEAGDAPRILHMGSTEPTGEVMNDGGYVSLESGFPVETRRELIKKGHVLRDGLGDF HHCHHHCCCCCEEEECCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHHCCCHHHHCCCCC GGYQAIGFNAETGVYRAASESRKDGHAAGY CCCEEEECCCCCCCEECCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]