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The map label for this gene is ytqA [H]

Identifier: 125625316

GI number: 125625316

Start: 2522482

End: 2523423

Strand: Reverse

Name: ytqA [H]

Synonym: llmg_2563

Alternate gene names: 125625316

Gene position: 2523423-2522482 (Counterclockwise)

Preceding gene: NA

Following gene: 125625315

Centisome position: 99.76

GC content: 37.79

Gene sequence:

>942_bases
ATGCAAAAACGATATACAACTTGGAATGAATATTTAAGAAAAAATTTTGGTGAAAAAATATTTAAAGTTCCTATTGATGC
AGGTTTTGATTGTCCTAATCGTGATGGTACTGTAGCACATGGTGGTTGTACTTTTTGTACGGTTTCTGGCTCAGGTGATA
TGATTCTCGAACCAGAAGCACCAATTGCGGATCAATTTGCGGCTGAAGTGACCCAATTTCATAAAAAATGGCCTGGCGTT
AAGAAATATATTGTTTATTTTCAAAATTTCACTAATACACATGCCCCTGTCGAAGTGTTACGTGAACGATTCGAACAAGC
AGTAAATCAACCAGATGTTATCGGAATTTCAATTGGGACACGTCCAGATTGTTTACCGGATGATGTTGTAGAATATTTAG
CAGAGCTTAACCGTCGGATGGAAGTTTGGATTGATTTAGGATTGCAGACCACCTATGAAAAAACTTCTGATATGATTAAT
CGTGCTCATGATTATGAAACTTATGTGGATGCTGTAAGACGTTTACGAGTTCATGGCATTAATGTGTGTACACATTTAAT
TAACGGATTACCAGGTGAAACGACAGAAATGATGTTGGAAAATGTGCGCCGTATGGTTTTAGACTCTGATATTCAAGGGG
TGAAACTACACTTACTCCATTTAATGAAGCAGACTCGCTTGCAGCGTGATTATCATGAGGGAAAATTACAGCTGATGTCA
CAAGAGGAATATGTGCAAGTTATCTGTGATCAGCTGGAGTTGATTCCTAAGGAAATTGTCATTCATCGATTGACTGGGGA
TGCTCCACGTGATTTGATTATTGGACCAATGTGGTCTTTGAAAAAATGGGAAGTATTGAATAGTATTGATGCCGAAATGG
AACGACGCGGTAGTATTCAAGGCTGTAAAGATGTTCGTAAAAGCGGTCTAATTACTTTTTAA

Upstream 100 bases:

>100_bases
GCAGTTTTTTAGAGAGACTTTGAGGTCTCTCTTTTTATTATATTTAAGAAAATAATTGATTTTTTTTGATATAATTTGAT
AAACGGAGAAATTAGATAAA

Downstream 100 bases:

>100_bases
ATTACAAGAGATGAATTTTTATTCATCTCTTTTTGCAAAGTTTGATACAATAATAGTAAGAAGATGGAAAATATTAATGA
CAAACTTATCGGGAATCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MQKRYTTWNEYLRKNFGEKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDMILEPEAPIADQFAAEVTQFHKKWPGV
KKYIVYFQNFTNTHAPVEVLRERFEQAVNQPDVIGISIGTRPDCLPDDVVEYLAELNRRMEVWIDLGLQTTYEKTSDMIN
RAHDYETYVDAVRRLRVHGINVCTHLINGLPGETTEMMLENVRRMVLDSDIQGVKLHLLHLMKQTRLQRDYHEGKLQLMS
QEEYVQVICDQLELIPKEIVIHRLTGDAPRDLIIGPMWSLKKWEVLNSIDAEMERRGSIQGCKDVRKSGLITF

Sequences:

>Translated_313_residues
MQKRYTTWNEYLRKNFGEKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDMILEPEAPIADQFAAEVTQFHKKWPGV
KKYIVYFQNFTNTHAPVEVLRERFEQAVNQPDVIGISIGTRPDCLPDDVVEYLAELNRRMEVWIDLGLQTTYEKTSDMIN
RAHDYETYVDAVRRLRVHGINVCTHLINGLPGETTEMMLENVRRMVLDSDIQGVKLHLLHLMKQTRLQRDYHEGKLQLMS
QEEYVQVICDQLELIPKEIVIHRLTGDAPRDLIIGPMWSLKKWEVLNSIDAEMERRGSIQGCKDVRKSGLITF
>Mature_313_residues
MQKRYTTWNEYLRKNFGEKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDMILEPEAPIADQFAAEVTQFHKKWPGV
KKYIVYFQNFTNTHAPVEVLRERFEQAVNQPDVIGISIGTRPDCLPDDVVEYLAELNRRMEVWIDLGLQTTYEKTSDMIN
RAHDYETYVDAVRRLRVHGINVCTHLINGLPGETTEMMLENVRRMVLDSDIQGVKLHLLHLMKQTRLQRDYHEGKLQLMS
QEEYVQVICDQLELIPKEIVIHRLTGDAPRDLIIGPMWSLKKWEVLNSIDAEMERRGSIQGCKDVRKSGLITF

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=302, Percent_Identity=36.4238410596026, Blast_Score=229, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36055; Mature: 36055

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRYTTWNEYLRKNFGEKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDMILEPEA
CCCCCCHHHHHHHHHHCHHEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCCEEECCCC
PIADQFAAEVTQFHKKWPGVKKYIVYFQNFTNTHAPVEVLRERFEQAVNQPDVIGISIGT
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC
RPDCLPDDVVEYLAELNRRMEVWIDLGLQTTYEKTSDMINRAHDYETYVDAVRRLRVHGI
CCCCCHHHHHHHHHHHHHHHEEEHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVCTHLINGLPGETTEMMLENVRRMVLDSDIQGVKLHLLHLMKQTRLQRDYHEGKLQLMS
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QEEYVQVICDQLELIPKEIVIHRLTGDAPRDLIIGPMWSLKKWEVLNSIDAEMERRGSIQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCC
GCKDVRKSGLITF
HHHHHHHCCCCCC
>Mature Secondary Structure
MQKRYTTWNEYLRKNFGEKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDMILEPEA
CCCCCCHHHHHHHHHHCHHEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCCEEECCCC
PIADQFAAEVTQFHKKWPGVKKYIVYFQNFTNTHAPVEVLRERFEQAVNQPDVIGISIGT
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCC
RPDCLPDDVVEYLAELNRRMEVWIDLGLQTTYEKTSDMINRAHDYETYVDAVRRLRVHGI
CCCCCHHHHHHHHHHHHHHHEEEHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVCTHLINGLPGETTEMMLENVRRMVLDSDIQGVKLHLLHLMKQTRLQRDYHEGKLQLMS
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QEEYVQVICDQLELIPKEIVIHRLTGDAPRDLIIGPMWSLKKWEVLNSIDAEMERRGSIQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCC
GCKDVRKSGLITF
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]