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The map label for this gene is ytqB [H]

Identifier: 125625315

GI number: 125625315

Start: 2521703

End: 2522338

Strand: Reverse

Name: ytqB [H]

Synonym: llmg_2562

Alternate gene names: 125625315

Gene position: 2522338-2521703 (Counterclockwise)

Preceding gene: 125625316

Following gene: 125625314

Centisome position: 99.72

GC content: 39.47

Gene sequence:

>636_bases
ATGTTAAAACAGATAGAAATGGCCCACTGGATGTTGAAAGACATCATAAATGTTGATGATGTTGTGGTAGATGCAACGAT
GGGAAATGGCTATGATACGCTTTTTTTAGCAGAATTAGGAGCAAAGGTCTATGCTTTTGATGTACAAGAGGCAGCCCTAG
AAGCAACAGAAAAGCGTTTAGAAAACAAAGCAATAAAGACGCAAATAGTGAAAAAAGCTTCTCCAGTTGACCAGTCTAGC
CTACCACCAAAGGAACAGGCTTTCAATGGAGTTTCTATGACAGAGCCGTCAGTAGACTTGATTTTGGCTGGGCATGAAGA
ACTGATTAATTACGTTCAAAGTCCGGTTAAAGCTGCTATCTTTAACCTTGGTTATCTACCTAAAACGGATAAAAATATAG
TTACAAGGGCAGAAACGACTCTGTCAGCATTATCGTCCCTGACAGATTTGTTGGTTGTGGGTGGTAGGATTGCGCTTGTT
ATTTATTACGGTCATGAAGGAGGAGAGGAAGAAAAAGATGCCGTTATTAAGTGGACTTCTACTTTGCCACAAAAGGACTG
GGAAGTGACTTCTTATGCACCTCTTAACCAAATTCATACGCCGCCAATTTTAGTTCTAATTGAAAAAAGAAAATAA

Upstream 100 bases:

>100_bases
GATACAATAATAGTAAGAAGATGGAAAATATTAATGACAAACTTATCGGGAATCTCTTAAATTGGTATATAAAAATAATT
AGAAAGTGATGAGTAAATAG

Downstream 100 bases:

>100_bases
ATTTACTTGAACAGTTATGAATCTTATGTATTCTTTTATCTCTTGTTTTTTCCAAAAAAAAGAGTAAAATAGAGAAATGC
TTAATTTTTAAGTAAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLKQIEMAHWMLKDIINVDDVVVDATMGNGYDTLFLAELGAKVYAFDVQEAALEATEKRLENKAIKTQIVKKASPVDQSS
LPPKEQAFNGVSMTEPSVDLILAGHEELINYVQSPVKAAIFNLGYLPKTDKNIVTRAETTLSALSSLTDLLVVGGRIALV
IYYGHEGGEEEKDAVIKWTSTLPQKDWEVTSYAPLNQIHTPPILVLIEKRK

Sequences:

>Translated_211_residues
MLKQIEMAHWMLKDIINVDDVVVDATMGNGYDTLFLAELGAKVYAFDVQEAALEATEKRLENKAIKTQIVKKASPVDQSS
LPPKEQAFNGVSMTEPSVDLILAGHEELINYVQSPVKAAIFNLGYLPKTDKNIVTRAETTLSALSSLTDLLVVGGRIALV
IYYGHEGGEEEKDAVIKWTSTLPQKDWEVTSYAPLNQIHTPPILVLIEKRK
>Mature_211_residues
MLKQIEMAHWMLKDIINVDDVVVDATMGNGYDTLFLAELGAKVYAFDVQEAALEATEKRLENKAIKTQIVKKASPVDQSS
LPPKEQAFNGVSMTEPSVDLILAGHEELINYVQSPVKAAIFNLGYLPKTDKNIVTRAETTLSALSSLTDLLVVGGRIALV
IYYGHEGGEEEKDAVIKWTSTLPQKDWEVTSYAPLNQIHTPPILVLIEKRK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 23336; Mature: 23336

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQIEMAHWMLKDIINVDDVVVDATMGNGYDTLFLAELGAKVYAFDVQEAALEATEKRL
CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHCCEEEEEHHHHHHHHHHHHHH
ENKAIKTQIVKKASPVDQSSLPPKEQAFNGVSMTEPSVDLILAGHEELINYVQSPVKAAI
HHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHH
FNLGYLPKTDKNIVTRAETTLSALSSLTDLLVVGGRIALVIYYGHEGGEEEKDAVIKWTS
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEECC
TLPQKDWEVTSYAPLNQIHTPPILVLIEKRK
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MLKQIEMAHWMLKDIINVDDVVVDATMGNGYDTLFLAELGAKVYAFDVQEAALEATEKRL
CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHCCEEEEEHHHHHHHHHHHHHH
ENKAIKTQIVKKASPVDQSSLPPKEQAFNGVSMTEPSVDLILAGHEELINYVQSPVKAAI
HHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHH
FNLGYLPKTDKNIVTRAETTLSALSSLTDLLVVGGRIALVIYYGHEGGEEEKDAVIKWTS
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEECC
TLPQKDWEVTSYAPLNQIHTPPILVLIEKRK
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]