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The map label for this gene is rsgA [H]

Identifier: 125624960

GI number: 125624960

Start: 2157265

End: 2158188

Strand: Reverse

Name: rsgA [H]

Synonym: llmg_2193

Alternate gene names: 125624960

Gene position: 2158188-2157265 (Counterclockwise)

Preceding gene: 125624961

Following gene: 125624959

Centisome position: 85.32

GC content: 35.71

Gene sequence:

>924_bases
ATGATAAAAAATGGACGTATTGTCAAATCCTTGGCAGGCTTTTATGATGTCGAGGCAGAAGGTGAAGTTTATCAGACGCG
CGCGCGTGGTAATTTCAGAAAAAAAGGAATGAAACCTGTTGTAGGGGATTTTGTTGAGTTTTCTGCTGAAGAAAATTCAG
AAGGATATATTCTAAAAATTGGTGAGCAAAAAAATTCTTTAATTCGACCATCAATTGCTAATATTGACCAAGCGGTGATT
ATTATGTCAACGGTAAGTCCTAATTTTAGTTTAAATCTCTTGGACCGTTTTTTGGTTTTCTTAGAACATAAAAACATTCA
TCCAATGATTTATATATCTAAAATGGATGTGCTGACAGAAGACCAAGGGAGTTCTGAGAAAAGTAATAAAACTTTTAATC
AGCGGGCAGATTATGAGCAGATAAAAAGGAATTATGAACAGATTGGTTATGATGTCTTCTTTGATGCTGAACATTTGGTC
AGTAATTTAGCGGGAAAAGTAACTGTTTTTATGGGACAAACTGGTGCTGGAAAAACCACTTTATTAAATAAAATTGCACC
GGAAATGCAGTTGGCAACGGGTGAAACTTCAGAAAAGCTAGGGCGTGGACGACATACAACTCGCCATGTTGAATTTTTTG
AGTTAGCGGGTGGATTAATTGCTGATACGCCAGGGTTTTCCAGTTTAGATTATGAGGTAACCAATCAGCCAGATTTAAAC
GCTGCTTTTCCAGAAATTTTAAAGATTAGTCATAATTGTAGATTCAGAGAATGTACACATACGCATGAACCAAGCTGTGC
GGTTAAAGTTGCACTTGAAAATCATGAAATTTTAGAAAGCCGTTATGAAAATTACTTACAGCTTTTAGATGAAATCAACC
ATACGAGGGAAACTTATGAGAAAAAACGAAAAAAACAAGGCTAA

Upstream 100 bases:

>100_bases
TTGGGGACGTAAAAATATTCAAATCACTGTTTTGAGTTAAAAAAACTTTAAAAAATAATGAAAGGCTTACAGTTAAGCCT
TTTTTTGGTATAATGAGAAC

Downstream 100 bases:

>100_bases
AGATAATATTTGGTTGAAACAGGCTGGTTTTTTTGCCCTTGTTTTAGCTTGGATTTTAGCAATTTATTTTAAAAATGACT
TATCCAAAACAATAATGATT

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MIKNGRIVKSLAGFYDVEAEGEVYQTRARGNFRKKGMKPVVGDFVEFSAEENSEGYILKIGEQKNSLIRPSIANIDQAVI
IMSTVSPNFSLNLLDRFLVFLEHKNIHPMIYISKMDVLTEDQGSSEKSNKTFNQRADYEQIKRNYEQIGYDVFFDAEHLV
SNLAGKVTVFMGQTGAGKTTLLNKIAPEMQLATGETSEKLGRGRHTTRHVEFFELAGGLIADTPGFSSLDYEVTNQPDLN
AAFPEILKISHNCRFRECTHTHEPSCAVKVALENHEILESRYENYLQLLDEINHTRETYEKKRKKQG

Sequences:

>Translated_307_residues
MIKNGRIVKSLAGFYDVEAEGEVYQTRARGNFRKKGMKPVVGDFVEFSAEENSEGYILKIGEQKNSLIRPSIANIDQAVI
IMSTVSPNFSLNLLDRFLVFLEHKNIHPMIYISKMDVLTEDQGSSEKSNKTFNQRADYEQIKRNYEQIGYDVFFDAEHLV
SNLAGKVTVFMGQTGAGKTTLLNKIAPEMQLATGETSEKLGRGRHTTRHVEFFELAGGLIADTPGFSSLDYEVTNQPDLN
AAFPEILKISHNCRFRECTHTHEPSCAVKVALENHEILESRYENYLQLLDEINHTRETYEKKRKKQG
>Mature_307_residues
MIKNGRIVKSLAGFYDVEAEGEVYQTRARGNFRKKGMKPVVGDFVEFSAEENSEGYILKIGEQKNSLIRPSIANIDQAVI
IMSTVSPNFSLNLLDRFLVFLEHKNIHPMIYISKMDVLTEDQGSSEKSNKTFNQRADYEQIKRNYEQIGYDVFFDAEHLV
SNLAGKVTVFMGQTGAGKTTLLNKIAPEMQLATGETSEKLGRGRHTTRHVEFFELAGGLIADTPGFSSLDYEVTNQPDLN
AAFPEILKISHNCRFRECTHTHEPSCAVKVALENHEILESRYENYLQLLDEINHTRETYEKKRKKQG

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=316, Percent_Identity=30.379746835443, Blast_Score=138, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 34864; Mature: 34864

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNGRIVKSLAGFYDVEAEGEVYQTRARGNFRKKGMKPVVGDFVEFSAEENSEGYILKI
CCCCCHHHHHHHHHCCCCCCCCEEEHHHCCCHHHCCCCCHHHHHHHHCCCCCCCCEEEEE
GEQKNSLIRPSIANIDQAVIIMSTVSPNFSLNLLDRFLVFLEHKNIHPMIYISKMDVLTE
CCCCCCCCCCCHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCEEEC
DQGSSEKSNKTFNQRADYEQIKRNYEQIGYDVFFDAEHLVSNLAGKVTVFMGQTGAGKTT
CCCCCCCCCCCHHHCCCHHHHHHHHHHCCCEEEECHHHHHHHCCCEEEEEEECCCCCHHH
LLNKIAPEMQLATGETSEKLGRGRHTTRHVEFFELAGGLIADTPGFSSLDYEVTNQPDLN
HHHHHCCCCEECCCCCHHHHCCCCCCHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCC
AAFPEILKISHNCRFRECTHTHEPSCAVKVALENHEILESRYENYLQLLDEINHTRETYE
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
KKRKKQG
HHHHCCC
>Mature Secondary Structure
MIKNGRIVKSLAGFYDVEAEGEVYQTRARGNFRKKGMKPVVGDFVEFSAEENSEGYILKI
CCCCCHHHHHHHHHCCCCCCCCEEEHHHCCCHHHCCCCCHHHHHHHHCCCCCCCCEEEEE
GEQKNSLIRPSIANIDQAVIIMSTVSPNFSLNLLDRFLVFLEHKNIHPMIYISKMDVLTE
CCCCCCCCCCCHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCEEEC
DQGSSEKSNKTFNQRADYEQIKRNYEQIGYDVFFDAEHLVSNLAGKVTVFMGQTGAGKTT
CCCCCCCCCCCHHHCCCHHHHHHHHHHCCCEEEECHHHHHHHCCCEEEEEEECCCCCHHH
LLNKIAPEMQLATGETSEKLGRGRHTTRHVEFFELAGGLIADTPGFSSLDYEVTNQPDLN
HHHHHCCCCEECCCCCHHHHCCCCCCHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCC
AAFPEILKISHNCRFRECTHTHEPSCAVKVALENHEILESRYENYLQLLDEINHTRETYE
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
KKRKKQG
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]