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The map label for this gene is yadS [H]

Identifier: 125624938

GI number: 125624938

Start: 2136110

End: 2136769

Strand: Reverse

Name: yadS [H]

Synonym: llmg_2168

Alternate gene names: 125624938

Gene position: 2136769-2136110 (Counterclockwise)

Preceding gene: 125624939

Following gene: 125624937

Centisome position: 84.47

GC content: 34.39

Gene sequence:

>660_bases
ATGGAAGTGATAAGCAGTTTTTACTTGTTTTTAGAAATTTTAGGGACAGTGGCATTTGCCATTTCGGGAACAGTAGTCGG
GATTAACCATAAATTGGATGTTTTTGGAGTGCTCGTAATGTCAGTTATTACAGCGGTAGGAGGAGGAATCTTTCGTGATT
TGCTTTTGGGAGCGACTCCGCCTTCAGCATTGAAATCACCATTTTTTATTATAATTTCTATAATTGCTTCTATAATAGCC
ATGTTTGTTGCTTGGATTGTAAAATCTAAAAGAAATGCCTTGAATATTTTTAAAGCGGCTCGCTTCTATAATAATCTTCT
CTTGGTTTCAGATGCAATCGGTTTGGGAATATTTACCGTATTAGGAATTGATGCAGGAATAGCCCATGGTTATTCTCAAA
ATATATTTTTTATTGTATTTTTAGGAGTACTGACAGGTGTTGGTGGCGGAATGATTCGAGATATCATCGCTAATCAGGTC
CCAATGATTTTTAGAGAAAATATCTACGCTTTGCCTTGTATAATAGGAGGAATTCTTTATGTATACCTCCAATCAGAAAT
TAGTCACAACCTCTCATTATTCATCTCTGTCATTTTTATCGTACTTGTTCGTATAATATCAGAACAAAAGAAGCTAAATT
TACCAAGAATTGAATATTAA

Upstream 100 bases:

>100_bases
AAAAAGACTGTTGAAAAATAGTCTTTTTTTATACTGTTGTATCAATATAAGGTATAATAAATGGTATTAAAATGACAATA
AGGATAGAATAAAGAGAAAT

Downstream 100 bases:

>100_bases
ATAAAGGTTAAGAACTTGATAACCATAGGCTTTGTCGGACGAAGATAAAAAAAGATTGAAAAATTGACAGTTAATTCTTG
ACAGGGAGAGATAGGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MEVISSFYLFLEILGTVAFAISGTVVGINHKLDVFGVLVMSVITAVGGGIFRDLLLGATPPSALKSPFFIIISIIASIIA
MFVAWIVKSKRNALNIFKAARFYNNLLLVSDAIGLGIFTVLGIDAGIAHGYSQNIFFIVFLGVLTGVGGGMIRDIIANQV
PMIFRENIYALPCIIGGILYVYLQSEISHNLSLFISVIFIVLVRIISEQKKLNLPRIEY

Sequences:

>Translated_219_residues
MEVISSFYLFLEILGTVAFAISGTVVGINHKLDVFGVLVMSVITAVGGGIFRDLLLGATPPSALKSPFFIIISIIASIIA
MFVAWIVKSKRNALNIFKAARFYNNLLLVSDAIGLGIFTVLGIDAGIAHGYSQNIFFIVFLGVLTGVGGGMIRDIIANQV
PMIFRENIYALPCIIGGILYVYLQSEISHNLSLFISVIFIVLVRIISEQKKLNLPRIEY
>Mature_219_residues
MEVISSFYLFLEILGTVAFAISGTVVGINHKLDVFGVLVMSVITAVGGGIFRDLLLGATPPSALKSPFFIIISIIASIIA
MFVAWIVKSKRNALNIFKAARFYNNLLLVSDAIGLGIFTVLGIDAGIAHGYSQNIFFIVFLGVLTGVGGGMIRDIIANQV
PMIFRENIYALPCIIGGILYVYLQSEISHNLSLFISVIFIVLVRIISEQKKLNLPRIEY

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=208, Percent_Identity=35.0961538461538, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87082304, Length=188, Percent_Identity=30.8510638297872, Blast_Score=95, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 23859; Mature: 23859

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVISSFYLFLEILGTVAFAISGTVVGINHKLDVFGVLVMSVITAVGGGIFRDLLLGATP
CHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCC
PSALKSPFFIIISIIASIIAMFVAWIVKSKRNALNIFKAARFYNNLLLVSDAIGLGIFTV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIDAGIAHGYSQNIFFIVFLGVLTGVGGGMIRDIIANQVPMIFRENIYALPCIIGGILY
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHH
VYLQSEISHNLSLFISVIFIVLVRIISEQKKLNLPRIEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEVISSFYLFLEILGTVAFAISGTVVGINHKLDVFGVLVMSVITAVGGGIFRDLLLGATP
CHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCC
PSALKSPFFIIISIIASIIAMFVAWIVKSKRNALNIFKAARFYNNLLLVSDAIGLGIFTV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIDAGIAHGYSQNIFFIVFLGVLTGVGGGMIRDIIANQVPMIFRENIYALPCIIGGILY
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHH
VYLQSEISHNLSLFISVIFIVLVRIISEQKKLNLPRIEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA